RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 CRIP1P50238 77 aa6.08□□□□□ -1.44
TMEM39A-202ENST00000438581 IGLL5B9A064 214 aa6.08□□□□□ -1.44
TMEM39A-202ENST00000438581 ZNF493Q6ZR52 646 aa6.08□□□□□ -1.44
TMEM39A-202ENST00000438581 FAM236AA0A1B0GUQ0 79 aa6.07□□□□□ -1.44
TMEM39A-202ENST00000438581 FAM236BA0A1B0GV22 79 aa6.07□□□□□ -1.44
TMEM39A-202ENST00000438581 H3BMM0 161 aa6.07□□□□□ -1.44
TMEM39A-202ENST00000438581 LGALS9O00182 355 aa6.07□□□□□ -1.44
TMEM39A-202ENST00000438581 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
TMEM39A-202ENST00000438581 AGRNO00468 2067 aa6.07□□□□□ -1.44
TMEM39A-202ENST00000438581 MGAM2Q2M2H8 2515 aa6.07□□□□□ -1.44
TMEM39A-202ENST00000438581 TRBV6-1A0A0K0K1D8 114 aa6.07□□□□□ -1.44
TMEM39A-202ENST00000438581 DMDP11532 3685 aa6.07□□□□□ -1.44
TMEM39A-202ENST00000438581 F8VRH5 84 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 RHOHQ15669 191 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 CFAP126Q5VTH2 177 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 FREM2Q5SZK8 3169 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 TRAV4A0A0B4J268 109 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 SS18Q15532 418 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 MAST4O15021 2626 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 MUC3AQ02505 3323 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 NDUFC1O43677 76 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 DNAL4O96015 105 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 TMEM141Q96I45 108 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 IGLV2-11P01706 119 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 ANGP03950 147 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 RPL39P62891 51 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 MRGPRG-AS1Q2M3A8 158 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 LGALS9BQ3B8N2 356 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 LGALS9CQ6DKI2 356 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 NDUFA11Q86Y39 141 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 PRR15Q8IV56 129 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 ZFAND2AQ8N6M9 145 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 LINC00482Q8N8I6 264 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 WFDC10AQ9H1F0 79 aa6.06□□□□□ -1.44
TMEM39A-202ENST00000438581 F8W735 103 aaPredicted RBP6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 C16orf74Q96GX8 76 aa6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 TEP1Q99973 2627 aaKnown RBP6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 TRBV7-6A0A0J9YX20 115 aa6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 H3BT86 120 aa6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 PRM2P04554 102 aa6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 GYPEP15421 78 aa6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 Q6ZQT7 251 aa6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 LINC00643Q86TS7 51 aa6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 BOD1L1Q8NFC6 3051 aa6.05□□□□□ -1.44
TMEM39A-202ENST00000438581 A0A1B0GXF2 115 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 SH2D6Q7Z4S9 175 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 FGF6P10767 208 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 ZFP2Q6ZN57 461 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 SPART-AS1P0CW21 52 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 INSL3P51460 131 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 IGHV1-58A0A0C4DH39 117 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 MYMXA0A1B0GTQ4 84 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 PLAC8L1A1L4L8 177 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 Q6ZTI0 123 aa6.04□□□□□ -1.44
TMEM39A-202ENST00000438581 PRR9Q5T870 116 aa6.03□□□□□ -1.44
TMEM39A-202ENST00000438581 PSCAO43653 123 aa6.03□□□□□ -1.44
TMEM39A-202ENST00000438581 SERP2Q8N6R1 65 aa6.03□□□□□ -1.44
TMEM39A-202ENST00000438581 C11orf21Q9P2W6 132 aa6.03□□□□□ -1.44
TMEM39A-202ENST00000438581 Q9UF83 564 aa6.03□□□□□ -1.44
TMEM39A-202ENST00000438581 BCE1O60756 84 aa6.03□□□□□ -1.44
TMEM39A-202ENST00000438581 A0A0J9YXV3 536 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 SBSPONQ8IVN8 264 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 IGSF10Q6WRI0 2623 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 XCL1P47992 114 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 PCP2Q8IVA1 136 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 UBE2WQ96B02 151 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 FRYQ5TBA9 3013 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 K7EQD1 137 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 GHRHP01286 108 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 Q5XG85 94 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 Q6ZRU5 148 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 DCANP1Q8TF63 244 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 TMEM263Q8WUH6 116 aaKnown RBP6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 TTTY13Q9BZ97 58 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 NDUFA12Q9UI09 145 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 DMXL2Q8TDJ6 3036 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 IGLV10-54A0A075B6I4 117 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 C5orf38Q86SI9 138 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 HHLA3Q9XRX5 114 aa6.02□□□□□ -1.45
TMEM39A-202ENST00000438581 NXPH4O95158 308 aa6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 MED14OSP0DP75 135 aa6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 S100A7L2Q5SY68 101 aa6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 TRBV7-3A0A075B6L6 115 aa6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 MRPS12O15235 138 aaKnown RBP6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 LINC01600Q96MT4 127 aa6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 OPRPNQ99935 248 aaPredicted RBP6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 PRO0461Q9UI25 63 aa6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 RBMY1BA6NDE4 496 aaKnown RBP6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 RBMY1EA6NEQ0 496 aaKnown RBP6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 RBMY1DP0C7P1 496 aaKnown RBP6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 RBMY1A1P0DJD3 496 aaKnown RBP6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 RBMY1CP0DJD4 496 aa6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 C2orf91Q6ZV80 131 aa6.01□□□□□ -1.45
TMEM39A-202ENST00000438581 CEMP1Q6PRD7 247 aaPredicted RBP6□□□□□ -1.45
TMEM39A-202ENST00000438581 VSIG2Q96IQ7 327 aa6□□□□□ -1.45
TMEM39A-202ENST00000438581 Q9HAA7 133 aa6□□□□□ -1.45
TMEM39A-202ENST00000438581 ATXN8Q156A1 80 aa6□□□□□ -1.45
TMEM39A-202ENST00000438581 CHD6Q8TD26 2715 aa6□□□□□ -1.45
TMEM39A-202ENST00000438581 K7EMI3 77 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms