RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 PRR34Q9NV39 138 aa12.43□□□□□ -0.42
HDAC6-208ENST00000438518 KLK12Q9UKR0 248 aa12.43□□□□□ -0.42
HDAC6-208ENST00000438518 KMT2CQ8NEZ4 4911 aaKnown RBP12.42□□□□□ -0.42
HDAC6-208ENST00000438518 DNAH6Q9C0G6 4158 aa12.42□□□□□ -0.42
HDAC6-208ENST00000438518 IGLV4-60A0A075B6I1 120 aa12.42□□□□□ -0.42
HDAC6-208ENST00000438518 PAPPA-AS1Q5QFB9 102 aa12.42□□□□□ -0.42
HDAC6-208ENST00000438518 Q8N3U1 123 aa12.42□□□□□ -0.42
HDAC6-208ENST00000438518 TIMM17AQ99595 171 aa12.42□□□□□ -0.42
HDAC6-208ENST00000438518 CDC42SE2Q9NRR3 84 aa12.42□□□□□ -0.42
HDAC6-208ENST00000438518 MIAQ16674 131 aa12.41□□□□□ -0.42
HDAC6-208ENST00000438518 ERASQ7Z444 233 aa12.41□□□□□ -0.42
HDAC6-208ENST00000438518 ZNF664Q8N3J9 261 aa12.41□□□□□ -0.42
HDAC6-208ENST00000438518 KRTAP1-5Q9BYS1 174 aa12.41□□□□□ -0.42
HDAC6-208ENST00000438518 SERF1AO75920 110 aa12.4□□□□□ -0.42
HDAC6-208ENST00000438518 REG3AQ06141 175 aa12.4□□□□□ -0.42
HDAC6-208ENST00000438518 LINC00269Q8N2A0 174 aa12.4□□□□□ -0.42
HDAC6-208ENST00000438518 RMI2Q96E14 147 aa12.4□□□□□ -0.42
HDAC6-208ENST00000438518 TMEM141Q96I45 108 aa12.4□□□□□ -0.42
HDAC6-208ENST00000438518 COX11Q9Y6N1 276 aa12.4□□□□□ -0.42
HDAC6-208ENST00000438518 HYDINQ4G0P3 5121 aa12.4□□□□□ -0.42
HDAC6-208ENST00000438518 TRAV8-4A0A0B4J246 113 aa12.39□□□□□ -0.43
HDAC6-208ENST00000438518 M0R2N4 97 aa12.39□□□□□ -0.43
HDAC6-208ENST00000438518 CCL25O15444 150 aa12.39□□□□□ -0.43
HDAC6-208ENST00000438518 COA6Q5JTJ3 125 aaKnown RBP12.39□□□□□ -0.43
HDAC6-208ENST00000438518 Q6ZN92 141 aa12.39□□□□□ -0.43
HDAC6-208ENST00000438518 UBE2WQ96B02 151 aa12.39□□□□□ -0.43
HDAC6-208ENST00000438518 A0A096LNJ9 63 aa12.38□□□□□ -0.43
HDAC6-208ENST00000438518 IGIPA6NJ69 53 aa12.38□□□□□ -0.43
HDAC6-208ENST00000438518 C6orf223Q8N319 242 aa12.38□□□□□ -0.43
HDAC6-208ENST00000438518 SCGB3A1Q96QR1 104 aa12.38□□□□□ -0.43
HDAC6-208ENST00000438518 IGLV4-3A0A075B6K6 122 aa12.37□□□□□ -0.43
HDAC6-208ENST00000438518 C1orf134Q5TEV5 83 aa12.37□□□□□ -0.43
HDAC6-208ENST00000438518 ENHOQ6UWT2 76 aa12.37□□□□□ -0.43
HDAC6-208ENST00000438518 TM2D2Q9BX73 214 aa12.37□□□□□ -0.43
HDAC6-208ENST00000438518 KMT2AQ03164 3969 aa12.37□□□□□ -0.43
HDAC6-208ENST00000438518 ATP5LO75964 103 aa12.36□□□□□ -0.43
HDAC6-208ENST00000438518 LINC00310P59036 64 aa12.36□□□□□ -0.43
HDAC6-208ENST00000438518 Q6ZUT4 128 aa12.36□□□□□ -0.43
HDAC6-208ENST00000438518 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-208ENST00000438518 PDZD11Q5EBL8 140 aa12.35□□□□□ -0.43
HDAC6-208ENST00000438518 TEX43Q6ZNM6 134 aa12.35□□□□□ -0.43
HDAC6-208ENST00000438518 C2orf88Q9BSF0 95 aa12.35□□□□□ -0.43
HDAC6-208ENST00000438518 C1orf43Q9BWL3 253 aa12.35□□□□□ -0.43
HDAC6-208ENST00000438518 RYR2Q92736 4967 aa12.34□□□□□ -0.43
HDAC6-208ENST00000438518 PMCHL1Q16048 86 aa12.34□□□□□ -0.43
HDAC6-208ENST00000438518 VCX2Q9H322 139 aa12.34□□□□□ -0.43
HDAC6-208ENST00000438518 Q9HAA7 133 aa12.34□□□□□ -0.43
HDAC6-208ENST00000438518 SS18Q15532 418 aa12.33□□□□□ -0.44
HDAC6-208ENST00000438518 CLPSL2Q6UWE3 100 aa12.33□□□□□ -0.44
HDAC6-208ENST00000438518 FAM104AQ969W3 186 aa12.33□□□□□ -0.44
HDAC6-208ENST00000438518 PACRGQ96M98 296 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-208ENST00000438518 AMELXQ99217 191 aa12.33□□□□□ -0.44
HDAC6-208ENST00000438518 LINC00959A0A1B0GUT2 108 aa12.32□□□□□ -0.44
HDAC6-208ENST00000438518 NDUFA6P56556 154 aa12.32□□□□□ -0.44
HDAC6-208ENST00000438518 IGKV2D-24A0A075B6R9 120 aa12.31□□□□□ -0.44
HDAC6-208ENST00000438518 IFITM10A6NMD0 228 aa12.31□□□□□ -0.44
HDAC6-208ENST00000438518 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
HDAC6-208ENST00000438518 FAM19A2Q8N3H0 131 aa12.31□□□□□ -0.44
HDAC6-208ENST00000438518 NUPR1O60356 82 aa12.3□□□□□ -0.44
HDAC6-208ENST00000438518 S100A6P06703 90 aa12.3□□□□□ -0.44
HDAC6-208ENST00000438518 Q6ZRN7 208 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-208ENST00000438518 OPRPNQ99935 248 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-208ENST00000438518 HSPB8Q9UJY1 196 aa12.3□□□□□ -0.44
HDAC6-208ENST00000438518 DNAH2Q9P225 4427 aa12.29□□□□□ -0.44
HDAC6-208ENST00000438518 IGKV3OR2-268A0A0C4DH90 116 aa12.29□□□□□ -0.44
HDAC6-208ENST00000438518 PSCAO43653 123 aa12.29□□□□□ -0.44
HDAC6-208ENST00000438518 PMVKQ15126 192 aa12.29□□□□□ -0.44
HDAC6-208ENST00000438518 RNASE13Q5GAN3 156 aaKnown RBP12.29□□□□□ -0.44
HDAC6-208ENST00000438518 BAALCQ8WXS3 180 aa12.29□□□□□ -0.44
HDAC6-208ENST00000438518 SEC11AP67812 179 aa12.28□□□□□ -0.44
HDAC6-208ENST00000438518 LINC00173Q6ZV60 143 aa12.28□□□□□ -0.44
HDAC6-208ENST00000438518 CHCHD10Q8WYQ3 142 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-208ENST00000438518 IFI27L1Q96BM0 104 aa12.28□□□□□ -0.44
HDAC6-208ENST00000438518 TRAV13-1A0A0B4J241 112 aa12.27□□□□□ -0.45
HDAC6-208ENST00000438518 LINC00336Q6ZUF6 198 aa12.27□□□□□ -0.45
HDAC6-208ENST00000438518 FAM19A3Q7Z5A8 133 aa12.27□□□□□ -0.45
HDAC6-208ENST00000438518 IGLV10-54A0A075B6I4 117 aa12.26□□□□□ -0.45
HDAC6-208ENST00000438518 UBE2D1P51668 147 aa12.26□□□□□ -0.45
HDAC6-208ENST00000438518 CD164L2Q6UWJ8 174 aa12.26□□□□□ -0.45
HDAC6-208ENST00000438518 KRTAP26-1Q6PEX3 210 aa12.25□□□□□ -0.45
HDAC6-208ENST00000438518 CST9LQ9H4G1 147 aa12.25□□□□□ -0.45
HDAC6-208ENST00000438518 TRAV12-1A0A0B4J245 112 aa12.24□□□□□ -0.45
HDAC6-208ENST00000438518 RTL8CO15255 209 aa12.24□□□□□ -0.45
HDAC6-208ENST00000438518 PRSS1P07477 247 aa12.24□□□□□ -0.45
HDAC6-208ENST00000438518 XCL1P47992 114 aa12.23□□□□□ -0.45
HDAC6-208ENST00000438518 HERVK_113P63121 156 aa12.23□□□□□ -0.45
HDAC6-208ENST00000438518 RYR3Q15413 4870 aa12.23□□□□□ -0.45
HDAC6-208ENST00000438518 GAGE12HA6NDE8 117 aa12.22□□□□□ -0.45
HDAC6-208ENST00000438518 FABP4P15090 132 aa12.22□□□□□ -0.45
HDAC6-208ENST00000438518 FOXI1Q12951 378 aa12.22□□□□□ -0.45
HDAC6-208ENST00000438518 LINC00242Q5T6M2 205 aa12.22□□□□□ -0.45
HDAC6-208ENST00000438518 MAP1LC3CQ9BXW4 147 aa12.22□□□□□ -0.45
HDAC6-208ENST00000438518 TINCRA0A1B0GVN0 87 aa12.21□□□□□ -0.45
HDAC6-208ENST00000438518 PRSS29PA6NIE9 313 aa12.21□□□□□ -0.45
HDAC6-208ENST00000438518 DNAH10Q8IVF4 4471 aa12.2□□□□□ -0.46
HDAC6-208ENST00000438518 DNAH17Q9UFH2 4485 aa12.2□□□□□ -0.46
HDAC6-208ENST00000438518 IGHV3OR16-9A0A0B4J2B5 98 aa12.2□□□□□ -0.46
HDAC6-208ENST00000438518 S100A2P29034 98 aa12.2□□□□□ -0.46
HDAC6-208ENST00000438518 ZC2HC1BQ5TFG8 222 aa12.2□□□□□ -0.46
HDAC6-208ENST00000438518 GEMIN7Q9H840 131 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms