RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 Q8N976 141 aa8.72□□□□□ -1.01
PTCH1-209ENST00000437951 LRP4O75096 1905 aa8.71□□□□□ -1.01
PTCH1-209ENST00000437951 LOC107984640A0A0U1RRK4 108 aa8.71□□□□□ -1.01
PTCH1-209ENST00000437951 C1orf158Q8N1D5 194 aa8.71□□□□□ -1.01
PTCH1-209ENST00000437951 MBD6Q96DN6 1003 aa8.71□□□□□ -1.02
PTCH1-209ENST00000437951 LINC00467Q9BRT7 94 aa8.71□□□□□ -1.02
PTCH1-209ENST00000437951 SLPIP03973 132 aa8.71□□□□□ -1.02
PTCH1-209ENST00000437951 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.02
PTCH1-209ENST00000437951 GDF5OSQ5U4N7 250 aa8.71□□□□□ -1.02
PTCH1-209ENST00000437951 Q8N9W7 124 aa8.71□□□□□ -1.02
PTCH1-209ENST00000437951 M0R378 163 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 CHCHD10Q8WYQ3 142 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-209ENST00000437951 SPRY2O43597 315 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 C3orf84H3BNL1 204 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 MAPKAPK5-AS1Q8N8E1 139 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 IGLV2-14P01704 120 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 FAM19A1Q7Z5A9 133 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 UBE2D3P61077 147 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 CCDC140Q96MF4 163 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 HIGD2AQ9BW72 106 aa8.7□□□□□ -1.02
PTCH1-209ENST00000437951 CTSZQ9UBR2 303 aa8.69□□□□□ -1.02
PTCH1-209ENST00000437951 MYCNOSP40205 109 aa8.69□□□□□ -1.02
PTCH1-209ENST00000437951 LINC00269Q8N2A0 174 aa8.69□□□□□ -1.02
PTCH1-209ENST00000437951 PRSS33Q8NF86 280 aa8.69□□□□□ -1.02
PTCH1-209ENST00000437951 FAM30AQ9NZY2 134 aa8.69□□□□□ -1.02
PTCH1-209ENST00000437951 C6orf99Q4VX62 202 aa8.69□□□□□ -1.02
PTCH1-209ENST00000437951 ANKHD1Q8IWZ3 2542 aaKnown RBP8.69□□□□□ -1.02
PTCH1-209ENST00000437951 SIRPDQ9H106 197 aa8.68□□□□□ -1.02
PTCH1-209ENST00000437951 C7orf33Q8WU49 177 aa8.68□□□□□ -1.02
PTCH1-209ENST00000437951 P0C879 139 aa8.68□□□□□ -1.02
PTCH1-209ENST00000437951 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
PTCH1-209ENST00000437951 RPS28P62857 69 aaKnown RBP8.68□□□□□ -1.02
PTCH1-209ENST00000437951 FRMD6-AS1P0C7T7 363 aa8.67□□□□□ -1.02
PTCH1-209ENST00000437951 DEFB136Q30KP8 78 aa8.67□□□□□ -1.02
PTCH1-209ENST00000437951 LRCOL1A6NCL2 159 aa8.67□□□□□ -1.02
PTCH1-209ENST00000437951 UBE2D1P51668 147 aa8.67□□□□□ -1.02
PTCH1-209ENST00000437951 RITA1Q96K30 269 aa8.67□□□□□ -1.02
PTCH1-209ENST00000437951 MYO9AB2RTY4 2548 aa8.66□□□□□ -1.02
PTCH1-209ENST00000437951 M0QY20 66 aa8.66□□□□□ -1.02
PTCH1-209ENST00000437951 ODF3L1Q8IXM7 274 aa8.66□□□□□ -1.02
PTCH1-209ENST00000437951 SMIM11BQ8TCY0 68 aa8.66□□□□□ -1.02
PTCH1-209ENST00000437951 hDV103S1A0JD37 113 aa8.66□□□□□ -1.02
PTCH1-209ENST00000437951 WFDC13Q8IUB5 93 aa8.65□□□□□ -1.02
PTCH1-209ENST00000437951 IGKV1D-37A0A075B6S9 117 aa8.65□□□□□ -1.02
PTCH1-209ENST00000437951 TRBV7-6A0A0J9YX20 115 aa8.65□□□□□ -1.02
PTCH1-209ENST00000437951 TRBV7-7A0A0K0K1E9 115 aa8.65□□□□□ -1.02
PTCH1-209ENST00000437951 CEMP1Q6PRD7 247 aaPredicted RBP8.65□□□□□ -1.02
PTCH1-209ENST00000437951 ESM1Q9NQ30 184 aa8.65□□□□□ -1.02
PTCH1-209ENST00000437951 IGHV4-30-2A0A087WSY4 118 aa8.65□□□□□ -1.02
PTCH1-209ENST00000437951 TRBV6-4A0A1B0GX49 114 aa8.65□□□□□ -1.02
PTCH1-209ENST00000437951 TRBV6-8A0A0A6YYG3 113 aa8.64□□□□□ -1.03
PTCH1-209ENST00000437951 C11orf45Q8TAV5 145 aa8.64□□□□□ -1.03
PTCH1-209ENST00000437951 MAP6D1Q9H9H5 199 aa8.64□□□□□ -1.03
PTCH1-209ENST00000437951 NTM-AS1Q6ZSK4 140 aa8.64□□□□□ -1.03
PTCH1-209ENST00000437951 TP53TG3Q9ULZ0 132 aa8.64□□□□□ -1.03
PTCH1-209ENST00000437951 A0A0J9YWU9 116 aa8.64□□□□□ -1.03
PTCH1-209ENST00000437951 CD164L2Q6UWJ8 174 aa8.64□□□□□ -1.03
PTCH1-209ENST00000437951 Q6ZQY7 126 aa8.64□□□□□ -1.03
PTCH1-209ENST00000437951 LINC00574Q9H8X3 128 aa8.64□□□□□ -1.03
PTCH1-209ENST00000437951 ZNF80P51504 273 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-209ENST00000437951 CELA1Q9UNI1 258 aa8.63□□□□□ -1.03
PTCH1-209ENST00000437951 HILS1P60008 231 aa8.63□□□□□ -1.03
PTCH1-209ENST00000437951 SOSTDC1Q6X4U4 206 aa8.63□□□□□ -1.03
PTCH1-209ENST00000437951 IGLV1-47P01700 117 aa8.63□□□□□ -1.03
PTCH1-209ENST00000437951 ZFHX2Q9C0A1 2572 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-209ENST00000437951 ADAMTS20P59510 1910 aa8.63□□□□□ -1.03
PTCH1-209ENST00000437951 BCE1O60756 84 aa8.63□□□□□ -1.03
PTCH1-209ENST00000437951 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-209ENST00000437951 ESRGQ1W209 222 aa8.62□□□□□ -1.03
PTCH1-209ENST00000437951 C10orf25Q5T742 122 aa8.62□□□□□ -1.03
PTCH1-209ENST00000437951 FAM215AQ9Y5M1 114 aa8.62□□□□□ -1.03
PTCH1-209ENST00000437951 TRBV10-3A0A0K0K1G6 114 aa8.62□□□□□ -1.03
PTCH1-209ENST00000437951 DEFB135Q30KP9 77 aa8.62□□□□□ -1.03
PTCH1-209ENST00000437951 A0A087WZ39 114 aa8.62□□□□□ -1.03
PTCH1-209ENST00000437951 A8MZ25 164 aa8.62□□□□□ -1.03
PTCH1-209ENST00000437951 ZNF73O43830 326 aaPredicted RBP8.62□□□□□ -1.03
PTCH1-209ENST00000437951 CPAMD8Q8IZJ3 1885 aa8.61□□□□□ -1.03
PTCH1-209ENST00000437951 Q6ZVQ6 151 aa8.61□□□□□ -1.03
PTCH1-209ENST00000437951 CRYGDP07320 174 aa8.61□□□□□ -1.03
PTCH1-209ENST00000437951 LINC00474Q9P2X8 69 aa8.61□□□□□ -1.03
PTCH1-209ENST00000437951 C22orf34Q6ZV56 151 aa8.61□□□□□ -1.03
PTCH1-209ENST00000437951 PSPHP1O15172 72 aa8.6□□□□□ -1.03
PTCH1-209ENST00000437951 PRR4Q16378 134 aa8.6□□□□□ -1.03
PTCH1-209ENST00000437951 Q8IZM0 81 aa8.6□□□□□ -1.03
PTCH1-209ENST00000437951 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
PTCH1-209ENST00000437951 Q8N814 137 aa8.6□□□□□ -1.03
PTCH1-209ENST00000437951 THSD7BQ9C0I4 1608 aa8.6□□□□□ -1.03
PTCH1-209ENST00000437951 MRGPRG-AS1Q2M3A8 158 aa8.6□□□□□ -1.03
PTCH1-209ENST00000437951 COL5A1P20908 1838 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-209ENST00000437951 LINC00208Q96KT6 92 aa8.59□□□□□ -1.03
PTCH1-209ENST00000437951 ACANP16112 2415 aa8.59□□□□□ -1.03
PTCH1-209ENST00000437951 IGLV4-69A0A075B6H9 119 aa8.59□□□□□ -1.03
PTCH1-209ENST00000437951 TSHBP01222 138 aa8.59□□□□□ -1.03
PTCH1-209ENST00000437951 CNFNQ9BYD5 112 aa8.59□□□□□ -1.03
PTCH1-209ENST00000437951 IGKV2-24A0A0C4DH68 120 aa8.58□□□□□ -1.04
PTCH1-209ENST00000437951 IGHV4-38-2P0DP08 117 aa8.58□□□□□ -1.04
PTCH1-209ENST00000437951 TMEM254Q8TBM7 123 aa8.57□□□□□ -1.04
PTCH1-209ENST00000437951 CRYGAP11844 174 aa8.57□□□□□ -1.04
PTCH1-209ENST00000437951 FSTL3O95633 263 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms