RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 USP17L23D6RBM5 183 aa13.75□□□□□ -0.21
GTF3A-203ENST00000435781 CLRN3Q8NCR9 226 aa13.75□□□□□ -0.21
GTF3A-203ENST00000435781 OR5A1Q8NGJ0 315 aa13.75□□□□□ -0.21
GTF3A-203ENST00000435781 TMEM101Q96IK0 257 aa13.75□□□□□ -0.21
GTF3A-203ENST00000435781 RHEBQ15382 184 aa13.74□□□□□ -0.21
GTF3A-203ENST00000435781 C14orf177Q52M58 125 aa13.74□□□□□ -0.21
GTF3A-203ENST00000435781 TCAPO15273 167 aa13.73□□□□□ -0.21
GTF3A-203ENST00000435781 S100PP25815 95 aa13.72□□□□□ -0.21
GTF3A-203ENST00000435781 RPS10P5Q9NQ39 176 aa13.72□□□□□ -0.21
GTF3A-203ENST00000435781 LAMTOR2Q9Y2Q5 125 aa13.72□□□□□ -0.21
GTF3A-203ENST00000435781 CDC42SE2Q9NRR3 84 aa13.71□□□□□ -0.21
GTF3A-203ENST00000435781 UBE2D4Q9Y2X8 147 aa13.71□□□□□ -0.21
GTF3A-203ENST00000435781 DNAH8Q96JB1 4490 aa13.7□□□□□ -0.22
GTF3A-203ENST00000435781 SMAGPQ0VAQ4 97 aa13.7□□□□□ -0.22
GTF3A-203ENST00000435781 GAGE12HA6NDE8 117 aa13.69□□□□□ -0.22
GTF3A-203ENST00000435781 PRSS47A8MTI9 375 aa13.69□□□□□ -0.22
GTF3A-203ENST00000435781 DGAT2L7PQ6IED9 249 aa13.69□□□□□ -0.22
GTF3A-203ENST00000435781 ZNF664Q8N3J9 261 aa13.69□□□□□ -0.22
GTF3A-203ENST00000435781 CHCHD10Q8WYQ3 142 aaPredicted RBP13.69□□□□□ -0.22
GTF3A-203ENST00000435781 TMEM18Q96B42 140 aa13.69□□□□□ -0.22
GTF3A-203ENST00000435781 CSDC2Q9Y534 153 aaKnown RBP13.69□□□□□ -0.22
GTF3A-203ENST00000435781 APOC3P02656 99 aa13.68□□□□□ -0.22
GTF3A-203ENST00000435781 PRSS1P07477 247 aa13.68□□□□□ -0.22
GTF3A-203ENST00000435781 TIMM21Q9BVV7 248 aa13.68□□□□□ -0.22
GTF3A-203ENST00000435781 MAP1LC3AQ9H492 121 aa13.68□□□□□ -0.22
GTF3A-203ENST00000435781 LOC389332A0A1B0GUA5 103 aa13.67□□□□□ -0.22
GTF3A-203ENST00000435781 LINC00959A0A1B0GUT2 108 aa13.67□□□□□ -0.22
GTF3A-203ENST00000435781 RPL39P62891 51 aaKnown RBP13.67□□□□□ -0.22
GTF3A-203ENST00000435781 NDUFA5Q16718 116 aa13.67□□□□□ -0.22
GTF3A-203ENST00000435781 RAB5AP20339 215 aa13.66□□□□□ -0.22
GTF3A-203ENST00000435781 LINC01620Q4KN68 170 aa13.66□□□□□ -0.22
GTF3A-203ENST00000435781 XGP55808 180 aa13.65□□□□□ -0.22
GTF3A-203ENST00000435781 KIAA1644Q3SXP7 199 aa13.65□□□□□ -0.22
GTF3A-203ENST00000435781 Q6ZUT4 128 aa13.65□□□□□ -0.22
GTF3A-203ENST00000435781 GNB1LQ9BYB4 327 aa13.65□□□□□ -0.22
GTF3A-203ENST00000435781 KRTAP17-1Q9BYP8 105 aa13.65□□□□□ -0.22
GTF3A-203ENST00000435781 RNASE13Q5GAN3 156 aaKnown RBP13.64□□□□□ -0.23
GTF3A-203ENST00000435781 SVBPQ8N300 66 aa13.64□□□□□ -0.23
GTF3A-203ENST00000435781 Q8N8P6 123 aa13.64□□□□□ -0.23
GTF3A-203ENST00000435781 CCL25O15444 150 aa13.63□□□□□ -0.23
GTF3A-203ENST00000435781 SNAPINO95295 136 aa13.63□□□□□ -0.23
GTF3A-203ENST00000435781 XCL1P47992 114 aa13.63□□□□□ -0.23
GTF3A-203ENST00000435781 FOXI1Q12951 378 aa13.63□□□□□ -0.23
GTF3A-203ENST00000435781 SS18Q15532 418 aa13.63□□□□□ -0.23
GTF3A-203ENST00000435781 SPANXA1Q9NS26 97 aa13.63□□□□□ -0.23
GTF3A-203ENST00000435781 FAM30AQ9NZY2 134 aa13.63□□□□□ -0.23
GTF3A-203ENST00000435781 COX19Q49B96 90 aa13.62□□□□□ -0.23
GTF3A-203ENST00000435781 C15orf56Q8N910 161 aa13.62□□□□□ -0.23
GTF3A-203ENST00000435781 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
GTF3A-203ENST00000435781 FAM104AQ969W3 186 aa13.61□□□□□ -0.23
GTF3A-203ENST00000435781 Q6ZSA8 131 aa13.6□□□□□ -0.23
GTF3A-203ENST00000435781 NXT2Q9NPJ8 142 aaKnown RBP13.6□□□□□ -0.23
GTF3A-203ENST00000435781 MT-ND6P03923 174 aa13.59□□□□□ -0.23
GTF3A-203ENST00000435781 HAMPP81172 84 aa13.59□□□□□ -0.23
GTF3A-203ENST00000435781 MRPS36P82909 103 aaKnown RBP13.59□□□□□ -0.23
GTF3A-203ENST00000435781 CFAP161Q6P656 301 aa13.59□□□□□ -0.23
GTF3A-203ENST00000435781 CD164L2Q6UWJ8 174 aa13.59□□□□□ -0.23
GTF3A-203ENST00000435781 OPRPNQ99935 248 aaPredicted RBP13.59□□□□□ -0.23
GTF3A-203ENST00000435781 TGIF2-C20orf24A0A0A6YYL0 155 aa13.58□□□□□ -0.24
GTF3A-203ENST00000435781 TRAV13-1A0A0B4J241 112 aa13.58□□□□□ -0.24
GTF3A-203ENST00000435781 C1orf196B1AJZ1 125 aa13.58□□□□□ -0.24
GTF3A-203ENST00000435781 IFI27P40305 119 aaPredicted RBP13.58□□□□□ -0.24
GTF3A-203ENST00000435781 Q8N1X5 172 aa13.58□□□□□ -0.24
GTF3A-203ENST00000435781 MRPL18Q9H0U6 180 aaKnown RBP13.58□□□□□ -0.24
GTF3A-203ENST00000435781 K7EMI3 77 aa13.57□□□□□ -0.24
GTF3A-203ENST00000435781 CNBPP62633 177 aaKnown RBP13.57□□□□□ -0.24
GTF3A-203ENST00000435781 ORMDL2Q53FV1 153 aa13.57□□□□□ -0.24
GTF3A-203ENST00000435781 ALKBH7Q9BT30 221 aaPredicted RBP13.57□□□□□ -0.24
GTF3A-203ENST00000435781 KRTAP4-5Q9BYR2 181 aa13.57□□□□□ -0.24
GTF3A-203ENST00000435781 AP5S1Q9NUS5 200 aa13.57□□□□□ -0.24
GTF3A-203ENST00000435781 HIGD2BQ4VC39 106 aa13.56□□□□□ -0.24
GTF3A-203ENST00000435781 C9orf163Q8N9P6 203 aa13.56□□□□□ -0.24
GTF3A-203ENST00000435781 PYGO1Q9Y3Y4 419 aa13.56□□□□□ -0.24
GTF3A-203ENST00000435781 SLPIP03973 132 aa13.55□□□□□ -0.24
GTF3A-203ENST00000435781 FABP9Q0Z7S8 132 aa13.55□□□□□ -0.24
GTF3A-203ENST00000435781 C2orf66Q6UXQ4 117 aa13.55□□□□□ -0.24
GTF3A-203ENST00000435781 CYSLTR1Q9Y271 337 aa13.55□□□□□ -0.24
GTF3A-203ENST00000435781 PCLOQ9Y6V0 5065 aa13.55□□□□□ -0.24
GTF3A-203ENST00000435781 FAT1Q14517 4588 aa13.55□□□□□ -0.24
GTF3A-203ENST00000435781 GVQW2A0A096LPI5 108 aaPredicted RBP13.54□□□□□ -0.24
GTF3A-203ENST00000435781 SLC7A5P1Q8MH63 180 aa13.54□□□□□ -0.24
GTF3A-203ENST00000435781 ABCA13Q86UQ4 5058 aa13.53□□□□□ -0.24
GTF3A-203ENST00000435781 IGLV4-3A0A075B6K6 122 aa13.53□□□□□ -0.24
GTF3A-203ENST00000435781 IGHV1-58A0A0C4DH39 117 aa13.53□□□□□ -0.24
GTF3A-203ENST00000435781 IFITM10A6NMD0 228 aa13.52□□□□□ -0.25
GTF3A-203ENST00000435781 PRSS3P2Q8NHM4 247 aa13.52□□□□□ -0.25
GTF3A-203ENST00000435781 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.51□□□□□ -0.25
GTF3A-203ENST00000435781 COX7A2LO14548 114 aa13.51□□□□□ -0.25
GTF3A-203ENST00000435781 TMEM141Q96I45 108 aa13.51□□□□□ -0.25
GTF3A-203ENST00000435781 TRAPPC1Q9Y5R8 145 aa13.51□□□□□ -0.25
GTF3A-203ENST00000435781 SMR3BP02814 79 aaPredicted RBP13.5□□□□□ -0.25
GTF3A-203ENST00000435781 YPEL4Q96NS1 127 aa13.5□□□□□ -0.25
GTF3A-203ENST00000435781 SDIM1Q6ZPB5 146 aa13.49□□□□□ -0.25
GTF3A-203ENST00000435781 SCXQ7RTU7 201 aa13.49□□□□□ -0.25
GTF3A-203ENST00000435781 CHAC1Q9BUX1 264 aa13.49□□□□□ -0.25
GTF3A-203ENST00000435781 VPS13BQ7Z7G8 4022 aa13.48□□□□□ -0.25
GTF3A-203ENST00000435781 LINC01546A6NGU7 62 aa13.48□□□□□ -0.25
GTF3A-203ENST00000435781 IGIPA6NJ69 53 aa13.48□□□□□ -0.25
GTF3A-203ENST00000435781 MALP21145 153 aa13.48□□□□□ -0.25
GTF3A-203ENST00000435781 G0S2P27469 103 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms