RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 SMAGPQ0VAQ4 97 aa11.33□□□□□ -0.6
NUP50-208ENST00000430547 FAM104BQ5XKR9 115 aa11.33□□□□□ -0.6
NUP50-208ENST00000430547 C15orf56Q8N910 161 aa11.32□□□□□ -0.6
NUP50-208ENST00000430547 LINC00862A6NCI5 91 aa11.31□□□□□ -0.6
NUP50-208ENST00000430547 F8W036 122 aa11.31□□□□□ -0.6
NUP50-208ENST00000430547 CKS2P33552 79 aa11.31□□□□□ -0.6
NUP50-208ENST00000430547 XCL1P47992 114 aa11.31□□□□□ -0.6
NUP50-208ENST00000430547 RAB14P61106 215 aa11.31□□□□□ -0.6
NUP50-208ENST00000430547 MRPL51Q4U2R6 128 aaKnown RBP11.31□□□□□ -0.6
NUP50-208ENST00000430547 MRPL54Q6P161 138 aaKnown RBP11.31□□□□□ -0.6
NUP50-208ENST00000430547 SDIM1Q6ZPB5 146 aa11.31□□□□□ -0.6
NUP50-208ENST00000430547 MRPL52Q86TS9 123 aaKnown RBP11.31□□□□□ -0.6
NUP50-208ENST00000430547 NRACQ8N912 160 aa11.31□□□□□ -0.6
NUP50-208ENST00000430547 CCL25O15444 150 aa11.3□□□□□ -0.6
NUP50-208ENST00000430547 HBBP68871 147 aa11.3□□□□□ -0.6
NUP50-208ENST00000430547 SS18Q15532 418 aa11.3□□□□□ -0.6
NUP50-208ENST00000430547 HIGD2BQ4VC39 106 aa11.3□□□□□ -0.6
NUP50-208ENST00000430547 DPH3Q96FX2 82 aa11.3□□□□□ -0.6
NUP50-208ENST00000430547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.3□□□□□ -0.6
NUP50-208ENST00000430547 LINC00959A0A1B0GUT2 108 aa11.29□□□□□ -0.6
NUP50-208ENST00000430547 ZNF664Q8N3J9 261 aa11.29□□□□□ -0.6
NUP50-208ENST00000430547 TMEM18Q96B42 140 aa11.29□□□□□ -0.6
NUP50-208ENST00000430547 CDC42SE2Q9NRR3 84 aa11.29□□□□□ -0.6
NUP50-208ENST00000430547 MYCBP2O75592 4640 aa11.29□□□□□ -0.6
NUP50-208ENST00000430547 FOXI1Q12951 378 aa11.28□□□□□ -0.6
NUP50-208ENST00000430547 C20orf78Q9BR46 151 aa11.28□□□□□ -0.6
NUP50-208ENST00000430547 GVQW2A0A096LPI5 108 aaPredicted RBP11.27□□□□□ -0.61
NUP50-208ENST00000430547 J3QL48 77 aa11.27□□□□□ -0.61
NUP50-208ENST00000430547 TCAPO15273 167 aa11.27□□□□□ -0.61
NUP50-208ENST00000430547 SLPIP03973 132 aa11.27□□□□□ -0.61
NUP50-208ENST00000430547 RPL37AP61513 92 aaKnown RBP11.27□□□□□ -0.61
NUP50-208ENST00000430547 D6R8Y8 96 aa11.26□□□□□ -0.61
NUP50-208ENST00000430547 PANO1I0J062 215 aa11.26□□□□□ -0.61
NUP50-208ENST00000430547 TRBV24-1A0A075B6N3 115 aa11.25□□□□□ -0.61
NUP50-208ENST00000430547 IGHV1-58A0A0C4DH39 117 aa11.25□□□□□ -0.61
NUP50-208ENST00000430547 A0A1B0GXF2 115 aa11.25□□□□□ -0.61
NUP50-208ENST00000430547 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
NUP50-208ENST00000430547 PNRC1Q12796 327 aaPredicted RBP11.25□□□□□ -0.61
NUP50-208ENST00000430547 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
NUP50-208ENST00000430547 CSDC2Q9Y534 153 aaKnown RBP11.25□□□□□ -0.61
NUP50-208ENST00000430547 PPBPP02775 128 aa11.24□□□□□ -0.61
NUP50-208ENST00000430547 RPL32P62910 135 aaKnown RBP11.24□□□□□ -0.61
NUP50-208ENST00000430547 CIRBPQ14011 172 aaKnown RBP11.24□□□□□ -0.61
NUP50-208ENST00000430547 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
NUP50-208ENST00000430547 ATP5L2Q7Z4Y8 100 aa11.24□□□□□ -0.61
NUP50-208ENST00000430547 SMIM2Q9BVW6 85 aa11.24□□□□□ -0.61
NUP50-208ENST00000430547 C1orf196B1AJZ1 125 aa11.23□□□□□ -0.61
NUP50-208ENST00000430547 CHTF8P0CG12 524 aa11.23□□□□□ -0.61
NUP50-208ENST00000430547 COX6A2Q02221 97 aa11.23□□□□□ -0.61
NUP50-208ENST00000430547 ZNF561-AS1K7EIQ3 104 aa11.22□□□□□ -0.61
NUP50-208ENST00000430547 MT-ND4LP03901 98 aa11.22□□□□□ -0.61
NUP50-208ENST00000430547 MALP21145 153 aa11.22□□□□□ -0.61
NUP50-208ENST00000430547 KRTAP10-4P60372 401 aaPredicted RBP11.22□□□□□ -0.61
NUP50-208ENST00000430547 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
NUP50-208ENST00000430547 SPACA4Q8TDM5 124 aa11.22□□□□□ -0.61
NUP50-208ENST00000430547 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
NUP50-208ENST00000430547 A0A087WYN8 130 aa11.21□□□□□ -0.61
NUP50-208ENST00000430547 PHOX2AO14813 284 aa11.21□□□□□ -0.61
NUP50-208ENST00000430547 NPYP01303 97 aa11.21□□□□□ -0.61
NUP50-208ENST00000430547 ORMDL3Q8N138 153 aa11.21□□□□□ -0.61
NUP50-208ENST00000430547 ANAPC16Q96DE5 110 aa11.21□□□□□ -0.61
NUP50-208ENST00000430547 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.61
NUP50-208ENST00000430547 TRAV13-1A0A0B4J241 112 aa11.2□□□□□ -0.62
NUP50-208ENST00000430547 IGKV2-24A0A0C4DH68 120 aa11.2□□□□□ -0.62
NUP50-208ENST00000430547 Q6ZUT4 128 aa11.2□□□□□ -0.62
NUP50-208ENST00000430547 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
NUP50-208ENST00000430547 HERC1Q15751 4861 aa11.2□□□□□ -0.62
NUP50-208ENST00000430547 KRTAP29-1A8MX34 341 aaPredicted RBP11.19□□□□□ -0.62
NUP50-208ENST00000430547 COX7A2LO14548 114 aa11.19□□□□□ -0.62
NUP50-208ENST00000430547 RAB5AP20339 215 aa11.19□□□□□ -0.62
NUP50-208ENST00000430547 MAJINQ3KP22 176 aa11.19□□□□□ -0.62
NUP50-208ENST00000430547 TMEM136Q6ZRR5 245 aa11.19□□□□□ -0.62
NUP50-208ENST00000430547 PRSS3P2Q8NHM4 247 aa11.19□□□□□ -0.62
NUP50-208ENST00000430547 PRELID3AQ96N28 172 aa11.19□□□□□ -0.62
NUP50-208ENST00000430547 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
NUP50-208ENST00000430547 LINC00526Q96FQ7 95 aa11.18□□□□□ -0.62
NUP50-208ENST00000430547 SPANXA1Q9NS26 97 aa11.18□□□□□ -0.62
NUP50-208ENST00000430547 CLLU1Q5K131 121 aa11.17□□□□□ -0.62
NUP50-208ENST00000430547 SYCNQ0VAF6 134 aa11.16□□□□□ -0.62
NUP50-208ENST00000430547 C7orf33Q8WU49 177 aa11.16□□□□□ -0.62
NUP50-208ENST00000430547 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
NUP50-208ENST00000430547 LINC00474Q9P2X8 69 aa11.16□□□□□ -0.62
NUP50-208ENST00000430547 APOMO95445 188 aa11.15□□□□□ -0.62
NUP50-208ENST00000430547 LAMTOR2Q9Y2Q5 125 aa11.15□□□□□ -0.62
NUP50-208ENST00000430547 A0A096LNI7 61 aa11.14□□□□□ -0.63
NUP50-208ENST00000430547 IFI27P40305 119 aaPredicted RBP11.14□□□□□ -0.63
NUP50-208ENST00000430547 C5orf38Q86SI9 138 aa11.14□□□□□ -0.63
NUP50-208ENST00000430547 STPG4Q8N801 248 aa11.14□□□□□ -0.63
NUP50-208ENST00000430547 MAP1LC3AQ9H492 121 aa11.14□□□□□ -0.63
NUP50-208ENST00000430547 IGLV4-69A0A075B6H9 119 aa11.13□□□□□ -0.63
NUP50-208ENST00000430547 IFITM10A6NMD0 228 aa11.13□□□□□ -0.63
NUP50-208ENST00000430547 OXTP01178 125 aa11.13□□□□□ -0.63
NUP50-208ENST00000430547 MRPS36P82909 103 aaKnown RBP11.13□□□□□ -0.63
NUP50-208ENST00000430547 CAMK2N2Q96S95 79 aa11.13□□□□□ -0.63
NUP50-208ENST00000430547 LOC389332A0A1B0GUA5 103 aa11.12□□□□□ -0.63
NUP50-208ENST00000430547 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
NUP50-208ENST00000430547 OPRPNQ99935 248 aaPredicted RBP11.11□□□□□ -0.63
NUP50-208ENST00000430547 HNRNPA3P51991 378 aaKnown RBP11.1□□□□□ -0.63
NUP50-208ENST00000430547 SPAG11BQ08648 103 aa11.1□□□□□ -0.63
NUP50-208ENST00000430547 Q6ZRU5 148 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms