RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ZNF702PQ9H963 129 aa11.89□□□□□ -0.51
PKP4-205ENST00000426248 TMEM190Q8WZ59 177 aa11.89□□□□□ -0.51
PKP4-205ENST00000426248 KLK9Q9UKQ9 250 aa11.89□□□□□ -0.51
PKP4-205ENST00000426248 A0A0B4J2C4 111 aa11.89□□□□□ -0.51
PKP4-205ENST00000426248 GNRH2O43555 120 aa11.88□□□□□ -0.51
PKP4-205ENST00000426248 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
PKP4-205ENST00000426248 C9orf139Q6ZV77 190 aa11.88□□□□□ -0.51
PKP4-205ENST00000426248 F8W735 103 aaPredicted RBP11.88□□□□□ -0.51
PKP4-205ENST00000426248 VCYO14598 125 aa11.88□□□□□ -0.51
PKP4-205ENST00000426248 DNAL4O96015 105 aa11.88□□□□□ -0.51
PKP4-205ENST00000426248 CFHR3Q02985 330 aa11.88□□□□□ -0.51
PKP4-205ENST00000426248 C18orf65Q6ZTR6 163 aa11.87□□□□□ -0.51
PKP4-205ENST00000426248 ZNRF2Q8NHG8 242 aa11.87□□□□□ -0.51
PKP4-205ENST00000426248 CITED2Q99967 270 aaPredicted RBP11.87□□□□□ -0.51
PKP4-205ENST00000426248 TRAV21A0A0B4J279 112 aa11.87□□□□□ -0.51
PKP4-205ENST00000426248 SPINK13Q1W4C9 94 aa11.87□□□□□ -0.51
PKP4-205ENST00000426248 KIR2DL5BQ8NHK3 375 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 JPT2Q9H910 190 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 ZNF580Q9UK33 172 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 SDIM1Q6ZPB5 146 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 NDUFA12Q9UI09 145 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 SMAD5-AS1Q9Y6J3 95 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 CD28P10747 220 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 C4orf26Q17RF5 130 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 LINC00643Q86TS7 51 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 LINC00526Q96FQ7 95 aa11.86□□□□□ -0.51
PKP4-205ENST00000426248 IGLV4-69A0A075B6H9 119 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 LEPROTO15243 131 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 COX7CP15954 63 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 PSMB8P28062 276 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 ZFAND3Q9H8U3 227 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 PKIGQ9Y2B9 76 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 LINC01546A6NGU7 62 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 IGHV3-38A0A0C4DH36 116 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 DEFB131AP59861 70 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 TMEM141Q96I45 108 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 MUC4Q99102 2169 aa11.85□□□□□ -0.51
PKP4-205ENST00000426248 CCL24O00175 119 aa11.84□□□□□ -0.51
PKP4-205ENST00000426248 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
PKP4-205ENST00000426248 I3L3M4 83 aa11.84□□□□□ -0.51
PKP4-205ENST00000426248 CRYGDP07320 174 aa11.84□□□□□ -0.51
PKP4-205ENST00000426248 ZNF876PQ49A33 203 aa11.84□□□□□ -0.51
PKP4-205ENST00000426248 TRGV2A0A075B6R0 118 aa11.84□□□□□ -0.51
PKP4-205ENST00000426248 TMEM86BQ8N661 226 aa11.84□□□□□ -0.51
PKP4-205ENST00000426248 BAHCC1Q9P281 2608 aa11.83□□□□□ -0.52
PKP4-205ENST00000426248 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
PKP4-205ENST00000426248 KRTAP1-3Q8IUG1 177 aa11.83□□□□□ -0.52
PKP4-205ENST00000426248 IGLV1-40P01703 118 aa11.83□□□□□ -0.52
PKP4-205ENST00000426248 TENM4Q6N022 2769 aa11.83□□□□□ -0.52
PKP4-205ENST00000426248 ATOX1O00244 68 aa11.83□□□□□ -0.52
PKP4-205ENST00000426248 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.52
PKP4-205ENST00000426248 OVOL1O14753 267 aa11.82□□□□□ -0.52
PKP4-205ENST00000426248 ACYP1P07311 99 aa11.82□□□□□ -0.52
PKP4-205ENST00000426248 ESM1Q9NQ30 184 aa11.82□□□□□ -0.52
PKP4-205ENST00000426248 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
PKP4-205ENST00000426248 EDN2P20800 178 aa11.82□□□□□ -0.52
PKP4-205ENST00000426248 TRBV7-7A0A0K0K1E9 115 aa11.81□□□□□ -0.52
PKP4-205ENST00000426248 CIRBPQ14011 172 aaKnown RBP11.81□□□□□ -0.52
PKP4-205ENST00000426248 C19orf54Q5BKX5 351 aa11.81□□□□□ -0.52
PKP4-205ENST00000426248 LINC01006Q8NI28 216 aa11.81□□□□□ -0.52
PKP4-205ENST00000426248 FBN2P35556 2912 aa11.81□□□□□ -0.52
PKP4-205ENST00000426248 A8MZ25 164 aa11.81□□□□□ -0.52
PKP4-205ENST00000426248 GPHB5Q86YW7 130 aa11.81□□□□□ -0.52
PKP4-205ENST00000426248 XCL2Q9UBD3 114 aa11.81□□□□□ -0.52
PKP4-205ENST00000426248 NBEAL1Q6ZS30 2694 aa11.81□□□□□ -0.52
PKP4-205ENST00000426248 DAZ2Q13117 558 aaKnown RBP11.8□□□□□ -0.52
PKP4-205ENST00000426248 DAZ4Q86SG3 579 aaKnown RBP11.8□□□□□ -0.52
PKP4-205ENST00000426248 DAZ3Q9NR90 486 aaKnown RBP11.8□□□□□ -0.52
PKP4-205ENST00000426248 IGHV3-30-3P0DP02 117 aa11.79□□□□□ -0.52
PKP4-205ENST00000426248 UBE2L6O14933 153 aa11.79□□□□□ -0.52
PKP4-205ENST00000426248 TSHBP01222 138 aa11.79□□□□□ -0.52
PKP4-205ENST00000426248 SUMO4Q6EEV6 95 aa11.79□□□□□ -0.52
PKP4-205ENST00000426248 FAM240AA0A1B0GVK7 77 aa11.78□□□□□ -0.52
PKP4-205ENST00000426248 TMEM223A0PJW6 202 aa11.78□□□□□ -0.52
PKP4-205ENST00000426248 IMUPQ9GZP8 106 aa11.78□□□□□ -0.52
PKP4-205ENST00000426248 CLPSL1A2RUU4 121 aa11.78□□□□□ -0.52
PKP4-205ENST00000426248 LST1O00453 97 aa11.78□□□□□ -0.52
PKP4-205ENST00000426248 NXPH4O95158 308 aa11.78□□□□□ -0.52
PKP4-205ENST00000426248 PRR9Q5T870 116 aa11.78□□□□□ -0.52
PKP4-205ENST00000426248 TMEM89A2RUT3 159 aa11.78□□□□□ -0.52
PKP4-205ENST00000426248 HILS1P60008 231 aa11.78□□□□□ -0.52
PKP4-205ENST00000426248 STHQ8IWL8 128 aa11.77□□□□□ -0.52
PKP4-205ENST00000426248 Q9HAA7 133 aa11.77□□□□□ -0.53
PKP4-205ENST00000426248 CELSR1Q9NYQ6 3014 aa11.77□□□□□ -0.53
PKP4-205ENST00000426248 A0A096LPF7 62 aa11.76□□□□□ -0.53
PKP4-205ENST00000426248 KMT2BQ9UMN6 2715 aaPredicted RBP11.76□□□□□ -0.53
PKP4-205ENST00000426248 A0A087WVE0 104 aa11.76□□□□□ -0.53
PKP4-205ENST00000426248 EIF4EBP3O60516 100 aaPredicted RBP11.76□□□□□ -0.53
PKP4-205ENST00000426248 TMEM61Q8N0U2 210 aa11.76□□□□□ -0.53
PKP4-205ENST00000426248 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
PKP4-205ENST00000426248 SVEP1Q4LDE5 3571 aa11.75□□□□□ -0.53
PKP4-205ENST00000426248 IGIPA6NJ69 53 aa11.75□□□□□ -0.53
PKP4-205ENST00000426248 FSHBP01225 129 aa11.75□□□□□ -0.53
PKP4-205ENST00000426248 DEFB130BP0DP73 79 aa11.75□□□□□ -0.53
PKP4-205ENST00000426248 DEFB130AP0DP74 79 aa11.75□□□□□ -0.53
PKP4-205ENST00000426248 APRG1Q8IVJ8 170 aa11.75□□□□□ -0.53
PKP4-205ENST00000426248 SETXQ7Z333 2677 aaKnown RBP11.75□□□□□ -0.53
PKP4-205ENST00000426248 TRGV1A0A0A0MS02 117 aa11.75□□□□□ -0.53
PKP4-205ENST00000426248 K7EMT4 169 aa11.75□□□□□ -0.53
PKP4-205ENST00000426248 C4orf3Q8WVX3 66 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms