RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 COX7A2LO14548 114 aa12.52□□□□□ -0.41
RARA-206ENST00000425707 SS18L2Q9UHA2 77 aa12.52□□□□□ -0.41
RARA-206ENST00000425707 SHISA2Q6UWI4 295 aa12.51□□□□□ -0.41
RARA-206ENST00000425707 Q6ZSV7 163 aa12.51□□□□□ -0.41
RARA-206ENST00000425707 VPREB3Q9UKI3 123 aa12.51□□□□□ -0.41
RARA-206ENST00000425707 CENPEQ02224 2701 aa12.5□□□□□ -0.41
RARA-206ENST00000425707 LINC01356Q8N9X3 169 aa12.5□□□□□ -0.41
RARA-206ENST00000425707 Q9UF83 564 aa12.5□□□□□ -0.41
RARA-206ENST00000425707 HTN1P15515 57 aa12.49□□□□□ -0.41
RARA-206ENST00000425707 ZNF702PQ9H963 129 aa12.49□□□□□ -0.41
RARA-206ENST00000425707 CCDC179H3BU77 68 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 TRACP01848 142 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 NPC2P61916 151 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 ZFHX3Q15911 3703 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 IGHV3OR16-12A0A075B7B8 117 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 DGAT2L7PQ6IED9 249 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 LINC00242Q5T6M2 205 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.48□□□□□ -0.41
RARA-206ENST00000425707 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
RARA-206ENST00000425707 INSP01308 110 aa12.47□□□□□ -0.41
RARA-206ENST00000425707 HERV-K104P63124 156 aa12.47□□□□□ -0.41
RARA-206ENST00000425707 Q9H8V8 135 aa12.47□□□□□ -0.41
RARA-206ENST00000425707 SPG11Q96JI7 2443 aa12.46□□□□□ -0.41
RARA-206ENST00000425707 LINC01587Q99440 93 aa12.46□□□□□ -0.41
RARA-206ENST00000425707 COX6A2Q02221 97 aa12.46□□□□□ -0.42
RARA-206ENST00000425707 SDIM1Q6ZPB5 146 aa12.46□□□□□ -0.42
RARA-206ENST00000425707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.45□□□□□ -0.427e-7■■■■□ 25.6
RARA-206ENST00000425707 TRBV10-1A0A0K0K1A3 114 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 SMIM1B2RUZ4 78 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 FAM222AQ5U5X8 452 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 Q6YL49 198 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 ZNF625Q96I27 306 aaPredicted RBP12.45□□□□□ -0.42
RARA-206ENST00000425707 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
RARA-206ENST00000425707 CRYBG3Q68DQ2 2970 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 FSHBP01225 129 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 DAND5Q8N907 189 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 IL17DQ8TAD2 202 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 IGHV3-38A0A0C4DH36 116 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 PF4P02776 101 aa12.44□□□□□ -0.42
RARA-206ENST00000425707 MAP1AP78559 2803 aaPredicted RBP12.43□□□□□ -0.42
RARA-206ENST00000425707 Q8N2B8 174 aa12.43□□□□□ -0.42
RARA-206ENST00000425707 ZNF843Q8N446 348 aa12.43□□□□□ -0.42
RARA-206ENST00000425707 SLURP1P55000 103 aa12.43□□□□□ -0.42
RARA-206ENST00000425707 DAZ2Q13117 558 aaKnown RBP12.43□□□□□ -0.42
RARA-206ENST00000425707 DAZ4Q86SG3 579 aaKnown RBP12.43□□□□□ -0.42
RARA-206ENST00000425707 LINC00643Q86TS7 51 aa12.43□□□□□ -0.42
RARA-206ENST00000425707 DAZ3Q9NR90 486 aaKnown RBP12.43□□□□□ -0.42
RARA-206ENST00000425707 A0A096LNT2 108 aa12.42□□□□□ -0.42
RARA-206ENST00000425707 SOSTDC1Q6X4U4 206 aa12.41□□□□□ -0.42
RARA-206ENST00000425707 PRM2P04554 102 aa12.41□□□□□ -0.42
RARA-206ENST00000425707 F5H768 121 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 C4orf3Q8WVX3 66 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 DOPEY1Q5JWR5 2465 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 ATP5G1P05496 136 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 CELSR1Q9NYQ6 3014 aa12.4□□□□□ -0.42
RARA-206ENST00000425707 RPL36AP83881 106 aaKnown RBP12.4□□□□□ -0.43
RARA-206ENST00000425707 RPL36ALQ969Q0 106 aaKnown RBP12.4□□□□□ -0.43
RARA-206ENST00000425707 PRIMA1Q86XR5 153 aa12.39□□□□□ -0.43
RARA-206ENST00000425707 TMEM126AQ9H061 195 aa12.39□□□□□ -0.43
RARA-206ENST00000425707 FAM110AQ9BQ89 295 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 CDC42SE2Q9NRR3 84 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 INAFM2P0DMQ5 153 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 CXCL5P42830 114 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 DEFB114Q30KQ6 69 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 MEIG1Q5JSS6 88 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 OVOL2Q9BRP0 275 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
RARA-206ENST00000425707 FASNP49327 2511 aaKnown RBP12.38□□□□□ -0.43
RARA-206ENST00000425707 SORL1Q92673 2214 aa12.38□□□□□ -0.43
RARA-206ENST00000425707 TRAV13-2A0A0B4J235 113 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 K7EQD1 137 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 KMT2BQ9UMN6 2715 aaPredicted RBP12.37□□□□□ -0.43
RARA-206ENST00000425707 RPL28P46779 137 aaKnown RBP12.37□□□□□ -0.43
RARA-206ENST00000425707 HIST2H2BCQ6DN03 193 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 HIST2H2BDQ6DRA6 164 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 DYNLRB2Q8TF09 96 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 LINC00694P0DN24 101 aa12.37□□□□□ -0.43
RARA-206ENST00000425707 BAALC-AS2P0C853 105 aa12.36□□□□□ -0.43
RARA-206ENST00000425707 NTM-AS1Q6ZSK4 140 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 POLQO75417 2590 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 DEFB136Q30KP8 78 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 CHCHD5Q9BSY4 110 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 C22orf24Q9Y442 160 aa12.35□□□□□ -0.43
RARA-206ENST00000425707 C18orf65Q6ZTR6 163 aa12.34□□□□□ -0.43
RARA-206ENST00000425707 USP9YO00507 2555 aaPredicted RBP12.34□□□□□ -0.43
RARA-206ENST00000425707 C1orf158Q8N1D5 194 aa12.33□□□□□ -0.44
RARA-206ENST00000425707 SMCR5Q8TEV8 140 aa12.33□□□□□ -0.44
RARA-206ENST00000425707 TRAV13-1A0A0B4J241 112 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 FAM236AA0A1B0GUQ0 79 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 FAM236BA0A1B0GV22 79 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
RARA-206ENST00000425707 ABCA12Q86UK0 2595 aa12.31□□□□□ -0.44
RARA-206ENST00000425707 CSPG4Q6UVK1 2322 aa12.31□□□□□ -0.44
RARA-206ENST00000425707 TENM4Q6N022 2769 aa12.3□□□□□ -0.44
RARA-206ENST00000425707 CELSR2Q9HCU4 2923 aa12.3□□□□□ -0.44
RARA-206ENST00000425707 ODF3L2Q3SX64 289 aa12.3□□□□□ -0.44
RARA-206ENST00000425707 FAM218AQ96MZ4 157 aa12.3□□□□□ -0.44
RARA-206ENST00000425707 TMEM243Q9BU79 118 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms