RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.1
SGCE-203ENST00000425444 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
SGCE-203ENST00000425444 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.1
SGCE-203ENST00000425444 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.1
SGCE-203ENST00000425444 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.2□□□□□ -1.1
SGCE-203ENST00000425444 A0A1B0GW15 77 aa8.2□□□□□ -1.1
SGCE-203ENST00000425444 C7orf77A4D0Y5 90 aa8.2□□□□□ -1.1
SGCE-203ENST00000425444 ESDP10768 282 aa8.2□□□□□ -1.1
SGCE-203ENST00000425444 POLR2KP53803 58 aaKnown RBP8.2□□□□□ -1.1
SGCE-203ENST00000425444 RAB14P61106 215 aa8.2□□□□□ -1.1
SGCE-203ENST00000425444 MRPL54Q6P161 138 aaKnown RBP8.2□□□□□ -1.1
SGCE-203ENST00000425444 CFAP161Q6P656 301 aa8.2□□□□□ -1.1
SGCE-203ENST00000425444 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
SGCE-203ENST00000425444 TRBV27A0A0K0K1C4 114 aa8.19□□□□□ -1.1
SGCE-203ENST00000425444 VCYO14598 125 aa8.19□□□□□ -1.1
SGCE-203ENST00000425444 PPP1R2P9O14990 202 aa8.19□□□□□ -1.1
SGCE-203ENST00000425444 S100A8P05109 93 aa8.19□□□□□ -1.1
SGCE-203ENST00000425444 SUMO2P61956 95 aaKnown RBP8.19□□□□□ -1.1
SGCE-203ENST00000425444 CNBPP62633 177 aaKnown RBP8.19□□□□□ -1.1
SGCE-203ENST00000425444 MRPL51Q4U2R6 128 aaKnown RBP8.19□□□□□ -1.1
SGCE-203ENST00000425444 FAM104BQ5XKR9 115 aa8.19□□□□□ -1.1
SGCE-203ENST00000425444 KIR2DL4Q99706 377 aa8.19□□□□□ -1.1
SGCE-203ENST00000425444 CKS2P33552 79 aa8.18□□□□□ -1.1
SGCE-203ENST00000425444 XCL1P47992 114 aa8.18□□□□□ -1.1
SGCE-203ENST00000425444 HBBP68871 147 aa8.18□□□□□ -1.1
SGCE-203ENST00000425444 HIGD2BQ4VC39 106 aa8.18□□□□□ -1.1
SGCE-203ENST00000425444 C15orf56Q8N910 161 aa8.18□□□□□ -1.1
SGCE-203ENST00000425444 NRACQ8N912 160 aa8.18□□□□□ -1.1
SGCE-203ENST00000425444 IGHV3-64A0A075B6Q5 118 aa8.17□□□□□ -1.1
SGCE-203ENST00000425444 F8W036 122 aa8.17□□□□□ -1.1
SGCE-203ENST00000425444 SMAGPQ0VAQ4 97 aa8.17□□□□□ -1.1
SGCE-203ENST00000425444 LINC00959A0A1B0GUT2 108 aa8.16□□□□□ -1.1
SGCE-203ENST00000425444 LINC00862A6NCI5 91 aa8.16□□□□□ -1.1
SGCE-203ENST00000425444 CCL25O15444 150 aa8.16□□□□□ -1.1
SGCE-203ENST00000425444 SS18Q15532 418 aa8.16□□□□□ -1.1
SGCE-203ENST00000425444 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
SGCE-203ENST00000425444 KRTAP9-2Q9BYQ4 174 aa8.16□□□□□ -1.1
SGCE-203ENST00000425444 CDC42SE2Q9NRR3 84 aa8.16□□□□□ -1.1
SGCE-203ENST00000425444 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.16□□□□□ -1.1
SGCE-203ENST00000425444 FOXI1Q12951 378 aa8.15□□□□□ -1.1
SGCE-203ENST00000425444 SDIM1Q6ZPB5 146 aa8.15□□□□□ -1.1
SGCE-203ENST00000425444 ZNF664Q8N3J9 261 aa8.15□□□□□ -1.1
SGCE-203ENST00000425444 TMEM18Q96B42 140 aa8.15□□□□□ -1.1
SGCE-203ENST00000425444 C20orf78Q9BR46 151 aa8.15□□□□□ -1.1
SGCE-203ENST00000425444 A0A1B0GXF2 115 aa8.14□□□□□ -1.11
SGCE-203ENST00000425444 D6R8Y8 96 aa8.14□□□□□ -1.11
SGCE-203ENST00000425444 PANO1I0J062 215 aa8.14□□□□□ -1.11
SGCE-203ENST00000425444 TNFRSF6BO95407 300 aa8.14□□□□□ -1.11
SGCE-203ENST00000425444 SLPIP03973 132 aa8.14□□□□□ -1.11
SGCE-203ENST00000425444 PNRC1Q12796 327 aaPredicted RBP8.14□□□□□ -1.11
SGCE-203ENST00000425444 ATP5L2Q7Z4Y8 100 aa8.14□□□□□ -1.11
SGCE-203ENST00000425444 DPH3Q96FX2 82 aa8.14□□□□□ -1.11
SGCE-203ENST00000425444 TRBV24-1A0A075B6N3 115 aa8.13□□□□□ -1.11
SGCE-203ENST00000425444 GVQW2A0A096LPI5 108 aaPredicted RBP8.13□□□□□ -1.11
SGCE-203ENST00000425444 TCAPO15273 167 aa8.13□□□□□ -1.11
SGCE-203ENST00000425444 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
SGCE-203ENST00000425444 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
SGCE-203ENST00000425444 RNASE13Q5GAN3 156 aaKnown RBP8.13□□□□□ -1.11
SGCE-203ENST00000425444 SMIM2Q9BVW6 85 aa8.13□□□□□ -1.11
SGCE-203ENST00000425444 UBE2D4Q9Y2X8 147 aa8.13□□□□□ -1.11
SGCE-203ENST00000425444 IGHV1-58A0A0C4DH39 117 aa8.12□□□□□ -1.11
SGCE-203ENST00000425444 PPBPP02775 128 aa8.12□□□□□ -1.11
SGCE-203ENST00000425444 MT-ND4LP03901 98 aa8.12□□□□□ -1.11
SGCE-203ENST00000425444 NPYP01303 97 aa8.11□□□□□ -1.11
SGCE-203ENST00000425444 CHTF8P0CG12 524 aa8.11□□□□□ -1.11
SGCE-203ENST00000425444 RPL32P62910 135 aaKnown RBP8.11□□□□□ -1.11
SGCE-203ENST00000425444 CLLU1Q5K131 121 aa8.11□□□□□ -1.11
SGCE-203ENST00000425444 CD164L2Q6UWJ8 174 aa8.11□□□□□ -1.11
SGCE-203ENST00000425444 Q6ZUT4 128 aa8.11□□□□□ -1.11
SGCE-203ENST00000425444 ORMDL3Q8N138 153 aa8.11□□□□□ -1.11
SGCE-203ENST00000425444 CSDC2Q9Y534 153 aaKnown RBP8.11□□□□□ -1.11
SGCE-203ENST00000425444 TRAV13-1A0A0B4J241 112 aa8.1□□□□□ -1.11
SGCE-203ENST00000425444 C1orf196B1AJZ1 125 aa8.1□□□□□ -1.11
SGCE-203ENST00000425444 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
SGCE-203ENST00000425444 PHOX2AO14813 284 aa8.1□□□□□ -1.11
SGCE-203ENST00000425444 MALP21145 153 aa8.1□□□□□ -1.11
SGCE-203ENST00000425444 COX6A2Q02221 97 aa8.1□□□□□ -1.11
SGCE-203ENST00000425444 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
SGCE-203ENST00000425444 TMEM136Q6ZRR5 245 aa8.1□□□□□ -1.11
SGCE-203ENST00000425444 SPACA4Q8TDM5 124 aa8.1□□□□□ -1.11
SGCE-203ENST00000425444 ANAPC16Q96DE5 110 aa8.1□□□□□ -1.11
SGCE-203ENST00000425444 IGKV2-24A0A0C4DH68 120 aa8.09□□□□□ -1.11
SGCE-203ENST00000425444 KRTAP9-6A0A140TA67 174 aa8.09□□□□□ -1.11
SGCE-203ENST00000425444 COX7A2LO14548 114 aa8.09□□□□□ -1.11
SGCE-203ENST00000425444 HNRNPA3P51991 378 aaKnown RBP8.09□□□□□ -1.11
SGCE-203ENST00000425444 RPL39P62891 51 aaKnown RBP8.09□□□□□ -1.11
SGCE-203ENST00000425444 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
SGCE-203ENST00000425444 PRELID3AQ96N28 172 aa8.09□□□□□ -1.11
SGCE-203ENST00000425444 TIMM21Q9BVV7 248 aa8.09□□□□□ -1.11
SGCE-203ENST00000425444 A0A087WYN8 130 aa8.08□□□□□ -1.12
SGCE-203ENST00000425444 RAB5AP20339 215 aa8.08□□□□□ -1.12
SGCE-203ENST00000425444 MAJINQ3KP22 176 aa8.08□□□□□ -1.12
SGCE-203ENST00000425444 PRSS3P2Q8NHM4 247 aa8.08□□□□□ -1.12
SGCE-203ENST00000425444 CARD19Q96LW7 228 aa8.08□□□□□ -1.12
SGCE-203ENST00000425444 SPANXA1Q9NS26 97 aa8.08□□□□□ -1.12
SGCE-203ENST00000425444 PKIGQ9Y2B9 76 aa8.08□□□□□ -1.12
SGCE-203ENST00000425444 MUC2Q02817 5179 aa8.07□□□□□ -1.12
SGCE-203ENST00000425444 LOC389332A0A1B0GUA5 103 aa8.06□□□□□ -1.12
SGCE-203ENST00000425444 SYCNQ0VAF6 134 aa8.06□□□□□ -1.12
SGCE-203ENST00000425444 MAP1LC3AQ9H492 121 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms