RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 C10orf126Q8N4M7 172 aa10.6□□□□□ -0.71
DDX55-203ENST00000421670 TOMM6Q96B49 74 aa10.6□□□□□ -0.71
DDX55-203ENST00000421670 TMEM101Q96IK0 257 aa10.6□□□□□ -0.71
DDX55-203ENST00000421670 HSBP1O75506 76 aa10.59□□□□□ -0.71
DDX55-203ENST00000421670 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
DDX55-203ENST00000421670 Q6ZR54 194 aa10.59□□□□□ -0.71
DDX55-203ENST00000421670 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
DDX55-203ENST00000421670 OPRPNQ99935 248 aaPredicted RBP10.59□□□□□ -0.71
DDX55-203ENST00000421670 RYR3Q15413 4870 aa10.59□□□□□ -0.71
DDX55-203ENST00000421670 HBDP02042 147 aa10.58□□□□□ -0.72
DDX55-203ENST00000421670 FAM19A2Q8N3H0 131 aa10.58□□□□□ -0.72
DDX55-203ENST00000421670 UBE2WQ96B02 151 aa10.58□□□□□ -0.72
DDX55-203ENST00000421670 TIMM21Q9BVV7 248 aa10.58□□□□□ -0.72
DDX55-203ENST00000421670 Q9HAA7 133 aa10.58□□□□□ -0.72
DDX55-203ENST00000421670 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
DDX55-203ENST00000421670 IBA57-AS1B1ANH7 110 aa10.57□□□□□ -0.72
DDX55-203ENST00000421670 K7EP13 123 aa10.57□□□□□ -0.72
DDX55-203ENST00000421670 G0S2P27469 103 aa10.57□□□□□ -0.72
DDX55-203ENST00000421670 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
DDX55-203ENST00000421670 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
DDX55-203ENST00000421670 CDC42SE2Q9NRR3 84 aa10.57□□□□□ -0.72
DDX55-203ENST00000421670 CSDC2Q9Y534 153 aaKnown RBP10.57□□□□□ -0.72
DDX55-203ENST00000421670 IGKV3OR2-268A0A0C4DH90 116 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 CRPP02741 224 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 NDUFA6P56556 154 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 ZNF664Q8N3J9 261 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 PYGO1Q9Y3Y4 419 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 IGLV4-3A0A075B6K6 122 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 IGIPA6NJ69 53 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 REG3AQ06141 175 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 ENHOQ6UWT2 76 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 SCGB3A1Q96QR1 104 aa10.56□□□□□ -0.72
DDX55-203ENST00000421670 PRR34Q9NV39 138 aa10.55□□□□□ -0.72
DDX55-203ENST00000421670 ERASQ7Z444 233 aa10.54□□□□□ -0.72
DDX55-203ENST00000421670 TIMM17AQ99595 171 aa10.54□□□□□ -0.72
DDX55-203ENST00000421670 IGLV10-54A0A075B6I4 117 aa10.53□□□□□ -0.72
DDX55-203ENST00000421670 MRPS36P82909 103 aaKnown RBP10.53□□□□□ -0.72
DDX55-203ENST00000421670 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
DDX55-203ENST00000421670 COA6Q5JTJ3 125 aaKnown RBP10.53□□□□□ -0.72
DDX55-203ENST00000421670 ZC2HC1BQ5TFG8 222 aa10.53□□□□□ -0.72
DDX55-203ENST00000421670 TMEM141Q96I45 108 aa10.53□□□□□ -0.72
DDX55-203ENST00000421670 TRAV8-3A0A0A6YYJ7 113 aa10.52□□□□□ -0.72
DDX55-203ENST00000421670 LINC01549A6NIU2 74 aa10.52□□□□□ -0.72
DDX55-203ENST00000421670 DNAH17Q9UFH2 4485 aa10.52□□□□□ -0.73
DDX55-203ENST00000421670 MIAQ16674 131 aa10.52□□□□□ -0.73
DDX55-203ENST00000421670 Q6ZN92 141 aa10.52□□□□□ -0.73
DDX55-203ENST00000421670 LINC00173Q6ZV60 143 aa10.52□□□□□ -0.73
DDX55-203ENST00000421670 C6orf223Q8N319 242 aa10.52□□□□□ -0.73
DDX55-203ENST00000421670 IFITM10A6NMD0 228 aa10.51□□□□□ -0.73
DDX55-203ENST00000421670 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.51□□□□□ -0.73
DDX55-203ENST00000421670 FAT2Q9NYQ8 4349 aa10.51□□□□□ -0.73
DDX55-203ENST00000421670 IGKV2D-24A0A075B6R9 120 aa10.5□□□□□ -0.73
DDX55-203ENST00000421670 TRAV13-1A0A0B4J241 112 aa10.5□□□□□ -0.73
DDX55-203ENST00000421670 NPSP0C0P6 89 aa10.5□□□□□ -0.73
DDX55-203ENST00000421670 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
DDX55-203ENST00000421670 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
DDX55-203ENST00000421670 C1orf43Q9BWL3 253 aa10.5□□□□□ -0.73
DDX55-203ENST00000421670 LINC00959A0A1B0GUT2 108 aa10.49□□□□□ -0.73
DDX55-203ENST00000421670 LEPROTL1O95214 131 aa10.49□□□□□ -0.73
DDX55-203ENST00000421670 FABP4P15090 132 aa10.49□□□□□ -0.73
DDX55-203ENST00000421670 BAALCQ8WXS3 180 aa10.49□□□□□ -0.73
DDX55-203ENST00000421670 AMELXQ99217 191 aa10.49□□□□□ -0.73
DDX55-203ENST00000421670 VCX2Q9H322 139 aa10.49□□□□□ -0.73
DDX55-203ENST00000421670 ATP5LO75964 103 aa10.48□□□□□ -0.73
DDX55-203ENST00000421670 S100A6P06703 90 aa10.48□□□□□ -0.73
DDX55-203ENST00000421670 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
DDX55-203ENST00000421670 PAPPA-AS1Q5QFB9 102 aa10.48□□□□□ -0.73
DDX55-203ENST00000421670 NFE4Q86UQ8 179 aa10.48□□□□□ -0.73
DDX55-203ENST00000421670 IFI27L1Q96BM0 104 aa10.48□□□□□ -0.73
DDX55-203ENST00000421670 C2orf88Q9BSF0 95 aa10.48□□□□□ -0.73
DDX55-203ENST00000421670 TMA7Q9Y2S6 64 aaKnown RBP10.48□□□□□ -0.73
DDX55-203ENST00000421670 TRAV8-4A0A0B4J246 113 aa10.47□□□□□ -0.73
DDX55-203ENST00000421670 CCL25O15444 150 aa10.47□□□□□ -0.73
DDX55-203ENST00000421670 XCL1P47992 114 aa10.47□□□□□ -0.73
DDX55-203ENST00000421670 CHCHD10Q8WYQ3 142 aaPredicted RBP10.47□□□□□ -0.73
DDX55-203ENST00000421670 RMI2Q96E14 147 aa10.47□□□□□ -0.73
DDX55-203ENST00000421670 RTL8CO15255 209 aa10.46□□□□□ -0.74
DDX55-203ENST00000421670 SS18Q15532 418 aa10.46□□□□□ -0.74
DDX55-203ENST00000421670 KRTAP26-1Q6PEX3 210 aa10.46□□□□□ -0.74
DDX55-203ENST00000421670 PRSS29PA6NIE9 313 aa10.45□□□□□ -0.74
DDX55-203ENST00000421670 PSCAO43653 123 aa10.45□□□□□ -0.74
DDX55-203ENST00000421670 UBE2D1P51668 147 aa10.45□□□□□ -0.74
DDX55-203ENST00000421670 PMVKQ15126 192 aa10.45□□□□□ -0.74
DDX55-203ENST00000421670 GAGE12HA6NDE8 117 aa10.44□□□□□ -0.74
DDX55-203ENST00000421670 H0Y8G0 127 aa10.44□□□□□ -0.74
DDX55-203ENST00000421670 SNRPEP62304 92 aaKnown RBP10.44□□□□□ -0.74
DDX55-203ENST00000421670 HIST3H2BBQ8N257 126 aa10.44□□□□□ -0.74
DDX55-203ENST00000421670 MAPKAPK5-AS1Q8N8E1 139 aa10.44□□□□□ -0.74
DDX55-203ENST00000421670 TM2D2Q9BX73 214 aa10.44□□□□□ -0.74
DDX55-203ENST00000421670 CST9LQ9H4G1 147 aa10.44□□□□□ -0.74
DDX55-203ENST00000421670 HSPB8Q9UJY1 196 aa10.44□□□□□ -0.74
DDX55-203ENST00000421670 PKD1P98161 4303 aa10.44□□□□□ -0.74
DDX55-203ENST00000421670 PRSS1P07477 247 aa10.43□□□□□ -0.74
DDX55-203ENST00000421670 LINC00242Q5T6M2 205 aa10.43□□□□□ -0.74
DDX55-203ENST00000421670 COX11Q9Y6N1 276 aa10.43□□□□□ -0.74
DDX55-203ENST00000421670 FOXI1Q12951 378 aa10.42□□□□□ -0.74
DDX55-203ENST00000421670 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
DDX55-203ENST00000421670 C5orf52A6NGY3 159 aa10.41□□□□□ -0.74
DDX55-203ENST00000421670 LECT2O14960 151 aa10.41□□□□□ -0.74
DDX55-203ENST00000421670 COX6A2Q02221 97 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms