RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 F5H697 171 aa13.23□□□□□ -0.29
PPFIA3-202ENST00000421230 LINC01600Q96MT4 127 aa13.23□□□□□ -0.29
PPFIA3-202ENST00000421230 C9JAW5 83 aa13.22□□□□□ -0.29
PPFIA3-202ENST00000421230 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
PPFIA3-202ENST00000421230 PKD1L1Q8TDX9 2849 aa13.22□□□□□ -0.29
PPFIA3-202ENST00000421230 RHOHQ15669 191 aa13.21□□□□□ -0.29
PPFIA3-202ENST00000421230 TRPT1Q86TN4 253 aaKnown RBP13.21□□□□□ -0.29
PPFIA3-202ENST00000421230 C9orf66Q5T8R8 295 aa13.21□□□□□ -0.29
PPFIA3-202ENST00000421230 SPXQ9BT56 116 aa13.21□□□□□ -0.29
PPFIA3-202ENST00000421230 MUSTN1Q8IVN3 82 aa13.2□□□□□ -0.3
PPFIA3-202ENST00000421230 C9orf85Q96MD7 179 aa13.2□□□□□ -0.3
PPFIA3-202ENST00000421230 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
PPFIA3-202ENST00000421230 H3BMM0 161 aa13.2□□□□□ -0.3
PPFIA3-202ENST00000421230 M0QY20 66 aa13.2□□□□□ -0.3
PPFIA3-202ENST00000421230 BEAN1Q3B7T3 259 aa13.2□□□□□ -0.3
PPFIA3-202ENST00000421230 ANAPC13Q9BS18 74 aa13.2□□□□□ -0.3
PPFIA3-202ENST00000421230 ZNF22P17026 224 aaPredicted RBP13.19□□□□□ -0.3
PPFIA3-202ENST00000421230 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
PPFIA3-202ENST00000421230 WFDC10AQ9H1F0 79 aa13.19□□□□□ -0.3
PPFIA3-202ENST00000421230 M0R2P5 195 aa13.19□□□□□ -0.3
PPFIA3-202ENST00000421230 RHODO00212 210 aa13.19□□□□□ -0.3
PPFIA3-202ENST00000421230 SPINK13Q1W4C9 94 aa13.19□□□□□ -0.3
PPFIA3-202ENST00000421230 TNFRSF18Q9Y5U5 241 aa13.19□□□□□ -0.3
PPFIA3-202ENST00000421230 TRAV12-2A0A075B6T6 113 aa13.18□□□□□ -0.3
PPFIA3-202ENST00000421230 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.18□□□□□ -0.3
PPFIA3-202ENST00000421230 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
PPFIA3-202ENST00000421230 TRAV12-3A0A0B4J271 114 aa13.17□□□□□ -0.3
PPFIA3-202ENST00000421230 IGHV3-16A0A0C4DH30 117 aa13.17□□□□□ -0.3
PPFIA3-202ENST00000421230 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
PPFIA3-202ENST00000421230 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
PPFIA3-202ENST00000421230 RBMY1DP0C7P1 496 aaKnown RBP13.17□□□□□ -0.3
PPFIA3-202ENST00000421230 HERV-K104P63124 156 aa13.17□□□□□ -0.3
PPFIA3-202ENST00000421230 C20orf203Q8NBC4 194 aa13.17□□□□□ -0.3
PPFIA3-202ENST00000421230 CMYA5Q8N3K9 4069 aa13.17□□□□□ -0.3
PPFIA3-202ENST00000421230 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
PPFIA3-202ENST00000421230 LINC01620Q4KN68 170 aa13.16□□□□□ -0.3
PPFIA3-202ENST00000421230 Q8N1Y9 231 aa13.16□□□□□ -0.3
PPFIA3-202ENST00000421230 NHLRC4P0CG21 123 aaPredicted RBP13.16□□□□□ -0.3
PPFIA3-202ENST00000421230 FAM74A4Q5TZK3 123 aa13.16□□□□□ -0.3
PPFIA3-202ENST00000421230 ODF3Q96PU9 254 aa13.16□□□□□ -0.3
PPFIA3-202ENST00000421230 C19orf73Q9NVV2 129 aa13.16□□□□□ -0.3
PPFIA3-202ENST00000421230 H7C2G1 150 aa13.15□□□□□ -0.3
PPFIA3-202ENST00000421230 ANK2Q01484 3957 aa13.15□□□□□ -0.31
PPFIA3-202ENST00000421230 A0A0J9YXY3 114 aa13.15□□□□□ -0.31
PPFIA3-202ENST00000421230 TRBV30A0A0K0K1B3 111 aa13.15□□□□□ -0.31
PPFIA3-202ENST00000421230 RPL13AP40429 203 aaKnown RBP13.15□□□□□ -0.31
PPFIA3-202ENST00000421230 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.31
PPFIA3-202ENST00000421230 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
PPFIA3-202ENST00000421230 A0A0J9YXV3 536 aa13.14□□□□□ -0.31
PPFIA3-202ENST00000421230 ZNF56Q15929 161 aa13.14□□□□□ -0.31
PPFIA3-202ENST00000421230 STHQ8IWL8 128 aa13.14□□□□□ -0.31
PPFIA3-202ENST00000421230 MDFIQ99750 246 aa13.14□□□□□ -0.31
PPFIA3-202ENST00000421230 IGHV3-64A0A075B6Q5 118 aa13.13□□□□□ -0.31
PPFIA3-202ENST00000421230 A8MTW9 85 aa13.13□□□□□ -0.31
PPFIA3-202ENST00000421230 GAGE5Q13069 117 aa13.13□□□□□ -0.31
PPFIA3-202ENST00000421230 GAGE6Q13070 117 aa13.13□□□□□ -0.31
PPFIA3-202ENST00000421230 CMC4P56277 68 aaPredicted RBP13.13□□□□□ -0.31
PPFIA3-202ENST00000421230 LITAFQ99732 161 aa13.13□□□□□ -0.31
PPFIA3-202ENST00000421230 TRBV10-2A0A0K0K1G8 114 aa13.12□□□□□ -0.31
PPFIA3-202ENST00000421230 I3L3M4 83 aa13.12□□□□□ -0.31
PPFIA3-202ENST00000421230 GAGE2BQ13066 116 aa13.12□□□□□ -0.31
PPFIA3-202ENST00000421230 GAGE2EQ4V326 116 aa13.12□□□□□ -0.31
PPFIA3-202ENST00000421230 GAGE2DQ9UEU5 116 aa13.12□□□□□ -0.31
PPFIA3-202ENST00000421230 TRAV4A0A0B4J268 109 aa13.11□□□□□ -0.31
PPFIA3-202ENST00000421230 SNCGO76070 127 aa13.11□□□□□ -0.31
PPFIA3-202ENST00000421230 Q1RN00 199 aa13.11□□□□□ -0.31
PPFIA3-202ENST00000421230 OXLD1Q5BKU9 147 aa13.11□□□□□ -0.31
PPFIA3-202ENST00000421230 TRIAP1O43715 76 aa13.11□□□□□ -0.31
PPFIA3-202ENST00000421230 Q6Q795 121 aa13.11□□□□□ -0.31
PPFIA3-202ENST00000421230 IGHV3-30-3P0DP02 117 aa13.1□□□□□ -0.31
PPFIA3-202ENST00000421230 FAM104AQ969W3 186 aa13.1□□□□□ -0.31
PPFIA3-202ENST00000421230 RBMY1A1P0DJD3 496 aaKnown RBP13.09□□□□□ -0.31
PPFIA3-202ENST00000421230 RBMY1CP0DJD4 496 aa13.09□□□□□ -0.31
PPFIA3-202ENST00000421230 NDUFV3P56181 108 aaKnown RBP13.09□□□□□ -0.31
PPFIA3-202ENST00000421230 RBMY1FQ15415 496 aaKnown RBP13.09□□□□□ -0.31
PPFIA3-202ENST00000421230 PYGO1Q9Y3Y4 419 aa13.09□□□□□ -0.31
PPFIA3-202ENST00000421230 TEX49A0A1B0GTD5 131 aa13.09□□□□□ -0.31
PPFIA3-202ENST00000421230 RPL35AP18077 110 aaKnown RBP13.09□□□□□ -0.31
PPFIA3-202ENST00000421230 SS18L2Q9UHA2 77 aa13.09□□□□□ -0.31
PPFIA3-202ENST00000421230 MRPS36P82909 103 aaKnown RBP13.08□□□□□ -0.32
PPFIA3-202ENST00000421230 XCL2Q9UBD3 114 aa13.08□□□□□ -0.32
PPFIA3-202ENST00000421230 IGHV1OR15-1A0A075B7D0 117 aa13.08□□□□□ -0.32
PPFIA3-202ENST00000421230 TRAV8-4A0A0B4J246 113 aa13.07□□□□□ -0.32
PPFIA3-202ENST00000421230 WIPF1O43516 503 aa13.07□□□□□ -0.32
PPFIA3-202ENST00000421230 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
PPFIA3-202ENST00000421230 SPANXCQ9NY87 97 aa13.07□□□□□ -0.32
PPFIA3-202ENST00000421230 TIMM21Q9BVV7 248 aa13.07□□□□□ -0.32
PPFIA3-202ENST00000421230 UBE2WQ96B02 151 aa13.06□□□□□ -0.32
PPFIA3-202ENST00000421230 ADAMTSL4-AS1Q5T5F5 129 aa13.05□□□□□ -0.32
PPFIA3-202ENST00000421230 EDA2RQ9HAV5 297 aa13.05□□□□□ -0.32
PPFIA3-202ENST00000421230 ICOSQ9Y6W8 199 aa13.05□□□□□ -0.32
PPFIA3-202ENST00000421230 B5MCH6 92 aa13.05□□□□□ -0.32
PPFIA3-202ENST00000421230 H7C423 109 aa13.05□□□□□ -0.32
PPFIA3-202ENST00000421230 PRM2P04554 102 aa13.05□□□□□ -0.32
PPFIA3-202ENST00000421230 HTN1P15515 57 aa13.05□□□□□ -0.32
PPFIA3-202ENST00000421230 IGHV1-58A0A0C4DH39 117 aa13.04□□□□□ -0.32
PPFIA3-202ENST00000421230 IFITM1P13164 125 aa13.04□□□□□ -0.32
PPFIA3-202ENST00000421230 C2orf82Q6UX34 121 aa13.04□□□□□ -0.32
PPFIA3-202ENST00000421230 C15orf53Q8NAA6 179 aa13.04□□□□□ -0.32
PPFIA3-202ENST00000421230 TRAV8-3A0A0A6YYJ7 113 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms