RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SS18Q15532 418 aa10.41□□□□□ -0.74
UPF3AP3-201ENST00000420996 TRBV6-5A0A0K0K1A5 114 aa10.4□□□□□ -0.74
UPF3AP3-201ENST00000420996 K7EN84 100 aa10.4□□□□□ -0.74
UPF3AP3-201ENST00000420996 PTTG1IPP53801 180 aa10.4□□□□□ -0.74
UPF3AP3-201ENST00000420996 CD164L2Q6UWJ8 174 aa10.4□□□□□ -0.74
UPF3AP3-201ENST00000420996 OCC1Q8TAD7 63 aa10.4□□□□□ -0.74
UPF3AP3-201ENST00000420996 FAM210AQ96ND0 272 aa10.4□□□□□ -0.74
UPF3AP3-201ENST00000420996 GAS8-AS1O95177 125 aa10.39□□□□□ -0.75
UPF3AP3-201ENST00000420996 LOC107984640A0A0U1RRK4 108 aa10.38□□□□□ -0.75
UPF3AP3-201ENST00000420996 TSHBP01222 138 aa10.38□□□□□ -0.75
UPF3AP3-201ENST00000420996 TAGLN2P37802 199 aaKnown RBP10.38□□□□□ -0.75
UPF3AP3-201ENST00000420996 CAMPP49913 170 aa10.38□□□□□ -0.75
UPF3AP3-201ENST00000420996 MRPL52Q86TS9 123 aaKnown RBP10.38□□□□□ -0.75
UPF3AP3-201ENST00000420996 AKAP14Q86UN6 197 aa10.38□□□□□ -0.75
UPF3AP3-201ENST00000420996 ISOC2Q96AB3 205 aa10.38□□□□□ -0.75
UPF3AP3-201ENST00000420996 MRAP2Q96G30 205 aa10.38□□□□□ -0.75
UPF3AP3-201ENST00000420996 CDC42SE2Q9NRR3 84 aa10.38□□□□□ -0.75
UPF3AP3-201ENST00000420996 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
UPF3AP3-201ENST00000420996 ST20Q9HBF5 79 aa10.37□□□□□ -0.75
UPF3AP3-201ENST00000420996 ZNF664Q8N3J9 261 aa10.36□□□□□ -0.75
UPF3AP3-201ENST00000420996 TMEM242Q9NWH2 141 aa10.36□□□□□ -0.75
UPF3AP3-201ENST00000420996 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
UPF3AP3-201ENST00000420996 A0A1W2PNN7 141 aa10.35□□□□□ -0.75
UPF3AP3-201ENST00000420996 A8MWL6 223 aa10.35□□□□□ -0.75
UPF3AP3-201ENST00000420996 GATCO43716 136 aaKnown RBP10.35□□□□□ -0.75
UPF3AP3-201ENST00000420996 POLR2KP53803 58 aaKnown RBP10.34□□□□□ -0.75
UPF3AP3-201ENST00000420996 SLC51BQ86UW2 128 aa10.34□□□□□ -0.75
UPF3AP3-201ENST00000420996 NUP35Q8NFH5 326 aa10.34□□□□□ -0.75
UPF3AP3-201ENST00000420996 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
UPF3AP3-201ENST00000420996 TRBV27A0A0K0K1C4 114 aa10.33□□□□□ -0.76
UPF3AP3-201ENST00000420996 C7orf77A4D0Y5 90 aa10.33□□□□□ -0.76
UPF3AP3-201ENST00000420996 C1orf196B1AJZ1 125 aa10.33□□□□□ -0.76
UPF3AP3-201ENST00000420996 COX7A2LO14548 114 aa10.33□□□□□ -0.76
UPF3AP3-201ENST00000420996 MALP21145 153 aa10.33□□□□□ -0.76
UPF3AP3-201ENST00000420996 FAM231DQ6ZW35 169 aa10.33□□□□□ -0.76
UPF3AP3-201ENST00000420996 APOMO95445 188 aa10.32□□□□□ -0.76
UPF3AP3-201ENST00000420996 MT-ND6P03923 174 aa10.32□□□□□ -0.76
UPF3AP3-201ENST00000420996 C9orf116Q5BN46 136 aaPredicted RBP10.32□□□□□ -0.76
UPF3AP3-201ENST00000420996 CAMK2N2Q96S95 79 aa10.32□□□□□ -0.76
UPF3AP3-201ENST00000420996 BORCS7Q96B45 105 aa10.31□□□□□ -0.76
UPF3AP3-201ENST00000420996 C2orf48Q96LS8 159 aa10.31□□□□□ -0.76
UPF3AP3-201ENST00000420996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
UPF3AP3-201ENST00000420996 CT83Q5H943 113 aa10.3□□□□□ -0.76
UPF3AP3-201ENST00000420996 TMEM191AQ9H0A3 160 aa10.3□□□□□ -0.76
UPF3AP3-201ENST00000420996 CSDC2Q9Y534 153 aaKnown RBP10.3□□□□□ -0.76
UPF3AP3-201ENST00000420996 TMEM250H0YL14 139 aa10.29□□□□□ -0.76
UPF3AP3-201ENST00000420996 RAB4AP20338 218 aa10.29□□□□□ -0.76
UPF3AP3-201ENST00000420996 SMAGPQ0VAQ4 97 aa10.29□□□□□ -0.76
UPF3AP3-201ENST00000420996 C1orf137Q5JT78 98 aa10.29□□□□□ -0.76
UPF3AP3-201ENST00000420996 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
UPF3AP3-201ENST00000420996 A0A1B0GUT8 65 aa10.28□□□□□ -0.76
UPF3AP3-201ENST00000420996 VCYO14598 125 aa10.28□□□□□ -0.76
UPF3AP3-201ENST00000420996 FCER1GP30273 86 aa10.27□□□□□ -0.77
UPF3AP3-201ENST00000420996 RPL18AQ02543 176 aaKnown RBP10.27□□□□□ -0.77
UPF3AP3-201ENST00000420996 RNF151Q2KHN1 245 aa10.27□□□□□ -0.77
UPF3AP3-201ENST00000420996 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
UPF3AP3-201ENST00000420996 UBE2D4Q9Y2X8 147 aa10.27□□□□□ -0.77
UPF3AP3-201ENST00000420996 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
UPF3AP3-201ENST00000420996 RNASE13Q5GAN3 156 aaKnown RBP10.26□□□□□ -0.77
UPF3AP3-201ENST00000420996 C5orf38Q86SI9 138 aa10.26□□□□□ -0.77
UPF3AP3-201ENST00000420996 AMN1Q8IY45 258 aa10.26□□□□□ -0.77
UPF3AP3-201ENST00000420996 DIRC1Q969H9 104 aa10.26□□□□□ -0.77
UPF3AP3-201ENST00000420996 OPRPNQ99935 248 aaPredicted RBP10.26□□□□□ -0.77
UPF3AP3-201ENST00000420996 LPAP08519 4548 aa10.26□□□□□ -0.77
UPF3AP3-201ENST00000420996 HIGD1CA8MV81 97 aa10.25□□□□□ -0.77
UPF3AP3-201ENST00000420996 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
UPF3AP3-201ENST00000420996 PRR26Q8N8Z3 221 aa10.25□□□□□ -0.77
UPF3AP3-201ENST00000420996 TSKUQ8WUA8 353 aa10.25□□□□□ -0.77
UPF3AP3-201ENST00000420996 PPP1R17O96001 155 aa10.24□□□□□ -0.77
UPF3AP3-201ENST00000420996 SPAG11BQ08648 103 aa10.24□□□□□ -0.77
UPF3AP3-201ENST00000420996 SMKR1H3BMG3 65 aa10.23□□□□□ -0.77
UPF3AP3-201ENST00000420996 SUMO2P61956 95 aaKnown RBP10.23□□□□□ -0.77
UPF3AP3-201ENST00000420996 KIR2DL4Q99706 377 aa10.23□□□□□ -0.77
UPF3AP3-201ENST00000420996 TIMM21Q9BVV7 248 aa10.23□□□□□ -0.77
UPF3AP3-201ENST00000420996 F8WDY8 70 aa10.22□□□□□ -0.77
UPF3AP3-201ENST00000420996 Q6ZUT4 128 aa10.22□□□□□ -0.77
UPF3AP3-201ENST00000420996 NRACQ8N912 160 aa10.22□□□□□ -0.77
UPF3AP3-201ENST00000420996 OR10D4PQ8NGN7 298 aa10.22□□□□□ -0.77
UPF3AP3-201ENST00000420996 MRPL35Q9NZE8 188 aaKnown RBP10.22□□□□□ -0.77
UPF3AP3-201ENST00000420996 A0A087WZ39 114 aa10.21□□□□□ -0.77
UPF3AP3-201ENST00000420996 H0Y9J4 135 aa10.21□□□□□ -0.77
UPF3AP3-201ENST00000420996 CEBPGP53567 150 aa10.21□□□□□ -0.77
UPF3AP3-201ENST00000420996 LINC01551Q86U37 167 aa10.21□□□□□ -0.77
UPF3AP3-201ENST00000420996 TMEM18Q96B42 140 aa10.21□□□□□ -0.77
UPF3AP3-201ENST00000420996 IMMP2LQ96T52 175 aa10.21□□□□□ -0.77
UPF3AP3-201ENST00000420996 OSTCQ9NRP0 149 aa10.21□□□□□ -0.77
UPF3AP3-201ENST00000420996 PPP1R2P9O14990 202 aa10.2□□□□□ -0.78
UPF3AP3-201ENST00000420996 BLOC1S1P78537 153 aa10.2□□□□□ -0.78
UPF3AP3-201ENST00000420996 RIGQ13278 110 aa10.2□□□□□ -0.78
UPF3AP3-201ENST00000420996 IGLV1-50A0A075B6I6 118 aa10.19□□□□□ -0.78
UPF3AP3-201ENST00000420996 SMIM7Q9BQ49 75 aa10.19□□□□□ -0.78
UPF3AP3-201ENST00000420996 NDUFA1O15239 70 aa10.18□□□□□ -0.78
UPF3AP3-201ENST00000420996 TLX1NBP0CAT3 122 aa10.18□□□□□ -0.78
UPF3AP3-201ENST00000420996 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
UPF3AP3-201ENST00000420996 ORAOV1Q8WV07 137 aa10.18□□□□□ -0.78
UPF3AP3-201ENST00000420996 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
UPF3AP3-201ENST00000420996 FAM168BA1KXE4 195 aa10.17□□□□□ -0.78
UPF3AP3-201ENST00000420996 TMEM241Q24JQ0 296 aa10.17□□□□□ -0.78
UPF3AP3-201ENST00000420996 KRTAP3-3Q9BYR6 98 aa10.17□□□□□ -0.78
UPF3AP3-201ENST00000420996 KRTAP3-2Q9BYR7 98 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms