RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 AMTP48728 403 aa6.07□□□□□ -1.44
NUP50-205ENST00000419387 SDIM1Q6ZPB5 146 aa6.07□□□□□ -1.44
NUP50-205ENST00000419387 SMIM15Q7Z3B0 74 aa6.07□□□□□ -1.44
NUP50-205ENST00000419387 ANAPC16Q96DE5 110 aa6.07□□□□□ -1.44
NUP50-205ENST00000419387 hDV102S1A0JD36 115 aa6.06□□□□□ -1.44
NUP50-205ENST00000419387 C7orf77A4D0Y5 90 aa6.06□□□□□ -1.44
NUP50-205ENST00000419387 PPP1R2P9O14990 202 aa6.06□□□□□ -1.44
NUP50-205ENST00000419387 MT-ND4LP03901 98 aa6.06□□□□□ -1.44
NUP50-205ENST00000419387 CNBPP62633 177 aaKnown RBP6.06□□□□□ -1.44
NUP50-205ENST00000419387 KRTAP4-11Q9BYQ6 195 aa6.06□□□□□ -1.44
NUP50-205ENST00000419387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
NUP50-205ENST00000419387 PANO1I0J062 215 aa6.05□□□□□ -1.44
NUP50-205ENST00000419387 OXTP01178 125 aa6.05□□□□□ -1.44
NUP50-205ENST00000419387 RPS10P46783 165 aaKnown RBP6.05□□□□□ -1.44
NUP50-205ENST00000419387 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
NUP50-205ENST00000419387 RIGQ13278 110 aa6.05□□□□□ -1.44
NUP50-205ENST00000419387 FAM104BQ5XKR9 115 aa6.05□□□□□ -1.44
NUP50-205ENST00000419387 AMN1Q8IY45 258 aa6.05□□□□□ -1.44
NUP50-205ENST00000419387 RPL39LQ96EH5 51 aaKnown RBP6.05□□□□□ -1.44
NUP50-205ENST00000419387 AP5S1Q9NUS5 200 aa6.05□□□□□ -1.44
NUP50-205ENST00000419387 TMEM242Q9NWH2 141 aa6.05□□□□□ -1.44
NUP50-205ENST00000419387 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.04□□□□□ -1.44
NUP50-205ENST00000419387 H7C423 109 aa6.04□□□□□ -1.44
NUP50-205ENST00000419387 NCR2O95944 276 aa6.04□□□□□ -1.44
NUP50-205ENST00000419387 SLPIP03973 132 aa6.04□□□□□ -1.44
NUP50-205ENST00000419387 MRPL51Q4U2R6 128 aaKnown RBP6.04□□□□□ -1.44
NUP50-205ENST00000419387 AMMECR1LQ6DCA0 310 aa6.04□□□□□ -1.44
NUP50-205ENST00000419387 MRPL54Q6P161 138 aaKnown RBP6.04□□□□□ -1.44
NUP50-205ENST00000419387 NRACQ8N912 160 aa6.04□□□□□ -1.44
NUP50-205ENST00000419387 IMMP2LQ96T52 175 aa6.04□□□□□ -1.44
NUP50-205ENST00000419387 IGHV3-64A0A075B6Q5 118 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 IGKV3OR2-268A0A0C4DH90 116 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 TRBV6-5A0A0K0K1A5 114 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 GAGE12HA6NDE8 117 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 SDHAF1A6NFY7 115 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 APCSP02743 223 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 CAMPP49913 170 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 POLR2KP53803 58 aaKnown RBP6.03□□□□□ -1.44
NUP50-205ENST00000419387 CIRBPQ14011 172 aaKnown RBP6.03□□□□□ -1.44
NUP50-205ENST00000419387 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 DPH3Q96FX2 82 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 CTDSP1Q9GZU7 261 aa6.03□□□□□ -1.44
NUP50-205ENST00000419387 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
NUP50-205ENST00000419387 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 TRBV24-1A0A075B6N3 115 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.02□□□□□ -1.45
NUP50-205ENST00000419387 A0A1B0GW15 77 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 IGKV2-29A2NJV5 120 aaPredicted RBP6.02□□□□□ -1.45
NUP50-205ENST00000419387 SMKR1H3BMG3 65 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 I3L3M4 83 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 PMCHP20382 165 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 HBBP68871 147 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 RNASEKQ6P5S7 137 aaKnown RBP6.02□□□□□ -1.45
NUP50-205ENST00000419387 ATP5L2Q7Z4Y8 100 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 C15orf56Q8N910 161 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 BORCS7Q96B45 105 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 YPEL4Q96NS1 127 aa6.02□□□□□ -1.45
NUP50-205ENST00000419387 APOC3P02656 99 aa6.01□□□□□ -1.45
NUP50-205ENST00000419387 FGF6P10767 208 aa6.01□□□□□ -1.45
NUP50-205ENST00000419387 RHEBQ15382 184 aa6.01□□□□□ -1.45
NUP50-205ENST00000419387 SERTAD4-AS1Q5TG53 156 aa6.01□□□□□ -1.45
NUP50-205ENST00000419387 CHCHD10Q8WYQ3 142 aaPredicted RBP6.01□□□□□ -1.45
NUP50-205ENST00000419387 MRAP2Q96G30 205 aa6.01□□□□□ -1.45
NUP50-205ENST00000419387 A0A087WYN8 130 aa6□□□□□ -1.45
NUP50-205ENST00000419387 ZNF25P17030 456 aaPredicted RBP6□□□□□ -1.45
NUP50-205ENST00000419387 HNRNPA3P51991 378 aaKnown RBP6□□□□□ -1.45
NUP50-205ENST00000419387 TMEM136Q6ZRR5 245 aa6□□□□□ -1.45
NUP50-205ENST00000419387 OR5A1Q8NGJ0 315 aa6□□□□□ -1.45
NUP50-205ENST00000419387 TMEM101Q96IK0 257 aa6□□□□□ -1.45
NUP50-205ENST00000419387 BTF3L4Q96K17 158 aa6□□□□□ -1.45
NUP50-205ENST00000419387 ST20Q9HBF5 79 aa6□□□□□ -1.45
NUP50-205ENST00000419387 TRAV9-1A0A075B6T8 112 aa5.99□□□□□ -1.45
NUP50-205ENST00000419387 TRBV27A0A0K0K1C4 114 aa5.99□□□□□ -1.45
NUP50-205ENST00000419387 PRSS47A8MTI9 375 aa5.99□□□□□ -1.45
NUP50-205ENST00000419387 TSHBP01222 138 aa5.99□□□□□ -1.45
NUP50-205ENST00000419387 CHTF8P0CG12 524 aa5.99□□□□□ -1.45
NUP50-205ENST00000419387 ESDP10768 282 aa5.99□□□□□ -1.45
NUP50-205ENST00000419387 HIGD2BQ4VC39 106 aa5.99□□□□□ -1.45
NUP50-205ENST00000419387 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
NUP50-205ENST00000419387 RPS10P5Q9NQ39 176 aa5.99□□□□□ -1.45
NUP50-205ENST00000419387 LINC00959A0A1B0GUT2 108 aa5.98□□□□□ -1.45
NUP50-205ENST00000419387 D6R8Y8 96 aa5.98□□□□□ -1.45
NUP50-205ENST00000419387 TNFRSF6BO95407 300 aa5.98□□□□□ -1.45
NUP50-205ENST00000419387 NPYP01303 97 aa5.98□□□□□ -1.45
NUP50-205ENST00000419387 COX6A2Q02221 97 aa5.98□□□□□ -1.45
NUP50-205ENST00000419387 FOXI1Q12951 378 aa5.98□□□□□ -1.45
NUP50-205ENST00000419387 SVBPQ8N300 66 aa5.98□□□□□ -1.45
NUP50-205ENST00000419387 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
NUP50-205ENST00000419387 GVQW2A0A096LPI5 108 aaPredicted RBP5.97□□□□□ -1.45
NUP50-205ENST00000419387 CCL25O15444 150 aa5.97□□□□□ -1.45
NUP50-205ENST00000419387 SNAPINO95295 136 aa5.97□□□□□ -1.45
NUP50-205ENST00000419387 S100A8P05109 93 aa5.97□□□□□ -1.45
NUP50-205ENST00000419387 XCL1P47992 114 aa5.97□□□□□ -1.45
NUP50-205ENST00000419387 SUMO2P61956 95 aaKnown RBP5.97□□□□□ -1.45
NUP50-205ENST00000419387 RPL32P62910 135 aaKnown RBP5.97□□□□□ -1.45
NUP50-205ENST00000419387 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
NUP50-205ENST00000419387 Q6ZRU5 148 aa5.97□□□□□ -1.45
NUP50-205ENST00000419387 PRSS3P2Q8NHM4 247 aa5.97□□□□□ -1.45
NUP50-205ENST00000419387 FAM104AQ969W3 186 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms