RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 FCER1GP30273 86 aa10.59□□□□□ -0.71
LINC00404-201ENST00000418660 C15orf56Q8N910 161 aa10.59□□□□□ -0.71
LINC00404-201ENST00000418660 S100A8P05109 93 aa10.58□□□□□ -0.72
LINC00404-201ENST00000418660 CDC42SE2Q9NRR3 84 aa10.58□□□□□ -0.72
LINC00404-201ENST00000418660 IGHV3-64A0A075B6Q5 118 aa10.57□□□□□ -0.72
LINC00404-201ENST00000418660 LINC00959A0A1B0GUT2 108 aa10.57□□□□□ -0.72
LINC00404-201ENST00000418660 RAB14P61106 215 aa10.57□□□□□ -0.72
LINC00404-201ENST00000418660 FOXI1Q12951 378 aa10.57□□□□□ -0.72
LINC00404-201ENST00000418660 ZNF664Q8N3J9 261 aa10.57□□□□□ -0.72
LINC00404-201ENST00000418660 KIR2DL4Q99706 377 aa10.57□□□□□ -0.72
LINC00404-201ENST00000418660 C20orf78Q9BR46 151 aa10.57□□□□□ -0.72
LINC00404-201ENST00000418660 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.57□□□□□ -0.72
LINC00404-201ENST00000418660 TRBV24-1A0A075B6N3 115 aa10.56□□□□□ -0.72
LINC00404-201ENST00000418660 A0A1B0GXF2 115 aa10.56□□□□□ -0.72
LINC00404-201ENST00000418660 F8W036 122 aa10.56□□□□□ -0.72
LINC00404-201ENST00000418660 CKS2P33552 79 aa10.56□□□□□ -0.72
LINC00404-201ENST00000418660 HBBP68871 147 aa10.56□□□□□ -0.72
LINC00404-201ENST00000418660 MRPL54Q6P161 138 aaKnown RBP10.56□□□□□ -0.72
LINC00404-201ENST00000418660 PANO1I0J062 215 aa10.55□□□□□ -0.72
LINC00404-201ENST00000418660 CCL25O15444 150 aa10.55□□□□□ -0.72
LINC00404-201ENST00000418660 XCL1P47992 114 aa10.55□□□□□ -0.72
LINC00404-201ENST00000418660 RPL32P62910 135 aaKnown RBP10.55□□□□□ -0.72
LINC00404-201ENST00000418660 SMAGPQ0VAQ4 97 aa10.55□□□□□ -0.72
LINC00404-201ENST00000418660 SS18Q15532 418 aa10.55□□□□□ -0.72
LINC00404-201ENST00000418660 HIGD2BQ4VC39 106 aa10.55□□□□□ -0.72
LINC00404-201ENST00000418660 CSDC2Q9Y534 153 aaKnown RBP10.55□□□□□ -0.72
LINC00404-201ENST00000418660 GVQW2A0A096LPI5 108 aaPredicted RBP10.54□□□□□ -0.72
LINC00404-201ENST00000418660 TNFRSF6BO95407 300 aa10.54□□□□□ -0.72
LINC00404-201ENST00000418660 KRTAP10-4P60372 401 aaPredicted RBP10.54□□□□□ -0.72
LINC00404-201ENST00000418660 CIRBPQ14011 172 aaKnown RBP10.54□□□□□ -0.72
LINC00404-201ENST00000418660 UBE2D4Q9Y2X8 147 aa10.54□□□□□ -0.72
LINC00404-201ENST00000418660 TCAPO15273 167 aa10.53□□□□□ -0.72
LINC00404-201ENST00000418660 PNRC1Q12796 327 aaPredicted RBP10.53□□□□□ -0.72
LINC00404-201ENST00000418660 ATP5L2Q7Z4Y8 100 aa10.53□□□□□ -0.72
LINC00404-201ENST00000418660 TMEM18Q96B42 140 aa10.53□□□□□ -0.72
LINC00404-201ENST00000418660 D6R8Y8 96 aa10.52□□□□□ -0.73
LINC00404-201ENST00000418660 PPBPP02775 128 aa10.52□□□□□ -0.73
LINC00404-201ENST00000418660 CD164L2Q6UWJ8 174 aa10.52□□□□□ -0.73
LINC00404-201ENST00000418660 TIMM21Q9BVV7 248 aa10.52□□□□□ -0.73
LINC00404-201ENST00000418660 FLG2Q5D862 2391 aaPredicted RBP10.52□□□□□ -0.73
LINC00404-201ENST00000418660 IGHV1-58A0A0C4DH39 117 aa10.51□□□□□ -0.73
LINC00404-201ENST00000418660 PHOX2AO14813 284 aa10.51□□□□□ -0.73
LINC00404-201ENST00000418660 SMIM2Q9BVW6 85 aa10.51□□□□□ -0.73
LINC00404-201ENST00000418660 C1orf196B1AJZ1 125 aa10.5□□□□□ -0.73
LINC00404-201ENST00000418660 MT-ND4LP03901 98 aa10.5□□□□□ -0.73
LINC00404-201ENST00000418660 RPL37AP61513 92 aaKnown RBP10.5□□□□□ -0.73
LINC00404-201ENST00000418660 CLLU1Q5K131 121 aa10.5□□□□□ -0.73
LINC00404-201ENST00000418660 ANAPC16Q96DE5 110 aa10.5□□□□□ -0.73
LINC00404-201ENST00000418660 DPH3Q96FX2 82 aa10.5□□□□□ -0.73
LINC00404-201ENST00000418660 NPYP01303 97 aa10.49□□□□□ -0.73
LINC00404-201ENST00000418660 CHTF8P0CG12 524 aa10.49□□□□□ -0.73
LINC00404-201ENST00000418660 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
LINC00404-201ENST00000418660 DMBT1Q9UGM3 2413 aaPredicted RBP10.49□□□□□ -0.73
LINC00404-201ENST00000418660 J3QL48 77 aa10.48□□□□□ -0.73
LINC00404-201ENST00000418660 COX6A2Q02221 97 aa10.48□□□□□ -0.73
LINC00404-201ENST00000418660 RNASE13Q5GAN3 156 aaKnown RBP10.48□□□□□ -0.73
LINC00404-201ENST00000418660 TMEM136Q6ZRR5 245 aa10.48□□□□□ -0.73
LINC00404-201ENST00000418660 ORMDL3Q8N138 153 aa10.48□□□□□ -0.73
LINC00404-201ENST00000418660 MYCBP2O75592 4640 aa10.48□□□□□ -0.73
LINC00404-201ENST00000418660 A0A087WYN8 130 aa10.47□□□□□ -0.73
LINC00404-201ENST00000418660 KRTAP29-1A8MX34 341 aaPredicted RBP10.47□□□□□ -0.73
LINC00404-201ENST00000418660 Q6ZUT4 128 aa10.47□□□□□ -0.73
LINC00404-201ENST00000418660 PRSS3P2Q8NHM4 247 aa10.47□□□□□ -0.73
LINC00404-201ENST00000418660 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.73
LINC00404-201ENST00000418660 RPL39P62891 51 aaKnown RBP10.46□□□□□ -0.73
LINC00404-201ENST00000418660 PRELID3AQ96N28 172 aa10.46□□□□□ -0.73
LINC00404-201ENST00000418660 ZNF561-AS1K7EIQ3 104 aa10.45□□□□□ -0.74
LINC00404-201ENST00000418660 COX7A2LO14548 114 aa10.45□□□□□ -0.74
LINC00404-201ENST00000418660 LINC00526Q96FQ7 95 aa10.45□□□□□ -0.74
LINC00404-201ENST00000418660 SPANXA1Q9NS26 97 aa10.45□□□□□ -0.74
LINC00404-201ENST00000418660 PLAC8Q9NZF1 115 aa10.45□□□□□ -0.74
LINC00404-201ENST00000418660 MALP21145 153 aa10.44□□□□□ -0.74
LINC00404-201ENST00000418660 PKIGQ9Y2B9 76 aa10.44□□□□□ -0.74
LINC00404-201ENST00000418660 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
LINC00404-201ENST00000418660 RAB5AP20339 215 aa10.43□□□□□ -0.74
LINC00404-201ENST00000418660 MRPS36P82909 103 aaKnown RBP10.43□□□□□ -0.74
LINC00404-201ENST00000418660 SYCNQ0VAF6 134 aa10.43□□□□□ -0.74
LINC00404-201ENST00000418660 FAM104AQ969W3 186 aa10.43□□□□□ -0.74
LINC00404-201ENST00000418660 CARD19Q96LW7 228 aa10.43□□□□□ -0.74
LINC00404-201ENST00000418660 LAMTOR2Q9Y2Q5 125 aa10.43□□□□□ -0.74
LINC00404-201ENST00000418660 IGKV2-24A0A0C4DH68 120 aa10.42□□□□□ -0.74
LINC00404-201ENST00000418660 IFITM2Q01629 132 aa10.42□□□□□ -0.74
LINC00404-201ENST00000418660 MAJINQ3KP22 176 aa10.42□□□□□ -0.74
LINC00404-201ENST00000418660 UQCC3Q6UW78 93 aa10.42□□□□□ -0.74
LINC00404-201ENST00000418660 IGLV4-69A0A075B6H9 119 aa10.41□□□□□ -0.74
LINC00404-201ENST00000418660 A0A096LNI7 61 aa10.41□□□□□ -0.74
LINC00404-201ENST00000418660 OXTP01178 125 aa10.41□□□□□ -0.74
LINC00404-201ENST00000418660 C5orf38Q86SI9 138 aa10.41□□□□□ -0.74
LINC00404-201ENST00000418660 OPRPNQ99935 248 aaPredicted RBP10.41□□□□□ -0.74
LINC00404-201ENST00000418660 LINC00474Q9P2X8 69 aa10.41□□□□□ -0.74
LINC00404-201ENST00000418660 APOMO95445 188 aa10.4□□□□□ -0.74
LINC00404-201ENST00000418660 HNRNPA3P51991 378 aaKnown RBP10.4□□□□□ -0.74
LINC00404-201ENST00000418660 STPG4Q8N801 248 aa10.4□□□□□ -0.74
LINC00404-201ENST00000418660 IMMP2LQ96T52 175 aa10.4□□□□□ -0.74
LINC00404-201ENST00000418660 MAP1LC3AQ9H492 121 aa10.4□□□□□ -0.74
LINC00404-201ENST00000418660 HERC1Q15751 4861 aa10.4□□□□□ -0.75
LINC00404-201ENST00000418660 LOC389332A0A1B0GUA5 103 aa10.39□□□□□ -0.75
LINC00404-201ENST00000418660 TMEM218A2RU14 115 aa10.39□□□□□ -0.75
LINC00404-201ENST00000418660 ADCYAP1P18509 176 aa10.39□□□□□ -0.75
LINC00404-201ENST00000418660 IFI27P40305 119 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms