RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 OR11H2Q8NH07 326 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 DNAJC30Q96LL9 226 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 EDA2RQ9HAV5 297 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 CYSLTR1Q9Y271 337 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 VPS13CQ709C8 3753 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 ZFHX3Q15911 3703 aa2.65□□□□□ -1.98
HMGB3P20-201ENST00000417997 A0A096LNJ9 63 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 TRBV10-1A0A0K0K1A3 114 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 TEX48A0A1B0GUV7 120 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 PLAC8L1A1L4L8 177 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 LINC01546A6NGU7 62 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 LYRM9A8MSI8 78 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 G3V4G9 280 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 M0QY20 66 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 P0DMU3 169 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 FAM231AP0DMU4 169 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 FAM231CP0DMU5 169 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 DEFB130BP0DP73 79 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 DEFB130AP0DP74 79 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 LINC00315P59091 139 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 DAD1P61803 113 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 PKIAP61925 76 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 EGFEM1PQ0D2K5 195 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 COTL1Q14019 142 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 SPATA45Q537H7 98 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 FAM222AQ5U5X8 452 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 C2orf66Q6UXQ4 117 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 TEX43Q6ZNM6 134 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 Q6ZR54 194 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 LINC00173Q6ZV60 143 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 ATOH7Q8N100 152 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 SCGB3A1Q96QR1 104 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 OVOL2Q9BRP0 275 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 PRADC1Q9BSG0 188 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 PRO1933Q9H354 126 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 TP53TG1Q9Y2A0 90 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 SVEP1Q4LDE5 3571 aa2.65□□□□□ -1.99
HMGB3P20-201ENST00000417997 MXRA5Q9NR99 2828 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 ZNF469Q96JG9 3925 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 F8P00451 2351 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 TRBV7-3A0A075B6L6 115 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 NBPF19A0A087WUL8 3843 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 IGHV3-38A0A0C4DH36 116 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 TRBV27A0A0K0K1C4 114 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 TRBV6-4A0A1B0GX49 114 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 UBE2L6O14933 153 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 DEFB4AO15263 64 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 POLR2KP53803 58 aaKnown RBP2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 RIPPLY3P57055 190 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 SMAGPQ0VAQ4 97 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 LINC01545Q5VT33 79 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 LGALS9CQ6DKI2 356 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 UFSP1Q6NVU6 142 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 Q8N976 141 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 ZNRF2Q8NHG8 242 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 DEFB104AQ8WTQ1 72 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 TOMM6Q96B49 74 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 C2orf48Q96LS8 159 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 PMCHL2Q9BQD1 86 aa2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 NSD1Q96L73 2696 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P20-201ENST00000417997 BAHCC1Q9P281 2608 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 TRAV9-2A0A087WT02 112 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 F8VRH5 84 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 DPM2O94777 84 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 IGKCP01834 107 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 ATP5G1P05496 136 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 SPART-AS1P0CW21 52 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 HTN3P15516 51 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 PLNP26678 52 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 RPL39P62891 51 aaKnown RBP2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 TMEM97Q5BJF2 176 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 ERASQ7Z444 233 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 SPATA12Q7Z6I5 190 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 DAZ4Q86SG3 579 aaKnown RBP2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 ZNF664Q8N3J9 261 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 SLC25A29Q8N8R3 303 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 Q8NAQ8 132 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 C20orf203Q8NBC4 194 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 TMEM141Q96I45 108 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 TIMM17AQ99595 171 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 C2orf88Q9BSF0 95 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 CHCHD5Q9BSY4 110 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 RETNQ9HD89 108 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 DAZ3Q9NR90 486 aaKnown RBP2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 CHTOPQ9Y3Y2 248 aaKnown RBP2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 ANK3Q12955 4377 aaKnown RBP2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 AKAP9Q99996 3911 aa2.63□□□□□ -1.99
HMGB3P20-201ENST00000417997 HIVEP1P15822 2718 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 TRBV25-1A0A075B6N4 114 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 A0A087WX48 190 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 TRAV12-1A0A0B4J245 112 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 LOC100131303A0A0U1RQF7 123 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 IGKV2-29A2NJV5 120 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 F5H768 121 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 DDTP30046 118 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 HNRNPA3P51991 378 aaKnown RBP2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 UBE2D3P61077 147 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 HERVK_113P61574 105 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms