RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 UBE2L6O14933 153 aa11.81□□□□□ -0.52
SSBP3-205ENST00000417664 BVES-AS1Q5T3Y7 98 aa11.81□□□□□ -0.52
SSBP3-205ENST00000417664 Q6ZUT4 128 aa11.81□□□□□ -0.52
SSBP3-205ENST00000417664 TRBV6-8A0A0A6YYG3 113 aa11.8□□□□□ -0.52
SSBP3-205ENST00000417664 A0A0J9YXV3 536 aa11.8□□□□□ -0.52
SSBP3-205ENST00000417664 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
SSBP3-205ENST00000417664 ATP5G1P05496 136 aa11.8□□□□□ -0.52
SSBP3-205ENST00000417664 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-205ENST00000417664 SAMD5Q5TGI4 173 aa11.8□□□□□ -0.52
SSBP3-205ENST00000417664 MAST4O15021 2626 aa11.79□□□□□ -0.52
SSBP3-205ENST00000417664 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
SSBP3-205ENST00000417664 GYPEP15421 78 aa11.79□□□□□ -0.52
SSBP3-205ENST00000417664 ZNF22P17026 224 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-205ENST00000417664 DEFB4AO15263 64 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 PAX4O43316 350 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 SEC11AP67812 179 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 OR5A1Q8NGJ0 315 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 ATP6V0E2Q8NHE4 81 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 TMEM101Q96IK0 257 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 TTTY13Q9BZ97 58 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 G3V4G9 280 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 UBE2D1P51668 147 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 TIRAPP58753 221 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 MAPKAPK5-AS1Q8N8E1 139 aa11.78□□□□□ -0.52
SSBP3-205ENST00000417664 TAL2Q16559 108 aa11.77□□□□□ -0.53
SSBP3-205ENST00000417664 FAM19A3Q7Z5A8 133 aa11.77□□□□□ -0.53
SSBP3-205ENST00000417664 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.53
SSBP3-205ENST00000417664 LEPROTO15243 131 aa11.76□□□□□ -0.53
SSBP3-205ENST00000417664 PLEKHB2Q96CS7 222 aa11.76□□□□□ -0.53
SSBP3-205ENST00000417664 CELA1Q9UNI1 258 aa11.76□□□□□ -0.53
SSBP3-205ENST00000417664 COL6A5A8TX70 2615 aa11.75□□□□□ -0.53
SSBP3-205ENST00000417664 A0A1B0GV90 55 aa11.75□□□□□ -0.53
SSBP3-205ENST00000417664 ZNF815PA8K554 130 aa11.75□□□□□ -0.53
SSBP3-205ENST00000417664 RNASE13Q5GAN3 156 aaKnown RBP11.75□□□□□ -0.53
SSBP3-205ENST00000417664 GEMIN7Q9H840 131 aaKnown RBP11.75□□□□□ -0.53
SSBP3-205ENST00000417664 NBEAL2Q6ZNJ1 2754 aa11.75□□□□□ -0.53
SSBP3-205ENST00000417664 TRAV26-1A0A087WT03 109 aa11.75□□□□□ -0.53
SSBP3-205ENST00000417664 J3QQQ9 107 aa11.75□□□□□ -0.53
SSBP3-205ENST00000417664 SH2D6Q7Z4S9 175 aa11.75□□□□□ -0.53
SSBP3-205ENST00000417664 ORAOV1Q8WV07 137 aa11.75□□□□□ -0.53
SSBP3-205ENST00000417664 C11orf68Q9H3H3 251 aaKnown RBP11.75□□□□□ -0.53
SSBP3-205ENST00000417664 IGLV5-45A0A087WSX0 123 aa11.74□□□□□ -0.53
SSBP3-205ENST00000417664 LGALS3P17931 250 aaKnown RBP11.74□□□□□ -0.53
SSBP3-205ENST00000417664 HERVK_113P63121 156 aa11.74□□□□□ -0.53
SSBP3-205ENST00000417664 H3BRM9 83 aa11.73□□□□□ -0.53
SSBP3-205ENST00000417664 VSIG2Q96IQ7 327 aa11.73□□□□□ -0.53
SSBP3-205ENST00000417664 A6NDN8 102 aa11.72□□□□□ -0.53
SSBP3-205ENST00000417664 CHCHD5Q9BSY4 110 aa11.72□□□□□ -0.53
SSBP3-205ENST00000417664 SCGB1D4Q6XE38 83 aa11.71□□□□□ -0.53
SSBP3-205ENST00000417664 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.53
SSBP3-205ENST00000417664 IGHV1-58A0A0C4DH39 117 aa11.71□□□□□ -0.54
SSBP3-205ENST00000417664 F5H768 121 aa11.71□□□□□ -0.54
SSBP3-205ENST00000417664 MRPL23Q16540 153 aaKnown RBP11.71□□□□□ -0.54
SSBP3-205ENST00000417664 LURAP1LQ8IV03 231 aa11.71□□□□□ -0.54
SSBP3-205ENST00000417664 TM2D2Q9BX73 214 aa11.71□□□□□ -0.54
SSBP3-205ENST00000417664 A0A1B0GUV1 79 aa11.7□□□□□ -0.54
SSBP3-205ENST00000417664 GAGE6Q13070 117 aa11.7□□□□□ -0.54
SSBP3-205ENST00000417664 LINC00242Q5T6M2 205 aa11.7□□□□□ -0.54
SSBP3-205ENST00000417664 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
SSBP3-205ENST00000417664 CEND1Q8N111 149 aa11.69□□□□□ -0.54
SSBP3-205ENST00000417664 IGHV3-30-3P0DP02 117 aa11.68□□□□□ -0.54
SSBP3-205ENST00000417664 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
SSBP3-205ENST00000417664 A0A0J9YY99 117 aa11.68□□□□□ -0.54
SSBP3-205ENST00000417664 H3BNG1 76 aa11.68□□□□□ -0.54
SSBP3-205ENST00000417664 C12orf74Q32Q52 190 aa11.68□□□□□ -0.54
SSBP3-205ENST00000417664 KPRPQ5T749 579 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-205ENST00000417664 RETNQ9HD89 108 aa11.68□□□□□ -0.54
SSBP3-205ENST00000417664 ICOSQ9Y6W8 199 aa11.68□□□□□ -0.54
SSBP3-205ENST00000417664 PKD1L1Q8TDX9 2849 aa11.67□□□□□ -0.54
SSBP3-205ENST00000417664 CMYA5Q8N3K9 4069 aa11.67□□□□□ -0.54
SSBP3-205ENST00000417664 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
SSBP3-205ENST00000417664 GCSHP23434 173 aa11.67□□□□□ -0.54
SSBP3-205ENST00000417664 CDKN2A-AS1Q9UH64 79 aa11.67□□□□□ -0.54
SSBP3-205ENST00000417664 SPANXB1Q9NS25 103 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-205ENST00000417664 COX11Q9Y6N1 276 aa11.66□□□□□ -0.54
SSBP3-205ENST00000417664 IGLV4-60A0A075B6I1 120 aa11.65□□□□□ -0.55
SSBP3-205ENST00000417664 TAX1BP3O14907 124 aa11.65□□□□□ -0.55
SSBP3-205ENST00000417664 HTN3P15516 51 aa11.65□□□□□ -0.55
SSBP3-205ENST00000417664 COX6A2Q02221 97 aa11.65□□□□□ -0.55
SSBP3-205ENST00000417664 IGHV3-64A0A075B6Q5 118 aa11.64□□□□□ -0.55
SSBP3-205ENST00000417664 TRAV8-3A0A0A6YYJ7 113 aa11.64□□□□□ -0.55
SSBP3-205ENST00000417664 CCL25O15444 150 aa11.64□□□□□ -0.55
SSBP3-205ENST00000417664 SPINK8P0C7L1 97 aa11.64□□□□□ -0.55
SSBP3-205ENST00000417664 PTTG1IPP53801 180 aa11.64□□□□□ -0.55
SSBP3-205ENST00000417664 SPATA25Q9BR10 227 aa11.64□□□□□ -0.55
SSBP3-205ENST00000417664 IGLV5-39A0A0G2JS06 123 aa11.63□□□□□ -0.55
SSBP3-205ENST00000417664 TMEM262E9PQX1 116 aa11.63□□□□□ -0.55
SSBP3-205ENST00000417664 FXYD2P54710 66 aa11.63□□□□□ -0.55
SSBP3-205ENST00000417664 SRSF9Q13242 221 aaKnown RBP eCLIP11.63□□□□□ -0.55
SSBP3-205ENST00000417664 ZFAND6Q6FIF0 208 aa11.63□□□□□ -0.55
SSBP3-205ENST00000417664 A0A096LPF7 62 aa11.62□□□□□ -0.55
SSBP3-205ENST00000417664 RBX1P62877 108 aa11.62□□□□□ -0.55
SSBP3-205ENST00000417664 LELP1Q5T871 98 aa11.62□□□□□ -0.55
SSBP3-205ENST00000417664 DNAH3Q8TD57 4116 aa11.62□□□□□ -0.55
SSBP3-205ENST00000417664 TMEM238LA0A1B0GVL6 79 aa11.62□□□□□ -0.55
SSBP3-205ENST00000417664 A6NJY4 79 aa11.62□□□□□ -0.55
SSBP3-205ENST00000417664 NDUFA12Q9UI09 145 aa11.62□□□□□ -0.55
SSBP3-205ENST00000417664 ANK2Q01484 3957 aa11.61□□□□□ -0.55
SSBP3-205ENST00000417664 K7EIL1 84 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms