RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CARD19Q96LW7 228 aa9.22□□□□□ -0.93
RPS28-201ENST00000417088 ST20Q9HBF5 79 aa9.22□□□□□ -0.93
RPS28-201ENST00000417088 CDC42SE2Q9NRR3 84 aa9.22□□□□□ -0.93
RPS28-201ENST00000417088 TMEM242Q9NWH2 141 aa9.22□□□□□ -0.93
RPS28-201ENST00000417088 POLR2KP53803 58 aaKnown RBP9.21□□□□□ -0.94
RPS28-201ENST00000417088 KRTAP10-8P60410 259 aa9.21□□□□□ -0.94
RPS28-201ENST00000417088 SS18Q15532 418 aa9.21□□□□□ -0.94
RPS28-201ENST00000417088 CT83Q5H943 113 aa9.21□□□□□ -0.94
RPS28-201ENST00000417088 SPINK6Q6UWN8 80 aa9.21□□□□□ -0.94
RPS28-201ENST00000417088 MRPL52Q86TS9 123 aaKnown RBP9.21□□□□□ -0.94
RPS28-201ENST00000417088 MRAP2Q96G30 205 aa9.21□□□□□ -0.94
RPS28-201ENST00000417088 PKIGQ9Y2B9 76 aa9.21□□□□□ -0.94
RPS28-201ENST00000417088 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
RPS28-201ENST00000417088 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.94
RPS28-201ENST00000417088 CD164L2Q6UWJ8 174 aa9.2□□□□□ -0.94
RPS28-201ENST00000417088 FAM210AQ96ND0 272 aa9.2□□□□□ -0.94
RPS28-201ENST00000417088 TRBV27A0A0K0K1C4 114 aa9.19□□□□□ -0.94
RPS28-201ENST00000417088 ZNF561-AS1K7EIQ3 104 aa9.19□□□□□ -0.94
RPS28-201ENST00000417088 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
RPS28-201ENST00000417088 BORCS7Q96B45 105 aa9.19□□□□□ -0.94
RPS28-201ENST00000417088 TMEM191AQ9H0A3 160 aa9.19□□□□□ -0.94
RPS28-201ENST00000417088 A0A1B0GUT8 65 aa9.18□□□□□ -0.94
RPS28-201ENST00000417088 RAB4AP20338 218 aa9.18□□□□□ -0.94
RPS28-201ENST00000417088 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
RPS28-201ENST00000417088 Q6ZRP5 223 aa9.18□□□□□ -0.94
RPS28-201ENST00000417088 C7orf77A4D0Y5 90 aa9.17□□□□□ -0.94
RPS28-201ENST00000417088 HIGD1CA8MV81 97 aa9.17□□□□□ -0.94
RPS28-201ENST00000417088 CAMPP49913 170 aa9.17□□□□□ -0.94
RPS28-201ENST00000417088 CEBPGP53567 150 aa9.17□□□□□ -0.94
RPS28-201ENST00000417088 PTTG1IPP53801 180 aa9.17□□□□□ -0.94
RPS28-201ENST00000417088 BLOC1S1P78537 153 aa9.17□□□□□ -0.94
RPS28-201ENST00000417088 AMN1Q8IY45 258 aa9.17□□□□□ -0.94
RPS28-201ENST00000417088 TSKUQ8WUA8 353 aa9.17□□□□□ -0.94
RPS28-201ENST00000417088 IGLV4-69A0A075B6H9 119 aa9.16□□□□□ -0.94
RPS28-201ENST00000417088 ALKAL2Q6UX46 152 aa9.16□□□□□ -0.94
RPS28-201ENST00000417088 LOC107984640A0A0U1RRK4 108 aa9.15□□□□□ -0.94
RPS28-201ENST00000417088 GAGE2BQ13066 116 aa9.15□□□□□ -0.94
RPS28-201ENST00000417088 LINC01551Q86U37 167 aa9.15□□□□□ -0.94
RPS28-201ENST00000417088 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 C1orf196B1AJZ1 125 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 SMKR1H3BMG3 65 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 COX7A2LO14548 114 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 VCYO14598 125 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 MALP21145 153 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 FCER1GP30273 86 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 NUP35Q8NFH5 326 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 ISOC2Q96AB3 205 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 SMIM7Q9BQ49 75 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 OSTCQ9NRP0 149 aa9.14□□□□□ -0.95
RPS28-201ENST00000417088 CSDC2Q9Y534 153 aaKnown RBP9.14□□□□□ -0.95
RPS28-201ENST00000417088 RNASE13Q5GAN3 156 aaKnown RBP9.13□□□□□ -0.95
RPS28-201ENST00000417088 NRACQ8N912 160 aa9.13□□□□□ -0.95
RPS28-201ENST00000417088 UBE2D4Q9Y2X8 147 aa9.13□□□□□ -0.95
RPS28-201ENST00000417088 CAMK2N2Q96S95 79 aa9.12□□□□□ -0.95
RPS28-201ENST00000417088 EIF5A2Q9GZV4 153 aaKnown RBP9.12□□□□□ -0.95
RPS28-201ENST00000417088 TRAV13-1A0A0B4J241 112 aa9.11□□□□□ -0.95
RPS28-201ENST00000417088 ZNF727A8MUV8 499 aa9.11□□□□□ -0.95
RPS28-201ENST00000417088 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.11□□□□□ -0.95
RPS28-201ENST00000417088 APOMO95445 188 aa9.11□□□□□ -0.95
RPS28-201ENST00000417088 SUMO2P61956 95 aaKnown RBP9.11□□□□□ -0.95
RPS28-201ENST00000417088 RIGQ13278 110 aa9.11□□□□□ -0.95
RPS28-201ENST00000417088 C9orf116Q5BN46 136 aaPredicted RBP9.11□□□□□ -0.95
RPS28-201ENST00000417088 C5orf38Q86SI9 138 aa9.11□□□□□ -0.95
RPS28-201ENST00000417088 C2orf48Q96LS8 159 aa9.11□□□□□ -0.95
RPS28-201ENST00000417088 V9GYV3 84 aa9.11□□□□□ -0.95
RPS28-201ENST00000417088 PPP1R17O96001 155 aa9.1□□□□□ -0.95
RPS28-201ENST00000417088 SMAGPQ0VAQ4 97 aa9.1□□□□□ -0.95
RPS28-201ENST00000417088 Q6ZUT4 128 aa9.1□□□□□ -0.95
RPS28-201ENST00000417088 KIR2DL4Q99706 377 aa9.1□□□□□ -0.95
RPS28-201ENST00000417088 PSORS1C2Q9UIG4 136 aa9.1□□□□□ -0.95
RPS28-201ENST00000417088 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.95
RPS28-201ENST00000417088 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
RPS28-201ENST00000417088 AKAP14Q86UN6 197 aa9.08□□□□□ -0.96
RPS28-201ENST00000417088 OPRPNQ99935 248 aaPredicted RBP9.08□□□□□ -0.96
RPS28-201ENST00000417088 PPP1R2P9O14990 202 aa9.07□□□□□ -0.96
RPS28-201ENST00000417088 MT-ND6P03923 174 aa9.07□□□□□ -0.96
RPS28-201ENST00000417088 RPL18AQ02543 176 aaKnown RBP9.07□□□□□ -0.96
RPS28-201ENST00000417088 SPAG11BQ08648 103 aa9.07□□□□□ -0.96
RPS28-201ENST00000417088 MRPL51Q4U2R6 128 aaKnown RBP9.07□□□□□ -0.96
RPS28-201ENST00000417088 FAM104BQ5XKR9 115 aa9.07□□□□□ -0.96
RPS28-201ENST00000417088 PHF5AQ7RTV0 110 aaKnown RBP9.07□□□□□ -0.96
RPS28-201ENST00000417088 TMEM18Q96B42 140 aa9.07□□□□□ -0.96
RPS28-201ENST00000417088 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
RPS28-201ENST00000417088 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
RPS28-201ENST00000417088 NAT8BQ9UHF3 227 aa9.06□□□□□ -0.96
RPS28-201ENST00000417088 TRBV24-1A0A075B6N3 115 aa9.05□□□□□ -0.96
RPS28-201ENST00000417088 TMEM241Q24JQ0 296 aa9.05□□□□□ -0.96
RPS28-201ENST00000417088 C1orf137Q5JT78 98 aa9.05□□□□□ -0.96
RPS28-201ENST00000417088 OR10D4PQ8NGN7 298 aa9.05□□□□□ -0.96
RPS28-201ENST00000417088 C20orf78Q9BR46 151 aa9.05□□□□□ -0.96
RPS28-201ENST00000417088 LINC00862A6NCI5 91 aa9.04□□□□□ -0.96
RPS28-201ENST00000417088 RPL23P62829 140 aaKnown RBP9.04□□□□□ -0.96
RPS28-201ENST00000417088 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
RPS28-201ENST00000417088 RPL32P62910 135 aaKnown RBP9.04□□□□□ -0.96
RPS28-201ENST00000417088 FAM74A3Q4VXF1 159 aa9.04□□□□□ -0.96
RPS28-201ENST00000417088 IGHV3OR16-9A0A0B4J2B5 98 aa9.03□□□□□ -0.96
RPS28-201ENST00000417088 SMIM27A0A1W2PRY6 76 aa9.03□□□□□ -0.96
RPS28-201ENST00000417088 CKS2P33552 79 aa9.03□□□□□ -0.96
RPS28-201ENST00000417088 ORAOV1Q8WV07 137 aa9.03□□□□□ -0.96
RPS28-201ENST00000417088 MRPL35Q9NZE8 188 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms