RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 RAB32Q13637 225 aa3.33□□□□□ -1.88
LMBR1-204ENST00000415428 C9orf62Q8N4C0 152 aa3.33□□□□□ -1.88
LMBR1-204ENST00000415428 PLA2G10O15496 165 aa3.32□□□□□ -1.88
LMBR1-204ENST00000415428 SIX6O95475 246 aa3.32□□□□□ -1.88
LMBR1-204ENST00000415428 SULT1A2P50226 295 aa3.32□□□□□ -1.88
LMBR1-204ENST00000415428 CT83Q5H943 113 aa3.32□□□□□ -1.88
LMBR1-204ENST00000415428 PYGO1Q9Y3Y4 419 aa3.32□□□□□ -1.88
LMBR1-204ENST00000415428 GAGE6Q13070 117 aa3.32□□□□□ -1.88
LMBR1-204ENST00000415428 CCDC32Q9BV29 185 aa3.32□□□□□ -1.88
LMBR1-204ENST00000415428 IGHV3-73A0A0B4J1V6 119 aa3.32□□□□□ -1.88
LMBR1-204ENST00000415428 ARL14EPLP0DKL9 152 aa3.32□□□□□ -1.88
LMBR1-204ENST00000415428 A0A087WZ39 114 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 CTXND1A0A1B0GTU2 59 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 UPK1BO75841 260 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 PET100P0DJ07 73 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 RPL12P30050 165 aaKnown RBP3.31□□□□□ -1.88
LMBR1-204ENST00000415428 CDC34P49427 236 aaPredicted RBP3.31□□□□□ -1.88
LMBR1-204ENST00000415428 GNG5P63218 68 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 ZNF726P1Q15940 193 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 OR2T35Q8NGX2 323 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 C6orf48Q9UBA6 75 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 UBE2D4Q9Y2X8 147 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 OR7C2O60412 319 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 TRGC1P0CF51 173 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 MCFD2Q8NI22 146 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 OR2D3Q8NGH3 330 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 OR10AG1Q8NH19 301 aa3.31□□□□□ -1.88
LMBR1-204ENST00000415428 CST7O76096 145 aa3.3□□□□□ -1.88
LMBR1-204ENST00000415428 SPRR1AP35321 89 aa3.3□□□□□ -1.88
LMBR1-204ENST00000415428 NHLH2Q02577 135 aa3.3□□□□□ -1.88
LMBR1-204ENST00000415428 COTL1Q14019 142 aa3.3□□□□□ -1.88
LMBR1-204ENST00000415428 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
LMBR1-204ENST00000415428 COX7A2LO14548 114 aa3.3□□□□□ -1.88
LMBR1-204ENST00000415428 EIF5AP63241 154 aaKnown RBP3.3□□□□□ -1.88
LMBR1-204ENST00000415428 EIF5AL1Q6IS14 154 aaKnown RBP3.3□□□□□ -1.88
LMBR1-204ENST00000415428 LINC01551Q86U37 167 aa3.3□□□□□ -1.88
LMBR1-204ENST00000415428 BIN3Q9NQY0 253 aa3.3□□□□□ -1.88
LMBR1-204ENST00000415428 C1orf196B1AJZ1 125 aa3.29□□□□□ -1.88
LMBR1-204ENST00000415428 I3L3M4 83 aa3.29□□□□□ -1.88
LMBR1-204ENST00000415428 ATP6V0CP27449 155 aa3.29□□□□□ -1.88
LMBR1-204ENST00000415428 FAM231DQ6ZW35 169 aa3.29□□□□□ -1.88
LMBR1-204ENST00000415428 MRAP2Q96G30 205 aa3.29□□□□□ -1.88
LMBR1-204ENST00000415428 TMEM262E9PQX1 116 aa3.29□□□□□ -1.88
LMBR1-204ENST00000415428 RAB24Q969Q5 203 aa3.29□□□□□ -1.88
LMBR1-204ENST00000415428 ACTR3CQ9C0K3 210 aaPredicted RBP3.29□□□□□ -1.88
LMBR1-204ENST00000415428 PPP1R17O96001 155 aa3.28□□□□□ -1.88
LMBR1-204ENST00000415428 NDUFA1O15239 70 aa3.28□□□□□ -1.88
LMBR1-204ENST00000415428 PRSS2P07478 247 aa3.28□□□□□ -1.88
LMBR1-204ENST00000415428 S100A4P26447 101 aaKnown RBP3.28□□□□□ -1.88
LMBR1-204ENST00000415428 SPANXA1Q9NS26 97 aa3.28□□□□□ -1.88
LMBR1-204ENST00000415428 M0QXV9 152 aa3.28□□□□□ -1.88
LMBR1-204ENST00000415428 SSBP3-AS1Q7Z2R9 100 aa3.28□□□□□ -1.88
LMBR1-204ENST00000415428 TRBV24-1A0A075B6N3 115 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 KRTAP4-16G5E9R7 235 aaPredicted RBP3.27□□□□□ -1.89
LMBR1-204ENST00000415428 SLC25A20O43772 301 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 Q8IZM0 81 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 STOML3Q8TAV4 291 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 IGLV5-45A0A087WSX0 123 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 CXCL5P42830 114 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 CD164Q04900 197 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 ZNF561-AS1K7EIQ3 104 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 MPC2O95563 127 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 APCSP02743 223 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 BCAP31P51572 246 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 MARVELD1Q9BSK0 173 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 CTDSP1Q9GZU7 261 aa3.27□□□□□ -1.89
LMBR1-204ENST00000415428 LINC01546A6NGU7 62 aa3.26□□□□□ -1.89
LMBR1-204ENST00000415428 MT2AP02795 61 aa3.26□□□□□ -1.89
LMBR1-204ENST00000415428 HIGD2BQ4VC39 106 aa3.26□□□□□ -1.89
LMBR1-204ENST00000415428 MCUBQ9NWR8 336 aa3.26□□□□□ -1.89
LMBR1-204ENST00000415428 CENPXA8MT69 81 aa3.26□□□□□ -1.89
LMBR1-204ENST00000415428 ZNF56Q15929 161 aa3.26□□□□□ -1.89
LMBR1-204ENST00000415428 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
LMBR1-204ENST00000415428 SUMO1P63165 101 aaKnown RBP3.25□□□□□ -1.89
LMBR1-204ENST00000415428 SPRR4Q96PI1 79 aa3.25□□□□□ -1.89
LMBR1-204ENST00000415428 C20orf78Q9BR46 151 aa3.25□□□□□ -1.89
LMBR1-204ENST00000415428 NUDT15Q9NV35 164 aa3.25□□□□□ -1.89
LMBR1-204ENST00000415428 ZNF706Q9Y5V0 76 aaPredicted RBP3.25□□□□□ -1.89
LMBR1-204ENST00000415428 IGKV2-24A0A0C4DH68 120 aa3.25□□□□□ -1.89
LMBR1-204ENST00000415428 K7EMI3 77 aa3.25□□□□□ -1.89
LMBR1-204ENST00000415428 UBE2L6O14933 153 aa3.25□□□□□ -1.89
LMBR1-204ENST00000415428 IL7P13232 177 aa3.25□□□□□ -1.89
LMBR1-204ENST00000415428 TMEM101Q96IK0 257 aa3.25□□□□□ -1.89
LMBR1-204ENST00000415428 PAIP2BQ9ULR5 123 aaKnown RBP3.25□□□□□ -1.89
LMBR1-204ENST00000415428 LSM5Q9Y4Y9 91 aaKnown RBP3.25□□□□□ -1.89
LMBR1-204ENST00000415428 C22orf24Q9Y442 160 aa3.25□□□□□ -1.89
LMBR1-204ENST00000415428 SPRR1BP22528 89 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 CEBPGP53567 150 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 RPL37P61927 97 aaKnown RBP3.24□□□□□ -1.89
LMBR1-204ENST00000415428 MRPL55Q7Z7F7 128 aaKnown RBP3.24□□□□□ -1.89
LMBR1-204ENST00000415428 SCGB1C1Q8TD33 95 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 CAMK2N2Q96S95 79 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 LOC107984156A0A0G2JMH3 177 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 A0A1W2PPV4 95 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 LYRM1O43325 122 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 H2BFSP57053 126 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 ARL17AQ8IVW1 177 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 NRACQ8N912 160 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 MPLKIPQ8TAP9 179 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 AMELXQ99217 191 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms