RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 TRAV8-4A0A0B4J246 113 aa13.29□□□□□ -0.28
LMBR1-203ENST00000414218 MRPL51Q4U2R6 128 aaKnown RBP13.29□□□□□ -0.28
LMBR1-203ENST00000414218 KRTAP29-1A8MX34 341 aaPredicted RBP13.28□□□□□ -0.28
LMBR1-203ENST00000414218 TRBV24-1A0A075B6N3 115 aa13.27□□□□□ -0.29
LMBR1-203ENST00000414218 RPL39LQ96EH5 51 aaKnown RBP13.27□□□□□ -0.29
LMBR1-203ENST00000414218 GNB1LQ9BYB4 327 aa13.27□□□□□ -0.29
LMBR1-203ENST00000414218 hDV102S1A0JD36 115 aa13.26□□□□□ -0.29
LMBR1-203ENST00000414218 PHOX2AO14813 284 aa13.26□□□□□ -0.29
LMBR1-203ENST00000414218 SDIM1Q6ZPB5 146 aa13.25□□□□□ -0.29
LMBR1-203ENST00000414218 TMEM136Q6ZRR5 245 aa13.25□□□□□ -0.29
LMBR1-203ENST00000414218 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.25□□□□□ -0.29
LMBR1-203ENST00000414218 PANO1I0J062 215 aa13.24□□□□□ -0.29
LMBR1-203ENST00000414218 CKS2P33552 79 aa13.24□□□□□ -0.29
LMBR1-203ENST00000414218 POLR2KP53803 58 aaKnown RBP13.24□□□□□ -0.29
LMBR1-203ENST00000414218 RPL32P62910 135 aaKnown RBP13.24□□□□□ -0.29
LMBR1-203ENST00000414218 NRACQ8N912 160 aa13.24□□□□□ -0.29
LMBR1-203ENST00000414218 C20orf78Q9BR46 151 aa13.24□□□□□ -0.29
LMBR1-203ENST00000414218 ST20Q9HBF5 79 aa13.24□□□□□ -0.29
LMBR1-203ENST00000414218 SMCO4Q9NRQ5 59 aa13.24□□□□□ -0.29
LMBR1-203ENST00000414218 LAMTOR2Q9Y2Q5 125 aa13.24□□□□□ -0.29
LMBR1-203ENST00000414218 MT-ND6P03923 174 aa13.23□□□□□ -0.29
LMBR1-203ENST00000414218 YPEL4Q96NS1 127 aa13.23□□□□□ -0.29
LMBR1-203ENST00000414218 IGKV3OR2-268A0A0C4DH90 116 aa13.22□□□□□ -0.29
LMBR1-203ENST00000414218 TRBV27A0A0K0K1C4 114 aa13.22□□□□□ -0.29
LMBR1-203ENST00000414218 SDHAF1A6NFY7 115 aa13.22□□□□□ -0.29
LMBR1-203ENST00000414218 GAS8-AS1O95177 125 aa13.22□□□□□ -0.29
LMBR1-203ENST00000414218 NCR2O95944 276 aa13.22□□□□□ -0.29
LMBR1-203ENST00000414218 RPS10P46783 165 aaKnown RBP13.22□□□□□ -0.29
LMBR1-203ENST00000414218 RPL37AP61513 92 aaKnown RBP13.22□□□□□ -0.29
LMBR1-203ENST00000414218 CNBPP62633 177 aaKnown RBP13.22□□□□□ -0.29
LMBR1-203ENST00000414218 ORMDL3Q8N138 153 aa13.22□□□□□ -0.29
LMBR1-203ENST00000414218 GAGE12HA6NDE8 117 aa13.21□□□□□ -0.29
LMBR1-203ENST00000414218 PRSS47A8MTI9 375 aa13.21□□□□□ -0.29
LMBR1-203ENST00000414218 SLPIP03973 132 aa13.21□□□□□ -0.29
LMBR1-203ENST00000414218 AMMECR1LQ6DCA0 310 aa13.21□□□□□ -0.29
LMBR1-203ENST00000414218 AP5S1Q9NUS5 200 aa13.21□□□□□ -0.29
LMBR1-203ENST00000414218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.2□□□□□ -0.3
LMBR1-203ENST00000414218 IGKV2-29A2NJV5 120 aaPredicted RBP13.2□□□□□ -0.3
LMBR1-203ENST00000414218 D6R8Y8 96 aa13.2□□□□□ -0.3
LMBR1-203ENST00000414218 I3L3M4 83 aa13.2□□□□□ -0.3
LMBR1-203ENST00000414218 VCYO14598 125 aa13.2□□□□□ -0.3
LMBR1-203ENST00000414218 SUMO2P61956 95 aaKnown RBP13.2□□□□□ -0.3
LMBR1-203ENST00000414218 SMKR1H3BMG3 65 aa13.19□□□□□ -0.3
LMBR1-203ENST00000414218 TNFRSF6BO95407 300 aa13.19□□□□□ -0.3
LMBR1-203ENST00000414218 APCSP02743 223 aa13.19□□□□□ -0.3
LMBR1-203ENST00000414218 RNASEKQ6P5S7 137 aaKnown RBP13.19□□□□□ -0.3
LMBR1-203ENST00000414218 IGHV3-64A0A075B6Q5 118 aa13.18□□□□□ -0.3
LMBR1-203ENST00000414218 TGIF2-C20orf24A0A0A6YYL0 155 aa13.18□□□□□ -0.3
LMBR1-203ENST00000414218 TCAPO15273 167 aa13.18□□□□□ -0.3
LMBR1-203ENST00000414218 PMCHP20382 165 aa13.18□□□□□ -0.3
LMBR1-203ENST00000414218 PRELID3AQ96N28 172 aa13.18□□□□□ -0.3
LMBR1-203ENST00000414218 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.17□□□□□ -0.3
LMBR1-203ENST00000414218 H7C423 109 aa13.17□□□□□ -0.3
LMBR1-203ENST00000414218 FGF6P10767 208 aa13.17□□□□□ -0.3
LMBR1-203ENST00000414218 C15orf56Q8N910 161 aa13.17□□□□□ -0.3
LMBR1-203ENST00000414218 S100A1P23297 94 aa13.16□□□□□ -0.3
LMBR1-203ENST00000414218 CIRBPQ14011 172 aaKnown RBP13.16□□□□□ -0.3
LMBR1-203ENST00000414218 CFAP161Q6P656 301 aa13.16□□□□□ -0.3
LMBR1-203ENST00000414218 DPH3Q96FX2 82 aa13.16□□□□□ -0.3
LMBR1-203ENST00000414218 OXTP01178 125 aa13.15□□□□□ -0.3
LMBR1-203ENST00000414218 NPYP01303 97 aa13.15□□□□□ -0.3
LMBR1-203ENST00000414218 CHCHD10Q8WYQ3 142 aaPredicted RBP13.15□□□□□ -0.3
LMBR1-203ENST00000414218 CHTF8P0CG12 524 aa13.14□□□□□ -0.31
LMBR1-203ENST00000414218 HNRNPA3P51991 378 aaKnown RBP13.14□□□□□ -0.31
LMBR1-203ENST00000414218 HIGD2BQ4VC39 106 aa13.14□□□□□ -0.31
LMBR1-203ENST00000414218 CBLN2Q8IUK8 224 aa13.14□□□□□ -0.31
LMBR1-203ENST00000414218 KIR2DL4Q99706 377 aa13.14□□□□□ -0.31
LMBR1-203ENST00000414218 TSHBP01222 138 aa13.13□□□□□ -0.31
LMBR1-203ENST00000414218 SMIM2Q9BVW6 85 aa13.13□□□□□ -0.31
LMBR1-203ENST00000414218 MRPL18Q9H0U6 180 aaKnown RBP13.13□□□□□ -0.31
LMBR1-203ENST00000414218 ESDP10768 282 aa13.12□□□□□ -0.31
LMBR1-203ENST00000414218 LRP1Q07954 4544 aaKnown RBP13.12□□□□□ -0.31
LMBR1-203ENST00000414218 A0A087WYN8 130 aa13.11□□□□□ -0.31
LMBR1-203ENST00000414218 K7EMI3 77 aa13.11□□□□□ -0.31
LMBR1-203ENST00000414218 ZNF25P17030 456 aaPredicted RBP13.11□□□□□ -0.31
LMBR1-203ENST00000414218 FABP9Q0Z7S8 132 aa13.11□□□□□ -0.31
LMBR1-203ENST00000414218 OR5A1Q8NGJ0 315 aa13.11□□□□□ -0.31
LMBR1-203ENST00000414218 TMEM101Q96IK0 257 aa13.11□□□□□ -0.31
LMBR1-203ENST00000414218 ALKBH7Q9BT30 221 aaPredicted RBP13.11□□□□□ -0.31
LMBR1-203ENST00000414218 MAP1LC3AQ9H492 121 aa13.11□□□□□ -0.31
LMBR1-203ENST00000414218 TRAPPC1Q9Y5R8 145 aa13.11□□□□□ -0.31
LMBR1-203ENST00000414218 FOXI1Q12951 378 aa13.1□□□□□ -0.31
LMBR1-203ENST00000414218 SPACA4Q8TDM5 124 aa13.1□□□□□ -0.31
LMBR1-203ENST00000414218 PKHD1L1Q86WI1 4243 aa13.1□□□□□ -0.31
LMBR1-203ENST00000414218 KIAA1644Q3SXP7 199 aa13.09□□□□□ -0.31
LMBR1-203ENST00000414218 NXT2Q9NPJ8 142 aaKnown RBP13.09□□□□□ -0.31
LMBR1-203ENST00000414218 COLCA2A8K830 154 aa13.08□□□□□ -0.32
LMBR1-203ENST00000414218 XCL1P47992 114 aa13.08□□□□□ -0.32
LMBR1-203ENST00000414218 COX6A2Q02221 97 aa13.08□□□□□ -0.32
LMBR1-203ENST00000414218 Q8N8P6 123 aa13.08□□□□□ -0.32
LMBR1-203ENST00000414218 GVQW2A0A096LPI5 108 aaPredicted RBP13.07□□□□□ -0.32
LMBR1-203ENST00000414218 LINC00959A0A1B0GUT2 108 aa13.07□□□□□ -0.32
LMBR1-203ENST00000414218 FCER1GP30273 86 aa13.07□□□□□ -0.32
LMBR1-203ENST00000414218 CCL25O15444 150 aa13.06□□□□□ -0.32
LMBR1-203ENST00000414218 ATP6V1G1O75348 118 aa13.06□□□□□ -0.32
LMBR1-203ENST00000414218 SMAGPQ0VAQ4 97 aa13.06□□□□□ -0.32
LMBR1-203ENST00000414218 MRPL52Q86TS9 123 aaKnown RBP13.06□□□□□ -0.32
LMBR1-203ENST00000414218 PRSS3P2Q8NHM4 247 aa13.06□□□□□ -0.32
LMBR1-203ENST00000414218 PLAC8Q9NZF1 115 aa13.06□□□□□ -0.32
LMBR1-203ENST00000414218 RAB5AP20339 215 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms