RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 MYO9AB2RTY4 2548 aa9.57□□□□□ -0.88
LITAF-203ENST00000413364 TRAV13-1A0A0B4J241 112 aa9.57□□□□□ -0.88
LITAF-203ENST00000413364 PYGO1Q9Y3Y4 419 aa9.57□□□□□ -0.88
LITAF-203ENST00000413364 SONP18583 2426 aaKnown RBP9.56□□□□□ -0.88
LITAF-203ENST00000413364 TRAV12-2A0A075B6T6 113 aa9.56□□□□□ -0.88
LITAF-203ENST00000413364 TRBV30A0A0K0K1B3 111 aa9.56□□□□□ -0.88
LITAF-203ENST00000413364 hADV29S1A0JD25 119 aa9.56□□□□□ -0.88
LITAF-203ENST00000413364 SPINK13Q1W4C9 94 aa9.56□□□□□ -0.88
LITAF-203ENST00000413364 SLC25A29Q8N8R3 303 aa9.56□□□□□ -0.88
LITAF-203ENST00000413364 C5orf38Q86SI9 138 aa9.56□□□□□ -0.88
LITAF-203ENST00000413364 TMEM61Q8N0U2 210 aa9.56□□□□□ -0.88
LITAF-203ENST00000413364 GCN1Q92616 2671 aaKnown RBP9.56□□□□□ -0.88
LITAF-203ENST00000413364 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.55□□□□□ -0.88
LITAF-203ENST00000413364 IGHV3-16A0A0C4DH30 117 aa9.55□□□□□ -0.88
LITAF-203ENST00000413364 MGPP08493 103 aa9.55□□□□□ -0.88
LITAF-203ENST00000413364 DEFB131AP59861 70 aa9.55□□□□□ -0.88
LITAF-203ENST00000413364 DYNLRB2Q8TF09 96 aa9.55□□□□□ -0.88
LITAF-203ENST00000413364 SMIM2Q9BVW6 85 aa9.55□□□□□ -0.88
LITAF-203ENST00000413364 KNCNA6PVL3 124 aa9.54□□□□□ -0.88
LITAF-203ENST00000413364 A8MTW9 85 aa9.54□□□□□ -0.88
LITAF-203ENST00000413364 RNASE1P07998 156 aaKnown RBP9.54□□□□□ -0.88
LITAF-203ENST00000413364 HIST2H2BDQ6DRA6 164 aa9.54□□□□□ -0.88
LITAF-203ENST00000413364 C9orf85Q96MD7 179 aa9.54□□□□□ -0.88
LITAF-203ENST00000413364 KIF25-AS1Q9Y6Z4 181 aa9.54□□□□□ -0.88
LITAF-203ENST00000413364 IGHV1OR15-1A0A075B7D0 117 aa9.54□□□□□ -0.88
LITAF-203ENST00000413364 DEFB114Q30KQ6 69 aa9.54□□□□□ -0.88
LITAF-203ENST00000413364 PAPPA-AS1Q5QFB9 102 aa9.54□□□□□ -0.88
LITAF-203ENST00000413364 TMEM263Q8WUH6 116 aaKnown RBP9.54□□□□□ -0.88
LITAF-203ENST00000413364 NBPF19A0A087WUL8 3843 aa9.53□□□□□ -0.88
LITAF-203ENST00000413364 LINC00315P59091 139 aa9.53□□□□□ -0.88
LITAF-203ENST00000413364 SUMO2P61956 95 aaKnown RBP9.53□□□□□ -0.88
LITAF-203ENST00000413364 HIST1H4AP62805 103 aaKnown RBP9.53□□□□□ -0.88
LITAF-203ENST00000413364 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
LITAF-203ENST00000413364 C16orf95Q9H693 158 aa9.53□□□□□ -0.88
LITAF-203ENST00000413364 PPP1R17O96001 155 aa9.53□□□□□ -0.88
LITAF-203ENST00000413364 OXTP01178 125 aa9.53□□□□□ -0.88
LITAF-203ENST00000413364 CD28P10747 220 aa9.53□□□□□ -0.88
LITAF-203ENST00000413364 RPL35AP18077 110 aaKnown RBP9.53□□□□□ -0.88
LITAF-203ENST00000413364 Q1RN00 199 aa9.53□□□□□ -0.88
LITAF-203ENST00000413364 ZNF469Q96JG9 3925 aaPredicted RBP9.53□□□□□ -0.88
LITAF-203ENST00000413364 MUC4Q99102 2169 aa9.52□□□□□ -0.88
LITAF-203ENST00000413364 UNC79Q9P2D8 2635 aa9.52□□□□□ -0.89
LITAF-203ENST00000413364 H7C423 109 aa9.52□□□□□ -0.89
LITAF-203ENST00000413364 ZNF22P17026 224 aaPredicted RBP9.52□□□□□ -0.89
LITAF-203ENST00000413364 RPL39LQ96EH5 51 aaKnown RBP9.52□□□□□ -0.89
LITAF-203ENST00000413364 COX6CP09669 75 aa9.52□□□□□ -0.89
LITAF-203ENST00000413364 PFN2P35080 140 aa9.52□□□□□ -0.89
LITAF-203ENST00000413364 DSCR8Q96T75 97 aa9.52□□□□□ -0.89
LITAF-203ENST00000413364 FASNP49327 2511 aaKnown RBP9.51□□□□□ -0.89
LITAF-203ENST00000413364 A0A1W2PRX2 142 aa9.51□□□□□ -0.89
LITAF-203ENST00000413364 CCL24O00175 119 aa9.51□□□□□ -0.89
LITAF-203ENST00000413364 C11orf44Q8N8P7 122 aa9.51□□□□□ -0.89
LITAF-203ENST00000413364 LINC01006Q8NI28 216 aa9.51□□□□□ -0.89
LITAF-203ENST00000413364 ORMDL2Q53FV1 153 aa9.51□□□□□ -0.89
LITAF-203ENST00000413364 SDIM1Q6ZPB5 146 aa9.51□□□□□ -0.89
LITAF-203ENST00000413364 SCGB3A1Q96QR1 104 aa9.51□□□□□ -0.89
LITAF-203ENST00000413364 MAP6D1Q9H9H5 199 aa9.51□□□□□ -0.89
LITAF-203ENST00000413364 ITPR2Q14571 2701 aa9.5□□□□□ -0.89
LITAF-203ENST00000413364 RBMY1BA6NDE4 496 aaKnown RBP9.5□□□□□ -0.89
LITAF-203ENST00000413364 RBMY1EA6NEQ0 496 aaKnown RBP9.5□□□□□ -0.89
LITAF-203ENST00000413364 J3QQQ9 107 aa9.5□□□□□ -0.89
LITAF-203ENST00000413364 RBMY1DP0C7P1 496 aaKnown RBP9.5□□□□□ -0.89
LITAF-203ENST00000413364 A0A087WWL8 130 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 RBMY1A1P0DJD3 496 aaKnown RBP9.49□□□□□ -0.89
LITAF-203ENST00000413364 RBMY1CP0DJD4 496 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 RBMY1FQ15415 496 aaKnown RBP9.49□□□□□ -0.89
LITAF-203ENST00000413364 LINC00336Q6ZUF6 198 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 SORL1Q92673 2214 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 HILS1P60008 231 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 SUMO4Q6EEV6 95 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 SERP2Q8N6R1 65 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 TOMM6Q96B49 74 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 ACANP16112 2415 aa9.49□□□□□ -0.89
LITAF-203ENST00000413364 PKIGQ9Y2B9 76 aa9.48□□□□□ -0.89
LITAF-203ENST00000413364 F5H697 171 aa9.47□□□□□ -0.89
LITAF-203ENST00000413364 H7C2G1 150 aa9.47□□□□□ -0.89
LITAF-203ENST00000413364 RPL18AQ02543 176 aaKnown RBP9.47□□□□□ -0.89
LITAF-203ENST00000413364 PRIMA1Q86XR5 153 aa9.47□□□□□ -0.89
LITAF-203ENST00000413364 TRIAP1O43715 76 aa9.46□□□□□ -0.9
LITAF-203ENST00000413364 UPK3BQ9BT76 320 aa9.46□□□□□ -0.9
LITAF-203ENST00000413364 ZNF876PQ49A33 203 aa9.45□□□□□ -0.9
LITAF-203ENST00000413364 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
LITAF-203ENST00000413364 TRBV6-5A0A0K0K1A5 114 aa9.45□□□□□ -0.9
LITAF-203ENST00000413364 POLR2KP53803 58 aaKnown RBP9.45□□□□□ -0.9
LITAF-203ENST00000413364 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
LITAF-203ENST00000413364 C1orf195Q5TG92 126 aa9.45□□□□□ -0.9
LITAF-203ENST00000413364 SMR3AQ99954 134 aa9.45□□□□□ -0.9
LITAF-203ENST00000413364 TMEM223A0PJW6 202 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 LINC00467Q9BRT7 94 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 CYSTM1Q9H1C7 97 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 M0QY20 66 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 LST1O00453 97 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 VCYO14598 125 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 NDUFC2O95298 119 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 NPC2P61916 151 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 C2orf66Q6UXQ4 117 aa9.44□□□□□ -0.9
LITAF-203ENST00000413364 HTN1P15515 57 aa9.43□□□□□ -0.9
LITAF-203ENST00000413364 ICOSQ9Y6W8 199 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 250.2 ms