RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 CCL25O15444 150 aa7.4□□□□□ -1.22
LINC00963-201ENST00000412141 ESDP10768 282 aa7.4□□□□□ -1.22
LINC00963-201ENST00000412141 FCER1GP30273 86 aa7.4□□□□□ -1.22
LINC00963-201ENST00000412141 HNRNPA3P51991 378 aaKnown RBP7.4□□□□□ -1.22
LINC00963-201ENST00000412141 POLR2KP53803 58 aaKnown RBP7.4□□□□□ -1.22
LINC00963-201ENST00000412141 COX6A2Q02221 97 aa7.4□□□□□ -1.22
LINC00963-201ENST00000412141 A0A087WYN8 130 aa7.39□□□□□ -1.23
LINC00963-201ENST00000412141 IGKV2-24A0A0C4DH68 120 aa7.39□□□□□ -1.23
LINC00963-201ENST00000412141 NDUFS6O75380 124 aaKnown RBP7.39□□□□□ -1.23
LINC00963-201ENST00000412141 ZNF25P17030 456 aaPredicted RBP7.39□□□□□ -1.23
LINC00963-201ENST00000412141 FOXI1Q12951 378 aa7.39□□□□□ -1.23
LINC00963-201ENST00000412141 PEA15Q15121 130 aa7.39□□□□□ -1.23
LINC00963-201ENST00000412141 FAM74A3Q4VXF1 159 aa7.39□□□□□ -1.23
LINC00963-201ENST00000412141 RNASE13Q5GAN3 156 aaKnown RBP7.39□□□□□ -1.23
LINC00963-201ENST00000412141 PRSS3P2Q8NHM4 247 aa7.39□□□□□ -1.23
LINC00963-201ENST00000412141 NAT8Q9UHE5 227 aa7.39□□□□□ -1.23
LINC00963-201ENST00000412141 NAT8BQ9UHF3 227 aa7.39□□□□□ -1.23
LINC00963-201ENST00000412141 LINC00959A0A1B0GUT2 108 aa7.38□□□□□ -1.23
LINC00963-201ENST00000412141 C7orf77A4D0Y5 90 aa7.38□□□□□ -1.23
LINC00963-201ENST00000412141 VCYO14598 125 aa7.38□□□□□ -1.23
LINC00963-201ENST00000412141 SS18Q15532 418 aa7.38□□□□□ -1.23
LINC00963-201ENST00000412141 MRPL51Q4U2R6 128 aaKnown RBP7.38□□□□□ -1.23
LINC00963-201ENST00000412141 NRACQ8N912 160 aa7.38□□□□□ -1.23
LINC00963-201ENST00000412141 PKHD1L1Q86WI1 4243 aa7.37□□□□□ -1.23
LINC00963-201ENST00000412141 TRBV27A0A0K0K1C4 114 aa7.37□□□□□ -1.23
LINC00963-201ENST00000412141 SUMO2P61956 95 aaKnown RBP7.37□□□□□ -1.23
LINC00963-201ENST00000412141 MAJINQ3KP22 176 aa7.37□□□□□ -1.23
LINC00963-201ENST00000412141 MRPL54Q6P161 138 aaKnown RBP7.37□□□□□ -1.23
LINC00963-201ENST00000412141 ZNF664Q8N3J9 261 aa7.37□□□□□ -1.23
LINC00963-201ENST00000412141 SPACA4Q8TDM5 124 aa7.37□□□□□ -1.23
LINC00963-201ENST00000412141 CDC42SE2Q9NRR3 84 aa7.37□□□□□ -1.23
LINC00963-201ENST00000412141 GVQW2A0A096LPI5 108 aaPredicted RBP7.36□□□□□ -1.23
LINC00963-201ENST00000412141 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
LINC00963-201ENST00000412141 CKS2P33552 79 aa7.36□□□□□ -1.23
LINC00963-201ENST00000412141 FAM104BQ5XKR9 115 aa7.36□□□□□ -1.23
LINC00963-201ENST00000412141 KIR2DL4Q99706 377 aa7.36□□□□□ -1.23
LINC00963-201ENST00000412141 TRAV13-1A0A0B4J241 112 aa7.35□□□□□ -1.23
LINC00963-201ENST00000412141 CIRBPQ14011 172 aaKnown RBP7.35□□□□□ -1.23
LINC00963-201ENST00000412141 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
LINC00963-201ENST00000412141 IGHV1-58A0A0C4DH39 117 aa7.34□□□□□ -1.23
LINC00963-201ENST00000412141 PPP1R17O96001 155 aa7.34□□□□□ -1.23
LINC00963-201ENST00000412141 OXTP01178 125 aa7.34□□□□□ -1.23
LINC00963-201ENST00000412141 MALP21145 153 aa7.34□□□□□ -1.23
LINC00963-201ENST00000412141 CD164L2Q6UWJ8 174 aa7.34□□□□□ -1.23
LINC00963-201ENST00000412141 STPG4Q8N801 248 aa7.34□□□□□ -1.23
LINC00963-201ENST00000412141 A0A096LNI7 61 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 D6R8Y8 96 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 ZNF561-AS1K7EIQ3 104 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 PHOX2AO14813 284 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 TNFRSF6BO95407 300 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 RPL39P62891 51 aaKnown RBP7.33□□□□□ -1.24
LINC00963-201ENST00000412141 Q6ZUT4 128 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 C5orf38Q86SI9 138 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 CARD19Q96LW7 228 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 PLAC8Q9NZF1 115 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 UBE2D4Q9Y2X8 147 aa7.33□□□□□ -1.24
LINC00963-201ENST00000412141 C1orf196B1AJZ1 125 aa7.32□□□□□ -1.24
LINC00963-201ENST00000412141 PPP1R2P9O14990 202 aa7.32□□□□□ -1.24
LINC00963-201ENST00000412141 HBBP68871 147 aa7.32□□□□□ -1.24
LINC00963-201ENST00000412141 C7orf33Q8WU49 177 aa7.32□□□□□ -1.24
LINC00963-201ENST00000412141 OPRPNQ99935 248 aaPredicted RBP7.32□□□□□ -1.24
LINC00963-201ENST00000412141 A0A1B0GW15 77 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 LINC00862A6NCI5 91 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 F8W036 122 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 COX7A2LO14548 114 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 TCAPO15273 167 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 NPYP01303 97 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 SYCNQ0VAF6 134 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 SMAGPQ0VAQ4 97 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 C20orf78Q9BR46 151 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 SMDT1Q9H4I9 107 aa7.31□□□□□ -1.24
LINC00963-201ENST00000412141 IGLV4-69A0A075B6H9 119 aa7.3□□□□□ -1.24
LINC00963-201ENST00000412141 GAGE2BQ13066 116 aa7.3□□□□□ -1.24
LINC00963-201ENST00000412141 TMEM18Q96B42 140 aa7.3□□□□□ -1.24
LINC00963-201ENST00000412141 SMIM2Q9BVW6 85 aa7.3□□□□□ -1.24
LINC00963-201ENST00000412141 TRBV24-1A0A075B6N3 115 aa7.29□□□□□ -1.24
LINC00963-201ENST00000412141 A0A1B0GXF2 115 aa7.29□□□□□ -1.24
LINC00963-201ENST00000412141 S100A8P05109 93 aa7.29□□□□□ -1.24
LINC00963-201ENST00000412141 Q6ZRU5 148 aa7.29□□□□□ -1.24
LINC00963-201ENST00000412141 CSDC2Q9Y534 153 aaKnown RBP7.29□□□□□ -1.24
LINC00963-201ENST00000412141 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
LINC00963-201ENST00000412141 LOC389332A0A1B0GUA5 103 aa7.28□□□□□ -1.24
LINC00963-201ENST00000412141 SERTAD4-AS1Q5TG53 156 aa7.28□□□□□ -1.24
LINC00963-201ENST00000412141 TMEM136Q6ZRR5 245 aa7.28□□□□□ -1.24
LINC00963-201ENST00000412141 CAMK2N2Q96S95 79 aa7.28□□□□□ -1.24
LINC00963-201ENST00000412141 RAB5AP20339 215 aa7.27□□□□□ -1.25
LINC00963-201ENST00000412141 RAB14P61106 215 aa7.27□□□□□ -1.25
LINC00963-201ENST00000412141 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
LINC00963-201ENST00000412141 ORMDL3Q8N138 153 aa7.27□□□□□ -1.25
LINC00963-201ENST00000412141 PRELID3AQ96N28 172 aa7.27□□□□□ -1.25
LINC00963-201ENST00000412141 TIMM21Q9BVV7 248 aa7.27□□□□□ -1.25
LINC00963-201ENST00000412141 IFITM10A6NMD0 228 aa7.26□□□□□ -1.25
LINC00963-201ENST00000412141 SPAG11BQ08648 103 aa7.26□□□□□ -1.25
LINC00963-201ENST00000412141 FAM104AQ969W3 186 aa7.26□□□□□ -1.25
LINC00963-201ENST00000412141 LINC00474Q9P2X8 69 aa7.26□□□□□ -1.25
LINC00963-201ENST00000412141 LOC107984640A0A0U1RRK4 108 aa7.25□□□□□ -1.25
LINC00963-201ENST00000412141 APOMO95445 188 aa7.25□□□□□ -1.25
LINC00963-201ENST00000412141 PPBPP02775 128 aa7.25□□□□□ -1.25
LINC00963-201ENST00000412141 PTTG1IPP53801 180 aa7.25□□□□□ -1.25
LINC00963-201ENST00000412141 PRR3P79522 188 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms