RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 HIST1H2BMQ99879 126 aa3.83□□□□□ -1.8
LINC00396-201ENST00000411690 PARLQ9H300 379 aa3.83□□□□□ -1.8
LINC00396-201ENST00000411690 IGLV10-54A0A075B6I4 117 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 IGLV1-50A0A075B6I6 118 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 A0A087WWL8 130 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 A8MWV9 139 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 CXCL1P09341 107 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 GCHFRP30047 84 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 NDUFA6P56556 154 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 UBE2G1P62253 170 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 HIST3H2BBQ8N257 126 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 RAB24Q969Q5 203 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 PTH2Q96A98 100 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 SMIM7Q9BQ49 75 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 LINC00474Q9P2X8 69 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 PSG8Q9UQ74 426 aa3.82□□□□□ -1.8
LINC00396-201ENST00000411690 A0A096LNI7 61 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 LINC00587B1AMM8 73 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 TRGC2P03986 189 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 TCRAP04437 139 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 UBE2G2P60604 165 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 COX19Q49B96 90 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 LINC00269Q8N2A0 174 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 FER1L6-AS1Q8NA97 138 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 PACRGQ96M98 296 aaPredicted RBP3.81□□□□□ -1.8
LINC00396-201ENST00000411690 C9orf85Q96MD7 179 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 PRR34Q9NV39 138 aa3.81□□□□□ -1.8
LINC00396-201ENST00000411690 TRBV6-8A0A0A6YYG3 113 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 TGIF2-C20orf24A0A0A6YYL0 155 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 A0A1B0GV50 99 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 IFITM10A6NMD0 228 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 FABP5P3A8MUU1 101 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 TSTD3H0UI37 97 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 RHODO00212 210 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 TSPAN13O95857 204 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 TRGC1P0CF51 173 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 STAG3L2P0CL84 134 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 STAG3L3P0CL85 134 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 UBE2D1P51668 147 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 PKIAP61925 76 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 RPL23P62829 140 aaKnown RBP3.8□□□□□ -1.8
LINC00396-201ENST00000411690 JOSD1Q15040 202 aaPredicted RBP3.8□□□□□ -1.8
LINC00396-201ENST00000411690 PYY3Q5JQD4 70 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 FAM74A4Q5TZK3 123 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 MRPL52Q86TS9 123 aaKnown RBP3.8□□□□□ -1.8
LINC00396-201ENST00000411690 DIRC1Q969H9 104 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 EPDR1Q9UM22 224 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 PHLDA3Q9Y5J5 127 aa3.8□□□□□ -1.8
LINC00396-201ENST00000411690 TRAV34A0A0B4J273 112 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 A0A1W2PRE2 83 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 H3BVH4 76 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 PEX7O00628 323 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 MT-ND6P03923 174 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 GZMBP10144 247 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 RNASE3P12724 160 aaKnown RBP3.79□□□□□ -1.8
LINC00396-201ENST00000411690 CEBPGP53567 150 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 SSTP61278 116 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 RPL36AP83881 106 aaKnown RBP3.79□□□□□ -1.8
LINC00396-201ENST00000411690 ADIRFQ15847 76 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 C1orf137Q5JT78 98 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 CST9LP1Q5W188 147 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 OR10D4PQ8NGN7 298 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 RPL36ALQ969Q0 106 aaKnown RBP3.79□□□□□ -1.8
LINC00396-201ENST00000411690 C11orf52Q96A22 123 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 TMEM18Q96B42 140 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 JPT2Q9H910 190 aa3.79□□□□□ -1.8
LINC00396-201ENST00000411690 TRBV7-3A0A075B6L6 115 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 TMSB15BA0A087X1C1 80 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 TRAV8-4A0A0B4J246 113 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 M0R381 172 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 PAGE4O60829 102 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 P01737 135 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 SMIM17P0DL12 118 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 CRYGAP11844 174 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 RPL13AP40429 203 aaKnown RBP3.78□□□□□ -1.8
LINC00396-201ENST00000411690 RAB4BP61018 213 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 UBE2D3P61077 147 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 UBE2D2P62837 147 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 RBX1P62877 108 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 REG3AQ06141 175 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 FAM162BQ5T6X4 162 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 UFSP1Q6NVU6 142 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 Q86TA4 180 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 LINC01551Q86U37 167 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 FMC1Q96HJ9 113 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 GFRA4Q9GZZ7 299 aa3.78□□□□□ -1.8
LINC00396-201ENST00000411690 TRBV10-1A0A0K0K1A3 114 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 XKRY2A2RUG3 117 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 GRIFINA4D1Z8 144 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 F5H697 171 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 H0Y9J4 135 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 ESDP10768 282 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 FABP4P15090 132 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 ZNF80P51504 273 aaPredicted RBP3.77□□□□□ -1.81
LINC00396-201ENST00000411690 ZNF56Q15929 161 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 IQCJQ1A5X6 159 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 PIK3CD-AS1Q5SR53 167 aa3.77□□□□□ -1.81
LINC00396-201ENST00000411690 CFAP161Q6P656 301 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms