RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 FREM2Q5SZK8 3169 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 TRAV4A0A0B4J268 109 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 A0A0J9YXV3 536 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 TEX49A0A1B0GTD5 131 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 H3BUX3 64 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 J3QLI3 93 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 COX7A2LO14548 114 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 IGHV3-53P01767 116 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 CXCL5P42830 114 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 EMP1P54849 157 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 HERV-K104P63124 156 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 HIST2H2BCQ6DN03 193 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 SFTA2Q6UW10 78 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 LINC00643Q86TS7 51 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 C15orf53Q8NAA6 179 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 C10orf105Q8TEF2 133 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 FAM110AQ9BQ89 295 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 JPT2Q9H910 190 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 UBE2D4Q9Y2X8 147 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 ABCA2Q9BZC7 2435 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 COL6A6A6NMZ7 2263 aa2.54□□□□□ -2
RNU6-55P-201ENST00000411092 TRBV10-1A0A0K0K1A3 114 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 B4DSR2 109 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 H7C2G1 150 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 TGFAP01135 160 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 IGHV3-11P01762 117 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 IGHV4-39P01824 125 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 MSMBP08118 114 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 SDIM1Q6ZPB5 146 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 UBE2E2Q96LR5 201 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 DUX3Q96PT4 197 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 CHCHD7Q9BUK0 85 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 PEMTQ9UBM1 199 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 HIVEP3Q5T1R4 2406 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 DOPEY2Q9Y3R5 2298 aa2.53□□□□□ -2
RNU6-55P-201ENST00000411092 CEP295Q9C0D2 2601 aa2.53□□□□□ -2.01
RNU6-55P-201ENST00000411092 MUC6Q6W4X9 2439 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 TRAV13-2A0A0B4J235 113 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 A0A1W2PPR1 153 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 CRLF1O75462 422 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 INSP01308 110 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 DEFB1P60022 68 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 DAZ2Q13117 558 aaKnown RBP2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 SPINK13Q1W4C9 94 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 ADAMTSL4-AS1Q5T5F5 129 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 BRD3OSQ6XYD6 125 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 DAZ4Q86SG3 579 aaKnown RBP2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 LINC00308Q8TCZ7 52 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 FAM104AQ969W3 186 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 CCL19Q99731 98 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 OPRPNQ99935 248 aaPredicted RBP2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 DAZ3Q9NR90 486 aaKnown RBP2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 SS18L2Q9UHA2 77 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 LINC00527Q9UJ94 153 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 NACAE9PAV3 2078 aa2.52□□□□□ -2.01
RNU6-55P-201ENST00000411092 IGKV3-7A0A075B6H7 116 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 IGHV3-64A0A075B6Q5 118 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 TRAV12-2A0A075B6T6 113 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 TRAV8-3A0A0A6YYJ7 113 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 TRAV25A0A0B4J276 109 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 IGHV4-61A0A0C4DH41 118 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 CCDC179H3BU77 68 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 ATOX1O00244 68 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 UQCRQO14949 82 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 RS1O15537 224 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 IGHV4-38-2P0DP08 117 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 BLCAPP62952 87 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 LY6EQ16553 131 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 MEIG1Q5JSS6 88 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 C11orf72Q8NBR9 251 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 ZNF625Q96I27 306 aaPredicted RBP2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 BEX4Q9NWD9 120 aaPredicted RBP2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 VPREB3Q9UKI3 123 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 MED13LQ71F56 2210 aa2.51□□□□□ -2.01
RNU6-55P-201ENST00000411092 SPTAN1Q13813 2472 aaKnown RBP2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 ZFHX2Q9C0A1 2572 aaPredicted RBP2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 AKAP13Q12802 2813 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 A0A1B0GX51 115 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 SMIM1B2RUZ4 78 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 H0YGX0 51 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 CRPP02741 224 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 RPL28P46779 137 aaKnown RBP2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 ATP5J2P56134 94 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 CMC4P56277 68 aaPredicted RBP2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 SYNJ2BPP57105 145 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 LINC01547P58512 204 aaPredicted RBP2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 TMEM95Q3KNT9 176 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 C14orf177Q52M58 125 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 S100A7L2Q5SY68 101 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 LINC00242Q5T6M2 205 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 ATP5EP2Q5VTU8 51 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 HIST2H2BDQ6DRA6 164 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 C5orf38Q86SI9 138 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 Q8N2B8 174 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 C3orf22Q8N5N4 141 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 C4orf3Q8WVX3 66 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 CLEC2BQ92478 149 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 LINC00526Q96FQ7 95 aa2.5□□□□□ -2.01
RNU6-55P-201ENST00000411092 CITED2Q99967 270 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms