RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 IGHV1-58A0A0C4DH39 117 aa9.18□□□□□ -0.94
MCF2L-210ENST00000409954 TRBV27A0A0K0K1C4 114 aa9.18□□□□□ -0.94
MCF2L-210ENST00000409954 TSHBP01222 138 aa9.18□□□□□ -0.94
MCF2L-210ENST00000409954 SMAGPQ0VAQ4 97 aa9.18□□□□□ -0.94
MCF2L-210ENST00000409954 RIGQ13278 110 aa9.18□□□□□ -0.94
MCF2L-210ENST00000409954 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
MCF2L-210ENST00000409954 MRPL52Q86TS9 123 aaKnown RBP9.18□□□□□ -0.94
MCF2L-210ENST00000409954 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
MCF2L-210ENST00000409954 PLA2G2DQ9UNK4 145 aa9.18□□□□□ -0.94
MCF2L-210ENST00000409954 CCL25O15444 150 aa9.17□□□□□ -0.94
MCF2L-210ENST00000409954 XCL1P47992 114 aa9.17□□□□□ -0.94
MCF2L-210ENST00000409954 CD164L2Q6UWJ8 174 aa9.17□□□□□ -0.94
MCF2L-210ENST00000409954 ZNF664Q8N3J9 261 aa9.17□□□□□ -0.94
MCF2L-210ENST00000409954 GAS8-AS1O95177 125 aa9.16□□□□□ -0.94
MCF2L-210ENST00000409954 SRP19P09132 144 aaKnown RBP9.16□□□□□ -0.94
MCF2L-210ENST00000409954 TMEM241Q24JQ0 296 aa9.16□□□□□ -0.94
MCF2L-210ENST00000409954 FAM74A3Q4VXF1 159 aa9.16□□□□□ -0.94
MCF2L-210ENST00000409954 STPG4Q8N801 248 aa9.16□□□□□ -0.94
MCF2L-210ENST00000409954 TMEM242Q9NWH2 141 aa9.16□□□□□ -0.94
MCF2L-210ENST00000409954 CSDC2Q9Y534 153 aaKnown RBP9.16□□□□□ -0.94
MCF2L-210ENST00000409954 IGKV2-24A0A0C4DH68 120 aa9.15□□□□□ -0.94
MCF2L-210ENST00000409954 C7orf77A4D0Y5 90 aa9.15□□□□□ -0.94
MCF2L-210ENST00000409954 ZNF561-AS1K7EIQ3 104 aa9.15□□□□□ -0.94
MCF2L-210ENST00000409954 AMN1Q8IY45 258 aa9.15□□□□□ -0.94
MCF2L-210ENST00000409954 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
MCF2L-210ENST00000409954 C1orf196B1AJZ1 125 aa9.14□□□□□ -0.95
MCF2L-210ENST00000409954 PHOX2AO14813 284 aa9.14□□□□□ -0.95
MCF2L-210ENST00000409954 FCER1GP30273 86 aa9.14□□□□□ -0.95
MCF2L-210ENST00000409954 NUP35Q8NFH5 326 aa9.14□□□□□ -0.95
MCF2L-210ENST00000409954 KIR2DL4Q99706 377 aa9.14□□□□□ -0.95
MCF2L-210ENST00000409954 V9GYV3 84 aa9.14□□□□□ -0.95
MCF2L-210ENST00000409954 hCG_2014768A0A024R1R8 64 aa9.13□□□□□ -0.95
MCF2L-210ENST00000409954 PPP1R2P9O14990 202 aa9.13□□□□□ -0.95
MCF2L-210ENST00000409954 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
MCF2L-210ENST00000409954 TMEM18Q96B42 140 aa9.13□□□□□ -0.95
MCF2L-210ENST00000409954 NAT8BQ9UHF3 227 aa9.13□□□□□ -0.95
MCF2L-210ENST00000409954 LINC00862A6NCI5 91 aa9.12□□□□□ -0.95
MCF2L-210ENST00000409954 SUMO2P61956 95 aaKnown RBP9.12□□□□□ -0.95
MCF2L-210ENST00000409954 SYCNQ0VAF6 134 aa9.12□□□□□ -0.95
MCF2L-210ENST00000409954 ISOC2Q96AB3 205 aa9.12□□□□□ -0.95
MCF2L-210ENST00000409954 CARD19Q96LW7 228 aa9.12□□□□□ -0.95
MCF2L-210ENST00000409954 A0A096LNI7 61 aa9.11□□□□□ -0.95
MCF2L-210ENST00000409954 A0A1B0GW15 77 aa9.11□□□□□ -0.95
MCF2L-210ENST00000409954 MALP21145 153 aa9.11□□□□□ -0.95
MCF2L-210ENST00000409954 FAM104BQ5XKR9 115 aa9.11□□□□□ -0.95
MCF2L-210ENST00000409954 TCAPO15273 167 aa9.1□□□□□ -0.95
MCF2L-210ENST00000409954 NRACQ8N912 160 aa9.1□□□□□ -0.95
MCF2L-210ENST00000409954 C20orf78Q9BR46 151 aa9.1□□□□□ -0.95
MCF2L-210ENST00000409954 TIMM21Q9BVV7 248 aa9.1□□□□□ -0.95
MCF2L-210ENST00000409954 TRBV24-1A0A075B6N3 115 aa9.09□□□□□ -0.95
MCF2L-210ENST00000409954 SMKR1H3BMG3 65 aa9.09□□□□□ -0.95
MCF2L-210ENST00000409954 COX7A2LO14548 114 aa9.09□□□□□ -0.95
MCF2L-210ENST00000409954 RPL23P62829 140 aaKnown RBP9.09□□□□□ -0.95
MCF2L-210ENST00000409954 LINC00526Q96FQ7 95 aa9.09□□□□□ -0.95
MCF2L-210ENST00000409954 SMDT1Q9H4I9 107 aa9.09□□□□□ -0.95
MCF2L-210ENST00000409954 NAT8Q9UHE5 227 aa9.09□□□□□ -0.95
MCF2L-210ENST00000409954 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
MCF2L-210ENST00000409954 SMIM27A0A1W2PRY6 76 aa9.08□□□□□ -0.96
MCF2L-210ENST00000409954 CAMPP49913 170 aa9.08□□□□□ -0.96
MCF2L-210ENST00000409954 RPL32P62910 135 aaKnown RBP9.08□□□□□ -0.96
MCF2L-210ENST00000409954 PRR3P79522 188 aaKnown RBP9.08□□□□□ -0.96
MCF2L-210ENST00000409954 PEA15Q15121 130 aa9.08□□□□□ -0.96
MCF2L-210ENST00000409954 MRPL51Q4U2R6 128 aaKnown RBP9.08□□□□□ -0.96
MCF2L-210ENST00000409954 LINC01600Q96MT4 127 aa9.08□□□□□ -0.96
MCF2L-210ENST00000409954 IGLV4-69A0A075B6H9 119 aa9.07□□□□□ -0.96
MCF2L-210ENST00000409954 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
MCF2L-210ENST00000409954 APOMO95445 188 aa9.07□□□□□ -0.96
MCF2L-210ENST00000409954 CKS2P33552 79 aa9.07□□□□□ -0.96
MCF2L-210ENST00000409954 ADIRFQ15847 76 aa9.07□□□□□ -0.96
MCF2L-210ENST00000409954 SPINK6Q6UWN8 80 aa9.07□□□□□ -0.96
MCF2L-210ENST00000409954 C2orf48Q96LS8 159 aa9.07□□□□□ -0.96
MCF2L-210ENST00000409954 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
MCF2L-210ENST00000409954 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
MCF2L-210ENST00000409954 S100A8P05109 93 aa9.06□□□□□ -0.96
MCF2L-210ENST00000409954 Q6ZRP5 223 aa9.06□□□□□ -0.96
MCF2L-210ENST00000409954 F8W036 122 aa9.05□□□□□ -0.96
MCF2L-210ENST00000409954 PTTG1IPP53801 180 aa9.05□□□□□ -0.96
MCF2L-210ENST00000409954 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
MCF2L-210ENST00000409954 CAMK2N2Q96S95 79 aa9.05□□□□□ -0.96
MCF2L-210ENST00000409954 HMCN2Q8NDA2 5059 aa9.05□□□□□ -0.96
MCF2L-210ENST00000409954 F8WDY8 70 aa9.04□□□□□ -0.96
MCF2L-210ENST00000409954 PPBPP02775 128 aa9.04□□□□□ -0.96
MCF2L-210ENST00000409954 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
MCF2L-210ENST00000409954 SRSF9Q13242 221 aaKnown RBP eCLIP9.04□□□□□ -0.96
MCF2L-210ENST00000409954 RNF151Q2KHN1 245 aa9.04□□□□□ -0.96
MCF2L-210ENST00000409954 C5orf38Q86SI9 138 aa9.04□□□□□ -0.96
MCF2L-210ENST00000409954 C9JQL5 133 aa9.03□□□□□ -0.96
MCF2L-210ENST00000409954 TNFRSF6BO95407 300 aa9.03□□□□□ -0.96
MCF2L-210ENST00000409954 RNASE13Q5GAN3 156 aaKnown RBP9.02□□□□□ -0.97
MCF2L-210ENST00000409954 OR10D4PQ8NGN7 298 aa9.02□□□□□ -0.97
MCF2L-210ENST00000409954 SPANXA1Q9NS26 97 aa9.02□□□□□ -0.97
MCF2L-210ENST00000409954 A0A0J9YXV3 536 aa9.01□□□□□ -0.97
MCF2L-210ENST00000409954 HBBP68871 147 aa9.01□□□□□ -0.97
MCF2L-210ENST00000409954 MRPS36P82909 103 aaKnown RBP9.01□□□□□ -0.97
MCF2L-210ENST00000409954 Q6ZUT4 128 aa9.01□□□□□ -0.97
MCF2L-210ENST00000409954 SMIM2Q9BVW6 85 aa9.01□□□□□ -0.97
MCF2L-210ENST00000409954 A0A1W2PNN7 141 aa9□□□□□ -0.97
MCF2L-210ENST00000409954 KRTAP10-8P60410 259 aa9□□□□□ -0.97
MCF2L-210ENST00000409954 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
MCF2L-210ENST00000409954 IMMP2LQ96T52 175 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms