RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ESDP10768 282 aa9.37□□□□□ -0.91
NIF3L1-205ENST00000409588 NUP35Q8NFH5 326 aa9.37□□□□□ -0.91
NIF3L1-205ENST00000409588 OR5A1Q8NGJ0 315 aa9.37□□□□□ -0.91
NIF3L1-205ENST00000409588 IGHV3-64A0A075B6Q5 118 aa9.36□□□□□ -0.91
NIF3L1-205ENST00000409588 A0A1B0GVG6 124 aa9.36□□□□□ -0.91
NIF3L1-205ENST00000409588 LINC00862A6NCI5 91 aa9.36□□□□□ -0.91
NIF3L1-205ENST00000409588 PPP1R2P9O14990 202 aa9.36□□□□□ -0.91
NIF3L1-205ENST00000409588 CCL25O15444 150 aa9.36□□□□□ -0.91
NIF3L1-205ENST00000409588 RPL23P62829 140 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-205ENST00000409588 MRPL52Q86TS9 123 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-205ENST00000409588 RNF185Q96GF1 192 aa9.36□□□□□ -0.91
NIF3L1-205ENST00000409588 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-205ENST00000409588 IGKV2-29A2NJV5 120 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-205ENST00000409588 GAGE12HA6NDE8 117 aa9.35□□□□□ -0.91
NIF3L1-205ENST00000409588 TCAPO15273 167 aa9.35□□□□□ -0.91
NIF3L1-205ENST00000409588 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-205ENST00000409588 SMIM27A0A1W2PRY6 76 aa9.34□□□□□ -0.91
NIF3L1-205ENST00000409588 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-205ENST00000409588 TSHBP01222 138 aa9.34□□□□□ -0.91
NIF3L1-205ENST00000409588 S100A8P05109 93 aa9.34□□□□□ -0.91
NIF3L1-205ENST00000409588 CIRBPQ14011 172 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-205ENST00000409588 AMN1Q8IY45 258 aa9.34□□□□□ -0.91
NIF3L1-205ENST00000409588 KIR2DL4Q99706 377 aa9.34□□□□□ -0.91
NIF3L1-205ENST00000409588 PKIGQ9Y2B9 76 aa9.34□□□□□ -0.91
NIF3L1-205ENST00000409588 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-205ENST00000409588 RPS10P46783 165 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-205ENST00000409588 SS18Q15532 418 aa9.33□□□□□ -0.92
NIF3L1-205ENST00000409588 ADIRFQ15847 76 aa9.33□□□□□ -0.92
NIF3L1-205ENST00000409588 DPH3Q96FX2 82 aa9.33□□□□□ -0.92
NIF3L1-205ENST00000409588 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 TRBV24-1A0A075B6N3 115 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 C7orf77A4D0Y5 90 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 FCER1GP30273 86 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 SUMO2P61956 95 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 FAM104BQ5XKR9 115 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 ZNF664Q8N3J9 261 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 TMEM18Q96B42 140 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 KRTAP4-2Q9BYR5 136 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 CDC42SE2Q9NRR3 84 aa9.32□□□□□ -0.92
NIF3L1-205ENST00000409588 HERC1Q15751 4861 aa9.31□□□□□ -0.92
NIF3L1-205ENST00000409588 LINC00959A0A1B0GUT2 108 aa9.31□□□□□ -0.92
NIF3L1-205ENST00000409588 F8W036 122 aa9.31□□□□□ -0.92
NIF3L1-205ENST00000409588 OXTP01178 125 aa9.31□□□□□ -0.92
NIF3L1-205ENST00000409588 SLPIP03973 132 aa9.31□□□□□ -0.92
NIF3L1-205ENST00000409588 KRTAP10-4P60372 401 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-205ENST00000409588 RPL32P62910 135 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-205ENST00000409588 C15orf56Q8N910 161 aa9.31□□□□□ -0.92
NIF3L1-205ENST00000409588 TMEM242Q9NWH2 141 aa9.31□□□□□ -0.92
NIF3L1-205ENST00000409588 GVQW2A0A096LPI5 108 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 C1orf196B1AJZ1 125 aa9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 C9JQL5 133 aa9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 GAS8-AS1O95177 125 aa9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 RPL37AP61513 92 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 FOXI1Q12951 378 aa9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 LCE4AQ5TA78 99 aa9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 CD164L2Q6UWJ8 174 aa9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 NRACQ8N912 160 aa9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-205ENST00000409588 IGHV1-58A0A0C4DH39 117 aa9.29□□□□□ -0.92
NIF3L1-205ENST00000409588 PPBPP02775 128 aa9.29□□□□□ -0.92
NIF3L1-205ENST00000409588 TIMM21Q9BVV7 248 aa9.29□□□□□ -0.92
NIF3L1-205ENST00000409588 LINC00474Q9P2X8 69 aa9.29□□□□□ -0.92
NIF3L1-205ENST00000409588 PHOX2AO14813 284 aa9.28□□□□□ -0.92
NIF3L1-205ENST00000409588 CKS2P33552 79 aa9.28□□□□□ -0.92
NIF3L1-205ENST00000409588 CAMPP49913 170 aa9.28□□□□□ -0.92
NIF3L1-205ENST00000409588 SRSF3P84103 164 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-205ENST00000409588 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-205ENST00000409588 XCL1P47992 114 aa9.27□□□□□ -0.93
NIF3L1-205ENST00000409588 ZNF561-AS1K7EIQ3 104 aa9.26□□□□□ -0.93
NIF3L1-205ENST00000409588 RAB14P61106 215 aa9.26□□□□□ -0.93
NIF3L1-205ENST00000409588 HBBP68871 147 aa9.26□□□□□ -0.93
NIF3L1-205ENST00000409588 ATP5L2Q7Z4Y8 100 aa9.26□□□□□ -0.93
NIF3L1-205ENST00000409588 SPACA4Q8TDM5 124 aa9.26□□□□□ -0.93
NIF3L1-205ENST00000409588 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
NIF3L1-205ENST00000409588 UBE2D4Q9Y2X8 147 aa9.26□□□□□ -0.93
NIF3L1-205ENST00000409588 A0A087WYN8 130 aa9.25□□□□□ -0.93
NIF3L1-205ENST00000409588 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
NIF3L1-205ENST00000409588 PANO1I0J062 215 aa9.25□□□□□ -0.93
NIF3L1-205ENST00000409588 COX6A2Q02221 97 aa9.25□□□□□ -0.93
NIF3L1-205ENST00000409588 PNRC1Q12796 327 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-205ENST00000409588 HIGD2BQ4VC39 106 aa9.25□□□□□ -0.93
NIF3L1-205ENST00000409588 TNFRSF6BO95407 300 aa9.24□□□□□ -0.93
NIF3L1-205ENST00000409588 C7orf33Q8WU49 177 aa9.24□□□□□ -0.93
NIF3L1-205ENST00000409588 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
NIF3L1-205ENST00000409588 MALP21145 153 aa9.23□□□□□ -0.93
NIF3L1-205ENST00000409588 COX7A2LO14548 114 aa9.22□□□□□ -0.93
NIF3L1-205ENST00000409588 APOMO95445 188 aa9.22□□□□□ -0.93
NIF3L1-205ENST00000409588 SERTAD4-AS1Q5TG53 156 aa9.22□□□□□ -0.93
NIF3L1-205ENST00000409588 Q6ZRU5 148 aa9.22□□□□□ -0.93
NIF3L1-205ENST00000409588 ANAPC16Q96DE5 110 aa9.22□□□□□ -0.93
NIF3L1-205ENST00000409588 SPANXA1Q9NS26 97 aa9.22□□□□□ -0.93
NIF3L1-205ENST00000409588 D6R8Y8 96 aa9.21□□□□□ -0.94
NIF3L1-205ENST00000409588 MT-ND4LP03901 98 aa9.21□□□□□ -0.94
NIF3L1-205ENST00000409588 SYCNQ0VAF6 134 aa9.21□□□□□ -0.94
NIF3L1-205ENST00000409588 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
NIF3L1-205ENST00000409588 ORMDL3Q8N138 153 aa9.21□□□□□ -0.94
NIF3L1-205ENST00000409588 PRSS3P2Q8NHM4 247 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms