RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 MALP21145 153 aa10.01□□□□□ -0.81
CHMP3-203ENST00000409225 MBD3L1Q8WWY6 194 aa10.01□□□□□ -0.81
CHMP3-203ENST00000409225 TRAV1-1A0A0B4J248 108 aa10□□□□□ -0.81
CHMP3-203ENST00000409225 SDHAF1A6NFY7 115 aa10□□□□□ -0.81
CHMP3-203ENST00000409225 EIF5AL1Q6IS14 154 aaKnown RBP10□□□□□ -0.81
CHMP3-203ENST00000409225 KRTAP11-1Q8IUC1 163 aa10□□□□□ -0.81
CHMP3-203ENST00000409225 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
CHMP3-203ENST00000409225 BCL2L11O43521 198 aa9.98□□□□□ -0.81
CHMP3-203ENST00000409225 PMCHP20382 165 aa9.98□□□□□ -0.81
CHMP3-203ENST00000409225 CTRLP40313 264 aa9.98□□□□□ -0.81
CHMP3-203ENST00000409225 C9orf62Q8N4C0 152 aa9.98□□□□□ -0.81
CHMP3-203ENST00000409225 RAB19A4D1S5 217 aa9.97□□□□□ -0.81
CHMP3-203ENST00000409225 I3L3M4 83 aa9.97□□□□□ -0.81
CHMP3-203ENST00000409225 COX7A2LO14548 114 aa9.97□□□□□ -0.81
CHMP3-203ENST00000409225 RPL13AP40429 203 aaKnown RBP9.97□□□□□ -0.81
CHMP3-203ENST00000409225 C11orf52Q96A22 123 aa9.97□□□□□ -0.81
CHMP3-203ENST00000409225 CDC42SE2Q9NRR3 84 aa9.97□□□□□ -0.81
CHMP3-203ENST00000409225 FAM168BA1KXE4 195 aa9.96□□□□□ -0.82
CHMP3-203ENST00000409225 TSPAN13O95857 204 aa9.96□□□□□ -0.82
CHMP3-203ENST00000409225 GNG4P50150 75 aa9.96□□□□□ -0.82
CHMP3-203ENST00000409225 FOXA3P55318 350 aaPredicted RBP9.96□□□□□ -0.82
CHMP3-203ENST00000409225 MRAP2Q96G30 205 aa9.96□□□□□ -0.82
CHMP3-203ENST00000409225 C2orf48Q96LS8 159 aa9.96□□□□□ -0.82
CHMP3-203ENST00000409225 TMEM242Q9NWH2 141 aa9.96□□□□□ -0.82
CHMP3-203ENST00000409225 MUC17Q685J3 4493 aa9.95□□□□□ -0.82
CHMP3-203ENST00000409225 ARPC5O15511 151 aa9.95□□□□□ -0.82
CHMP3-203ENST00000409225 H2AFB1P0C5Y9 115 aa9.95□□□□□ -0.82
CHMP3-203ENST00000409225 ESDP10768 282 aa9.95□□□□□ -0.82
CHMP3-203ENST00000409225 TSKUQ8WUA8 353 aa9.95□□□□□ -0.82
CHMP3-203ENST00000409225 TSHBP01222 138 aa9.94□□□□□ -0.82
CHMP3-203ENST00000409225 FAM19A5Q7Z5A7 132 aaPredicted RBP9.94□□□□□ -0.82
CHMP3-203ENST00000409225 CNFNQ9BYD5 112 aa9.94□□□□□ -0.82
CHMP3-203ENST00000409225 GNG13Q9P2W3 67 aa9.94□□□□□ -0.82
CHMP3-203ENST00000409225 C1orf196B1AJZ1 125 aa9.93□□□□□ -0.82
CHMP3-203ENST00000409225 UMAD1C9J7I0 102 aa9.93□□□□□ -0.82
CHMP3-203ENST00000409225 SPAG11BQ08648 103 aa9.93□□□□□ -0.82
CHMP3-203ENST00000409225 TEX261Q6UWH6 196 aa9.93□□□□□ -0.82
CHMP3-203ENST00000409225 SMIM15Q7Z3B0 74 aa9.93□□□□□ -0.82
CHMP3-203ENST00000409225 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
CHMP3-203ENST00000409225 MRPL52Q86TS9 123 aaKnown RBP9.93□□□□□ -0.82
CHMP3-203ENST00000409225 G3V3Q6 166 aa9.92□□□□□ -0.82
CHMP3-203ENST00000409225 CCL20P78556 96 aa9.92□□□□□ -0.82
CHMP3-203ENST00000409225 RNF151Q2KHN1 245 aa9.92□□□□□ -0.82
CHMP3-203ENST00000409225 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
CHMP3-203ENST00000409225 SMIM12Q96EX1 92 aa9.92□□□□□ -0.82
CHMP3-203ENST00000409225 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
CHMP3-203ENST00000409225 MANBALQ9NQG1 85 aa9.92□□□□□ -0.82
CHMP3-203ENST00000409225 RNASE13Q5GAN3 156 aaKnown RBP9.91□□□□□ -0.82
CHMP3-203ENST00000409225 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.82
CHMP3-203ENST00000409225 TRBV6-5A0A0K0K1A5 114 aa9.9□□□□□ -0.82
CHMP3-203ENST00000409225 UBE2BP63146 152 aa9.9□□□□□ -0.82
CHMP3-203ENST00000409225 RNASE7Q9H1E1 156 aaKnown RBP9.9□□□□□ -0.82
CHMP3-203ENST00000409225 ST20Q9HBF5 79 aa9.9□□□□□ -0.82
CHMP3-203ENST00000409225 BIN3Q9NQY0 253 aa9.9□□□□□ -0.82
CHMP3-203ENST00000409225 CARHSP1Q9Y2V2 147 aaKnown RBP9.9□□□□□ -0.82
CHMP3-203ENST00000409225 TRBV20OR9-2A0A075B6H5 130 aa9.89□□□□□ -0.83
CHMP3-203ENST00000409225 C7orf77A4D0Y5 90 aa9.89□□□□□ -0.83
CHMP3-203ENST00000409225 RPP21Q9H633 154 aaKnown RBP9.89□□□□□ -0.83
CHMP3-203ENST00000409225 IMMP2LQ96T52 175 aa9.88□□□□□ -0.83
CHMP3-203ENST00000409225 M0QXV9 152 aa9.87□□□□□ -0.83
CHMP3-203ENST00000409225 GAGE2EQ4V326 116 aa9.87□□□□□ -0.83
CHMP3-203ENST00000409225 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
CHMP3-203ENST00000409225 GAGE2DQ9UEU5 116 aa9.87□□□□□ -0.83
CHMP3-203ENST00000409225 OR10D4PQ8NGN7 298 aa9.86□□□□□ -0.83
CHMP3-203ENST00000409225 MED9Q9NWA0 146 aa9.86□□□□□ -0.83
CHMP3-203ENST00000409225 SMLR1H3BR10 107 aa9.85□□□□□ -0.83
CHMP3-203ENST00000409225 C10orf25Q5T742 122 aa9.85□□□□□ -0.83
CHMP3-203ENST00000409225 KRTAP7-1Q8IUC3 87 aa9.85□□□□□ -0.83
CHMP3-203ENST00000409225 ORAOV1Q8WV07 137 aa9.85□□□□□ -0.83
CHMP3-203ENST00000409225 NDUFA1O15239 70 aa9.84□□□□□ -0.83
CHMP3-203ENST00000409225 POLR2KP53803 58 aaKnown RBP9.84□□□□□ -0.83
CHMP3-203ENST00000409225 FAM210AQ96ND0 272 aa9.84□□□□□ -0.83
CHMP3-203ENST00000409225 UBE2D4Q9Y2X8 147 aa9.84□□□□□ -0.83
CHMP3-203ENST00000409225 TRBV27A0A0K0K1C4 114 aa9.83□□□□□ -0.84
CHMP3-203ENST00000409225 PDE6DO43924 150 aa9.83□□□□□ -0.84
CHMP3-203ENST00000409225 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
CHMP3-203ENST00000409225 UNQ6190/PRO20217Q6UXQ8 127 aa9.83□□□□□ -0.84
CHMP3-203ENST00000409225 Q6ZUT4 128 aa9.83□□□□□ -0.84
CHMP3-203ENST00000409225 K7EN84 100 aa9.82□□□□□ -0.84
CHMP3-203ENST00000409225 FCER1GP30273 86 aa9.82□□□□□ -0.84
CHMP3-203ENST00000409225 SMDT1Q9H4I9 107 aa9.82□□□□□ -0.84
CHMP3-203ENST00000409225 C6orf48Q9UBA6 75 aa9.82□□□□□ -0.84
CHMP3-203ENST00000409225 CSDC2Q9Y534 153 aaKnown RBP9.82□□□□□ -0.84
CHMP3-203ENST00000409225 F8WDY8 70 aa9.81□□□□□ -0.84
CHMP3-203ENST00000409225 ZNF861PO60384 105 aa9.81□□□□□ -0.84
CHMP3-203ENST00000409225 SMAGPQ0VAQ4 97 aa9.81□□□□□ -0.84
CHMP3-203ENST00000409225 ZNF345Q14585 488 aa9.81□□□□□ -0.84
CHMP3-203ENST00000409225 TMEM241Q24JQ0 296 aa9.8□□□□□ -0.84
CHMP3-203ENST00000409225 RETNLBQ9BQ08 111 aa9.8□□□□□ -0.84
CHMP3-203ENST00000409225 A0A087X002 238 aa9.79□□□□□ -0.84
CHMP3-203ENST00000409225 KANTRA0A1W2PQU2 76 aa9.79□□□□□ -0.84
CHMP3-203ENST00000409225 OCC1Q8TAD7 63 aa9.79□□□□□ -0.84
CHMP3-203ENST00000409225 TYMSOSQ8TAI1 123 aa9.79□□□□□ -0.84
CHMP3-203ENST00000409225 CDIP1Q9H305 208 aa9.79□□□□□ -0.84
CHMP3-203ENST00000409225 VCYO14598 125 aa9.78□□□□□ -0.84
CHMP3-203ENST00000409225 SMKR1H3BMG3 65 aa9.77□□□□□ -0.85
CHMP3-203ENST00000409225 TEX46H3BTG2 121 aa9.77□□□□□ -0.85
CHMP3-203ENST00000409225 GATCO43716 136 aaKnown RBP9.77□□□□□ -0.85
CHMP3-203ENST00000409225 CRCT1Q9UGL9 99 aa9.77□□□□□ -0.85
CHMP3-203ENST00000409225 RAB4AP20338 218 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms