RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
SYNC-202ENST00000409190 SBSPONQ8IVN8 264 aa12.22□□□□□ -0.45
SYNC-202ENST00000409190 ZNF702PQ9H963 129 aa12.21□□□□□ -0.45
SYNC-202ENST00000409190 SS18L2Q9UHA2 77 aa12.21□□□□□ -0.45
SYNC-202ENST00000409190 ZNF415Q09FC8 603 aa12.21□□□□□ -0.45
SYNC-202ENST00000409190 GAGE2BQ13066 116 aa12.21□□□□□ -0.45
SYNC-202ENST00000409190 GAGE2EQ4V326 116 aa12.21□□□□□ -0.45
SYNC-202ENST00000409190 Q9H8V8 135 aa12.21□□□□□ -0.45
SYNC-202ENST00000409190 GAGE2DQ9UEU5 116 aa12.21□□□□□ -0.45
SYNC-202ENST00000409190 UBE2WQ96B02 151 aa12.21□□□□□ -0.46
SYNC-202ENST00000409190 COX6CP09669 75 aa12.2□□□□□ -0.46
SYNC-202ENST00000409190 FLNAP21333 2647 aaKnown RBP12.2□□□□□ -0.46
SYNC-202ENST00000409190 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
SYNC-202ENST00000409190 LINC00694P0DN24 101 aa12.2□□□□□ -0.46
SYNC-202ENST00000409190 B5MCH6 92 aa12.19□□□□□ -0.46
SYNC-202ENST00000409190 C15orf53Q8NAA6 179 aa12.19□□□□□ -0.46
SYNC-202ENST00000409190 MEIG1Q5JSS6 88 aa12.19□□□□□ -0.46
SYNC-202ENST00000409190 SETXQ7Z333 2677 aaKnown RBP12.19□□□□□ -0.46
SYNC-202ENST00000409190 H7C423 109 aa12.19□□□□□ -0.46
SYNC-202ENST00000409190 MIAQ16674 131 aa12.19□□□□□ -0.46
SYNC-202ENST00000409190 MAP6D1Q9H9H5 199 aa12.18□□□□□ -0.46
SYNC-202ENST00000409190 TRBV10-2A0A0K0K1G8 114 aa12.18□□□□□ -0.46
SYNC-202ENST00000409190 HIVEP2P31629 2446 aa12.18□□□□□ -0.46
SYNC-202ENST00000409190 AKAP9Q99996 3911 aa12.18□□□□□ -0.46
SYNC-202ENST00000409190 TMEM101Q96IK0 257 aa12.18□□□□□ -0.46
SYNC-202ENST00000409190 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
SYNC-202ENST00000409190 GAGE4Q13068 117 aa12.17□□□□□ -0.46
SYNC-202ENST00000409190 GAGE5Q13069 117 aa12.17□□□□□ -0.46
SYNC-202ENST00000409190 PYGO1Q9Y3Y4 419 aa12.17□□□□□ -0.46
SYNC-202ENST00000409190 ZNF469Q96JG9 3925 aaPredicted RBP12.17□□□□□ -0.46
SYNC-202ENST00000409190 KRTAP10-9P60411 292 aa12.17□□□□□ -0.46
SYNC-202ENST00000409190 C3orf56Q8N813 242 aa12.16□□□□□ -0.46
SYNC-202ENST00000409190 ITPR3Q14573 2671 aa12.16□□□□□ -0.46
SYNC-202ENST00000409190 GCN1Q92616 2671 aaKnown RBP12.16□□□□□ -0.46
SYNC-202ENST00000409190 TRBV30A0A0K0K1B3 111 aa12.16□□□□□ -0.46
SYNC-202ENST00000409190 TINCRA0A1B0GVN0 87 aa12.16□□□□□ -0.46
SYNC-202ENST00000409190 TMEM89A2RUT3 159 aa12.15□□□□□ -0.46
SYNC-202ENST00000409190 TOMM7Q9P0U1 55 aa12.15□□□□□ -0.46
SYNC-202ENST00000409190 Q6ZTI0 123 aa12.14□□□□□ -0.47
SYNC-202ENST00000409190 PRIMA1Q86XR5 153 aa12.14□□□□□ -0.47
SYNC-202ENST00000409190 SPANXA1Q9NS26 97 aa12.14□□□□□ -0.47
SYNC-202ENST00000409190 INSP01308 110 aa12.13□□□□□ -0.47
SYNC-202ENST00000409190 PLA2G2AP14555 144 aa12.13□□□□□ -0.47
SYNC-202ENST00000409190 PIK3CD-AS1Q5SR53 167 aa12.13□□□□□ -0.47
SYNC-202ENST00000409190 STHQ8IWL8 128 aa12.13□□□□□ -0.47
SYNC-202ENST00000409190 Q8N2B8 174 aa12.13□□□□□ -0.47
SYNC-202ENST00000409190 C11orf72Q8NBR9 251 aa12.12□□□□□ -0.47
SYNC-202ENST00000409190 WFDC10AQ9H1F0 79 aa12.12□□□□□ -0.47
SYNC-202ENST00000409190 CIRBPQ14011 172 aaKnown RBP12.12□□□□□ -0.47
SYNC-202ENST00000409190 Q6YL49 198 aa12.12□□□□□ -0.47
SYNC-202ENST00000409190 USP24Q9UPU5 2620 aa12.12□□□□□ -0.47
SYNC-202ENST00000409190 CCDC179H3BU77 68 aa12.11□□□□□ -0.47
SYNC-202ENST00000409190 PEMTQ9UBM1 199 aa12.11□□□□□ -0.47
SYNC-202ENST00000409190 LINC00242Q5T6M2 205 aa12.11□□□□□ -0.47
SYNC-202ENST00000409190 SPANXDQ9BXN6 97 aa12.11□□□□□ -0.47
SYNC-202ENST00000409190 SPANXCQ9NY87 97 aa12.11□□□□□ -0.47
SYNC-202ENST00000409190 CITED1Q99966 193 aa12.1□□□□□ -0.47
SYNC-202ENST00000409190 NOP10Q9NPE3 64 aaKnown RBP12.1□□□□□ -0.47
SYNC-202ENST00000409190 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
SYNC-202ENST00000409190 LINC00308Q8TCZ7 52 aa12.1□□□□□ -0.47
SYNC-202ENST00000409190 CITED2Q99967 270 aaPredicted RBP12.1□□□□□ -0.47
SYNC-202ENST00000409190 NDUFV3P56181 108 aaKnown RBP12.1□□□□□ -0.47
SYNC-202ENST00000409190 NHLRC4P0CG21 123 aaPredicted RBP12.09□□□□□ -0.47
SYNC-202ENST00000409190 RPL35AP18077 110 aaKnown RBP12.09□□□□□ -0.47
SYNC-202ENST00000409190 DEFB114Q30KQ6 69 aa12.09□□□□□ -0.47
SYNC-202ENST00000409190 SOSTDC1Q6X4U4 206 aa12.09□□□□□ -0.47
SYNC-202ENST00000409190 SVIPQ8NHG7 77 aa12.09□□□□□ -0.47
SYNC-202ENST00000409190 C11orf68Q9H3H3 251 aaKnown RBP12.09□□□□□ -0.47
SYNC-202ENST00000409190 YAE1D1Q9NRH1 226 aa12.09□□□□□ -0.47
SYNC-202ENST00000409190 ODF3L2Q3SX64 289 aa12.09□□□□□ -0.47
SYNC-202ENST00000409190 LST1O00453 97 aa12.08□□□□□ -0.48
SYNC-202ENST00000409190 IGHV4-31P0DP07 118 aa12.08□□□□□ -0.48
SYNC-202ENST00000409190 APCP25054 2843 aa12.07□□□□□ -0.48
SYNC-202ENST00000409190 GAGE7O76087 117 aa12.07□□□□□ -0.48
SYNC-202ENST00000409190 GAGE12FP0CL80 117 aa12.07□□□□□ -0.48
SYNC-202ENST00000409190 GAGE12GP0CL81 117 aa12.07□□□□□ -0.48
SYNC-202ENST00000409190 GAGE12IP0CL82 117 aa12.07□□□□□ -0.48
SYNC-202ENST00000409190 IFITM1P13164 125 aa12.07□□□□□ -0.48
SYNC-202ENST00000409190 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
SYNC-202ENST00000409190 C1orf158Q8N1D5 194 aa12.07□□□□□ -0.48
SYNC-202ENST00000409190 Q9HAA7 133 aa12.07□□□□□ -0.48
SYNC-202ENST00000409190 TRGV2A0A075B6R0 118 aa12.06□□□□□ -0.48
SYNC-202ENST00000409190 RPL36AP83881 106 aaKnown RBP12.06□□□□□ -0.48
SYNC-202ENST00000409190 RPL36ALQ969Q0 106 aaKnown RBP12.06□□□□□ -0.48
SYNC-202ENST00000409190 Q96MF0 132 aa12.06□□□□□ -0.48
SYNC-202ENST00000409190 UBE2L6O14933 153 aa12.05□□□□□ -0.48
SYNC-202ENST00000409190 NDUFA1O15239 70 aa12.05□□□□□ -0.48
SYNC-202ENST00000409190 DSCR9P59020 149 aa12.05□□□□□ -0.48
SYNC-202ENST00000409190 GAGE6Q13070 117 aa12.05□□□□□ -0.48
SYNC-202ENST00000409190 SMIM1B2RUZ4 78 aa12.05□□□□□ -0.48
SYNC-202ENST00000409190 RS1O15537 224 aa12.05□□□□□ -0.48
SYNC-202ENST00000409190 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
SYNC-202ENST00000409190 A0A096LNT2 108 aa12.04□□□□□ -0.48
SYNC-202ENST00000409190 HERVK_113P63121 156 aa12.04□□□□□ -0.48
SYNC-202ENST00000409190 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
SYNC-202ENST00000409190 H3BT86 120 aa12.02□□□□□ -0.49
SYNC-202ENST00000409190 J3QLI3 93 aa12.02□□□□□ -0.49
SYNC-202ENST00000409190 PFN2P35080 140 aa12.02□□□□□ -0.49
SYNC-202ENST00000409190 K7EQD1 137 aa12.01□□□□□ -0.49
SYNC-202ENST00000409190 C4orf3Q8WVX3 66 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms