RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
SDF4-203ENST00000403997 C15orf56Q8N910 161 aa8.54□□□□□ -1.04
SDF4-203ENST00000403997 LINC00959A0A1B0GUT2 108 aa8.53□□□□□ -1.04
SDF4-203ENST00000403997 C7orf77A4D0Y5 90 aa8.53□□□□□ -1.04
SDF4-203ENST00000403997 PANO1I0J062 215 aa8.53□□□□□ -1.04
SDF4-203ENST00000403997 J3QL48 77 aa8.53□□□□□ -1.04
SDF4-203ENST00000403997 XCL1P47992 114 aa8.53□□□□□ -1.04
SDF4-203ENST00000403997 SUMO2P61956 95 aaKnown RBP8.53□□□□□ -1.04
SDF4-203ENST00000403997 MRPL51Q4U2R6 128 aaKnown RBP8.53□□□□□ -1.04
SDF4-203ENST00000403997 FAM104BQ5XKR9 115 aa8.53□□□□□ -1.04
SDF4-203ENST00000403997 NRACQ8N912 160 aa8.53□□□□□ -1.04
SDF4-203ENST00000403997 A0A1B0GW15 77 aa8.52□□□□□ -1.05
SDF4-203ENST00000403997 PPP1R2P9O14990 202 aa8.52□□□□□ -1.05
SDF4-203ENST00000403997 CCL25O15444 150 aa8.52□□□□□ -1.05
SDF4-203ENST00000403997 FOXI1Q12951 378 aa8.52□□□□□ -1.05
SDF4-203ENST00000403997 MRPL52Q86TS9 123 aaKnown RBP8.52□□□□□ -1.05
SDF4-203ENST00000403997 KIR2DL4Q99706 377 aa8.52□□□□□ -1.05
SDF4-203ENST00000403997 CDC42SE2Q9NRR3 84 aa8.52□□□□□ -1.05
SDF4-203ENST00000403997 MYCBP2O75592 4640 aa8.52□□□□□ -1.05
SDF4-203ENST00000403997 CKS2P33552 79 aa8.51□□□□□ -1.05
SDF4-203ENST00000403997 KRTAP10-4P60372 401 aaPredicted RBP8.51□□□□□ -1.05
SDF4-203ENST00000403997 RPL37AP61513 92 aaKnown RBP8.51□□□□□ -1.05
SDF4-203ENST00000403997 SS18Q15532 418 aa8.51□□□□□ -1.05
SDF4-203ENST00000403997 ZNF664Q8N3J9 261 aa8.51□□□□□ -1.05
SDF4-203ENST00000403997 LINC00862A6NCI5 91 aa8.5□□□□□ -1.05
SDF4-203ENST00000403997 F8W036 122 aa8.5□□□□□ -1.05
SDF4-203ENST00000403997 S100A8P05109 93 aa8.5□□□□□ -1.05
SDF4-203ENST00000403997 CHTF8P0CG12 524 aa8.5□□□□□ -1.05
SDF4-203ENST00000403997 MRPL54Q6P161 138 aaKnown RBP8.5□□□□□ -1.05
SDF4-203ENST00000403997 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
SDF4-203ENST00000403997 HBBP68871 147 aa8.49□□□□□ -1.05
SDF4-203ENST00000403997 COX6A2Q02221 97 aa8.49□□□□□ -1.05
SDF4-203ENST00000403997 SMAGPQ0VAQ4 97 aa8.49□□□□□ -1.05
SDF4-203ENST00000403997 CIRBPQ14011 172 aaKnown RBP8.49□□□□□ -1.05
SDF4-203ENST00000403997 C20orf78Q9BR46 151 aa8.49□□□□□ -1.05
SDF4-203ENST00000403997 TRBV24-1A0A075B6N3 115 aa8.48□□□□□ -1.05
SDF4-203ENST00000403997 A0A087WYN8 130 aa8.48□□□□□ -1.05
SDF4-203ENST00000403997 IGHV1-58A0A0C4DH39 117 aa8.48□□□□□ -1.05
SDF4-203ENST00000403997 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
SDF4-203ENST00000403997 RAB14P61106 215 aa8.48□□□□□ -1.05
SDF4-203ENST00000403997 CD164L2Q6UWJ8 174 aa8.48□□□□□ -1.05
SDF4-203ENST00000403997 TMEM18Q96B42 140 aa8.48□□□□□ -1.05
SDF4-203ENST00000403997 UBE2D4Q9Y2X8 147 aa8.48□□□□□ -1.05
SDF4-203ENST00000403997 CSDC2Q9Y534 153 aaKnown RBP8.48□□□□□ -1.05
SDF4-203ENST00000403997 A0A1B0GXF2 115 aa8.47□□□□□ -1.05
SDF4-203ENST00000403997 D6R8Y8 96 aa8.47□□□□□ -1.05
SDF4-203ENST00000403997 TNFRSF6BO95407 300 aa8.47□□□□□ -1.05
SDF4-203ENST00000403997 RNASE13Q5GAN3 156 aaKnown RBP8.47□□□□□ -1.05
SDF4-203ENST00000403997 PRSS3P2Q8NHM4 247 aa8.47□□□□□ -1.05
SDF4-203ENST00000403997 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
SDF4-203ENST00000403997 TRAV13-1A0A0B4J241 112 aa8.46□□□□□ -1.06
SDF4-203ENST00000403997 C1orf196B1AJZ1 125 aa8.46□□□□□ -1.06
SDF4-203ENST00000403997 TCAPO15273 167 aa8.46□□□□□ -1.06
SDF4-203ENST00000403997 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.06
SDF4-203ENST00000403997 LINC00526Q96FQ7 95 aa8.46□□□□□ -1.06
SDF4-203ENST00000403997 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
SDF4-203ENST00000403997 NPYP01303 97 aa8.45□□□□□ -1.06
SDF4-203ENST00000403997 MALP21145 153 aa8.45□□□□□ -1.06
SDF4-203ENST00000403997 MAJINQ3KP22 176 aa8.45□□□□□ -1.06
SDF4-203ENST00000403997 TIMM21Q9BVV7 248 aa8.45□□□□□ -1.06
SDF4-203ENST00000403997 SMIM2Q9BVW6 85 aa8.45□□□□□ -1.06
SDF4-203ENST00000403997 ZNF561-AS1K7EIQ3 104 aa8.44□□□□□ -1.06
SDF4-203ENST00000403997 COX7A2LO14548 114 aa8.44□□□□□ -1.06
SDF4-203ENST00000403997 PPBPP02775 128 aa8.44□□□□□ -1.06
SDF4-203ENST00000403997 RPL39P62891 51 aaKnown RBP8.44□□□□□ -1.06
SDF4-203ENST00000403997 Q6ZUT4 128 aa8.44□□□□□ -1.06
SDF4-203ENST00000403997 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
SDF4-203ENST00000403997 PLAC8Q9NZF1 115 aa8.44□□□□□ -1.06
SDF4-203ENST00000403997 PHOX2AO14813 284 aa8.43□□□□□ -1.06
SDF4-203ENST00000403997 MT-ND4LP03901 98 aa8.43□□□□□ -1.06
SDF4-203ENST00000403997 HNRNPA3P51991 378 aaKnown RBP8.43□□□□□ -1.06
SDF4-203ENST00000403997 PNRC1Q12796 327 aaPredicted RBP8.43□□□□□ -1.06
SDF4-203ENST00000403997 TMEM136Q6ZRR5 245 aa8.43□□□□□ -1.06
SDF4-203ENST00000403997 ORMDL3Q8N138 153 aa8.43□□□□□ -1.06
SDF4-203ENST00000403997 CARD19Q96LW7 228 aa8.43□□□□□ -1.06
SDF4-203ENST00000403997 OXTP01178 125 aa8.42□□□□□ -1.06
SDF4-203ENST00000403997 SYCNQ0VAF6 134 aa8.42□□□□□ -1.06
SDF4-203ENST00000403997 C5orf38Q86SI9 138 aa8.42□□□□□ -1.06
SDF4-203ENST00000403997 STPG4Q8N801 248 aa8.42□□□□□ -1.06
SDF4-203ENST00000403997 ANAPC16Q96DE5 110 aa8.42□□□□□ -1.06
SDF4-203ENST00000403997 PRELID3AQ96N28 172 aa8.42□□□□□ -1.06
SDF4-203ENST00000403997 IGLV4-69A0A075B6H9 119 aa8.41□□□□□ -1.06
SDF4-203ENST00000403997 A0A096LNI7 61 aa8.41□□□□□ -1.06
SDF4-203ENST00000403997 RAB5AP20339 215 aa8.41□□□□□ -1.06
SDF4-203ENST00000403997 C7orf33Q8WU49 177 aa8.41□□□□□ -1.06
SDF4-203ENST00000403997 SPANXA1Q9NS26 97 aa8.41□□□□□ -1.06
SDF4-203ENST00000403997 PKIGQ9Y2B9 76 aa8.41□□□□□ -1.06
SDF4-203ENST00000403997 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
SDF4-203ENST00000403997 LINC00474Q9P2X8 69 aa8.4□□□□□ -1.06
SDF4-203ENST00000403997 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
SDF4-203ENST00000403997 APOMO95445 188 aa8.39□□□□□ -1.07
SDF4-203ENST00000403997 CLLU1Q5K131 121 aa8.39□□□□□ -1.07
SDF4-203ENST00000403997 FAM104AQ969W3 186 aa8.39□□□□□ -1.07
SDF4-203ENST00000403997 MRPS36P82909 103 aaKnown RBP8.38□□□□□ -1.07
SDF4-203ENST00000403997 Q6ZRU5 148 aa8.38□□□□□ -1.07
SDF4-203ENST00000403997 CAMK2N2Q96S95 79 aa8.38□□□□□ -1.07
SDF4-203ENST00000403997 LOC107984640A0A0U1RRK4 108 aa8.37□□□□□ -1.07
SDF4-203ENST00000403997 IFITM10A6NMD0 228 aa8.37□□□□□ -1.07
SDF4-203ENST00000403997 MAP1LC3AQ9H492 121 aa8.37□□□□□ -1.07
SDF4-203ENST00000403997 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms