RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 A0A0J9YXY3 114 aa11.77□□□□□ -0.52
PDGFA-203ENST00000402802 ACYP1P07311 99 aa11.77□□□□□ -0.52
PDGFA-203ENST00000402802 LINC00694P0DN24 101 aa11.77□□□□□ -0.52
PDGFA-203ENST00000402802 SLURP1P55000 103 aa11.77□□□□□ -0.52
PDGFA-203ENST00000402802 DEFB1P60022 68 aa11.77□□□□□ -0.52
PDGFA-203ENST00000402802 RNF152Q8N8N0 203 aa11.77□□□□□ -0.52
PDGFA-203ENST00000402802 FAM236AA0A1B0GUQ0 79 aa11.77□□□□□ -0.53
PDGFA-203ENST00000402802 FAM236BA0A1B0GV22 79 aa11.77□□□□□ -0.53
PDGFA-203ENST00000402802 A0A1W2PRX2 142 aa11.77□□□□□ -0.53
PDGFA-203ENST00000402802 RNASE1P07998 156 aaKnown RBP11.77□□□□□ -0.53
PDGFA-203ENST00000402802 RNASE3P12724 160 aaKnown RBP11.77□□□□□ -0.53
PDGFA-203ENST00000402802 HOXD3P31249 432 aaPredicted RBP11.77□□□□□ -0.53
PDGFA-203ENST00000402802 C3orf22Q8N5N4 141 aa11.77□□□□□ -0.53
PDGFA-203ENST00000402802 BAHCC1Q9P281 2608 aa11.77□□□□□ -0.53
PDGFA-203ENST00000402802 TRBV27A0A0K0K1C4 114 aa11.76□□□□□ -0.53
PDGFA-203ENST00000402802 LST1O00453 97 aa11.76□□□□□ -0.53
PDGFA-203ENST00000402802 NDUFA7O95182 113 aa11.76□□□□□ -0.53
PDGFA-203ENST00000402802 ZNF22P17026 224 aaPredicted RBP11.76□□□□□ -0.53
PDGFA-203ENST00000402802 HILS1P60008 231 aa11.76□□□□□ -0.53
PDGFA-203ENST00000402802 TRGV11A0A075B6L2 103 aa11.76□□□□□ -0.53
PDGFA-203ENST00000402802 LINC01006Q8NI28 216 aa11.76□□□□□ -0.53
PDGFA-203ENST00000402802 WNK1Q9H4A3 2382 aa11.76□□□□□ -0.53
PDGFA-203ENST00000402802 F8P00451 2351 aa11.75□□□□□ -0.53
PDGFA-203ENST00000402802 CD28P10747 220 aa11.75□□□□□ -0.53
PDGFA-203ENST00000402802 C9orf153Q5TBE3 101 aa11.75□□□□□ -0.53
PDGFA-203ENST00000402802 SUMO4Q6EEV6 95 aa11.75□□□□□ -0.53
PDGFA-203ENST00000402802 C20orf173Q96LM9 149 aa11.75□□□□□ -0.53
PDGFA-203ENST00000402802 GNRH2O43555 120 aa11.75□□□□□ -0.53
PDGFA-203ENST00000402802 LITAFQ99732 161 aa11.75□□□□□ -0.53
PDGFA-203ENST00000402802 CITED2Q99967 270 aaPredicted RBP11.75□□□□□ -0.53
PDGFA-203ENST00000402802 TRBV6-5A0A0K0K1A5 114 aa11.74□□□□□ -0.53
PDGFA-203ENST00000402802 LOC107984640A0A0U1RRK4 108 aa11.74□□□□□ -0.53
PDGFA-203ENST00000402802 OVOL1O14753 267 aa11.74□□□□□ -0.53
PDGFA-203ENST00000402802 UQCRQO14949 82 aa11.74□□□□□ -0.53
PDGFA-203ENST00000402802 DEFB104AQ8WTQ1 72 aa11.74□□□□□ -0.53
PDGFA-203ENST00000402802 ATP5G1P05496 136 aa11.73□□□□□ -0.53
PDGFA-203ENST00000402802 APRG1Q8IVJ8 170 aa11.73□□□□□ -0.53
PDGFA-203ENST00000402802 LINC00526Q96FQ7 95 aa11.73□□□□□ -0.53
PDGFA-203ENST00000402802 FAM19A4Q96LR4 140 aa11.73□□□□□ -0.53
PDGFA-203ENST00000402802 SPANXCQ9NY87 97 aa11.73□□□□□ -0.53
PDGFA-203ENST00000402802 NIPBLQ6KC79 2804 aaeCLIP11.73□□□□□ -0.53
PDGFA-203ENST00000402802 C2CD3Q4AC94 2353 aa11.73□□□□□ -0.53
PDGFA-203ENST00000402802 IGHV3-64A0A075B6Q5 118 aa11.72□□□□□ -0.53
PDGFA-203ENST00000402802 RNASE4P34096 147 aaKnown RBP11.72□□□□□ -0.53
PDGFA-203ENST00000402802 RHOHQ15669 191 aa11.72□□□□□ -0.53
PDGFA-203ENST00000402802 NSUN5P1Q3KNT7 163 aa11.72□□□□□ -0.53
PDGFA-203ENST00000402802 CLEC2BQ92478 149 aa11.72□□□□□ -0.53
PDGFA-203ENST00000402802 JMJD1CQ15652 2540 aa11.72□□□□□ -0.53
PDGFA-203ENST00000402802 FAM19A5Q7Z5A7 132 aaPredicted RBP11.71□□□□□ -0.53
PDGFA-203ENST00000402802 OPRPNQ99935 248 aaPredicted RBP11.71□□□□□ -0.53
PDGFA-203ENST00000402802 A0A1B0GX51 115 aa11.71□□□□□ -0.54
PDGFA-203ENST00000402802 CYSRT1A8MQ03 144 aa11.71□□□□□ -0.54
PDGFA-203ENST00000402802 K7EMT4 169 aa11.71□□□□□ -0.54
PDGFA-203ENST00000402802 SOCS3O14543 225 aa11.71□□□□□ -0.54
PDGFA-203ENST00000402802 PRSS2P07478 247 aa11.71□□□□□ -0.54
PDGFA-203ENST00000402802 C4orf3Q8WVX3 66 aa11.71□□□□□ -0.54
PDGFA-203ENST00000402802 ZNF256Q9Y2P7 627 aaPredicted RBP11.71□□□□□ -0.54
PDGFA-203ENST00000402802 F6UB75 175 aa11.7□□□□□ -0.54
PDGFA-203ENST00000402802 IGHV3-30-3P0DP02 117 aa11.7□□□□□ -0.54
PDGFA-203ENST00000402802 HERVK_113P63121 156 aa11.7□□□□□ -0.54
PDGFA-203ENST00000402802 SORL1Q92673 2214 aa11.7□□□□□ -0.54
PDGFA-203ENST00000402802 MUC4Q99102 2169 aa11.7□□□□□ -0.54
PDGFA-203ENST00000402802 F5H697 171 aa11.7□□□□□ -0.54
PDGFA-203ENST00000402802 I3L3M4 83 aa11.7□□□□□ -0.54
PDGFA-203ENST00000402802 J3KT08 172 aa11.7□□□□□ -0.54
PDGFA-203ENST00000402802 CEMP1Q6PRD7 247 aaPredicted RBP11.7□□□□□ -0.54
PDGFA-203ENST00000402802 LINC00643Q86TS7 51 aa11.7□□□□□ -0.54
PDGFA-203ENST00000402802 A0A0J9YXV3 536 aa11.69□□□□□ -0.54
PDGFA-203ENST00000402802 MIAQ16674 131 aa11.69□□□□□ -0.54
PDGFA-203ENST00000402802 TEP1Q99973 2627 aaKnown RBP11.69□□□□□ -0.54
PDGFA-203ENST00000402802 JPT2Q9H910 190 aa11.69□□□□□ -0.54
PDGFA-203ENST00000402802 TIMM21Q9BVV7 248 aa11.68□□□□□ -0.54
PDGFA-203ENST00000402802 C16orf95Q9H693 158 aa11.68□□□□□ -0.54
PDGFA-203ENST00000402802 A0A087WWL8 130 aa11.68□□□□□ -0.54
PDGFA-203ENST00000402802 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
PDGFA-203ENST00000402802 TMEM61Q8N0U2 210 aa11.68□□□□□ -0.54
PDGFA-203ENST00000402802 DCANP1Q8TF63 244 aa11.68□□□□□ -0.54
PDGFA-203ENST00000402802 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
PDGFA-203ENST00000402802 TRAV8-3A0A0A6YYJ7 113 aa11.66□□□□□ -0.54
PDGFA-203ENST00000402802 CXCL5P42830 114 aa11.66□□□□□ -0.54
PDGFA-203ENST00000402802 SDIM1Q6ZPB5 146 aa11.66□□□□□ -0.54
PDGFA-203ENST00000402802 IGLV4-3A0A075B6K6 122 aa11.66□□□□□ -0.54
PDGFA-203ENST00000402802 ADARB2-AS1A8MUL3 147 aa11.66□□□□□ -0.54
PDGFA-203ENST00000402802 RPS28P62857 69 aaKnown RBP11.66□□□□□ -0.54
PDGFA-203ENST00000402802 SMCR5Q8TEV8 140 aa11.65□□□□□ -0.54
PDGFA-203ENST00000402802 KRTAP10-3P60369 221 aa11.65□□□□□ -0.54
PDGFA-203ENST00000402802 COX7CP15954 63 aa11.64□□□□□ -0.55
PDGFA-203ENST00000402802 NDUFA12Q9UI09 145 aa11.64□□□□□ -0.55
PDGFA-203ENST00000402802 IGHV1-58A0A0C4DH39 117 aa11.64□□□□□ -0.55
PDGFA-203ENST00000402802 M0QY20 66 aa11.64□□□□□ -0.55
PDGFA-203ENST00000402802 PROK1P58294 105 aa11.64□□□□□ -0.55
PDGFA-203ENST00000402802 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
PDGFA-203ENST00000402802 OR13C6PQ8NH95 151 aa11.64□□□□□ -0.55
PDGFA-203ENST00000402802 TENM1Q9UKZ4 2725 aa11.63□□□□□ -0.55
PDGFA-203ENST00000402802 MRPS36P82909 103 aaKnown RBP11.63□□□□□ -0.55
PDGFA-203ENST00000402802 CCL24O00175 119 aa11.63□□□□□ -0.55
PDGFA-203ENST00000402802 CRYGAP11844 174 aa11.63□□□□□ -0.55
PDGFA-203ENST00000402802 KLLNB2CW77 178 aa11.61□□□□□ -0.55
PDGFA-203ENST00000402802 TIMM17BO60830 172 aa11.61□□□□□ -0.55
PDGFA-203ENST00000402802 PEMTQ9UBM1 199 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms