RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 LINC00472Q9H8W2 130 aa0.13□□□□□ -2.39
CBX3P9-201ENST00000402326 LRP1Q07954 4544 aaKnown RBP0.13□□□□□ -2.39
CBX3P9-201ENST00000402326 EIF4G3O43432 1585 aaKnown RBP0.13□□□□□ -2.39
CBX3P9-201ENST00000402326 KDM3BQ7LBC6 1761 aa0.13□□□□□ -2.39
CBX3P9-201ENST00000402326 PLXNB2O15031 1838 aa0.13□□□□□ -2.39
CBX3P9-201ENST00000402326 SMG6Q86US8 1419 aaKnown RBP0.13□□□□□ -2.39
CBX3P9-201ENST00000402326 ERCC6L2Q5T890 1561 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 DSTQ03001 7570 aaKnown RBP0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 ASXL3Q9C0F0 2248 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 TRAV22A0A0B4J277 110 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 FAM24AA6NFZ4 105 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 CHKB-CPT1BH3BT56 60 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 UQCR11O14957 56 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 COX17Q14061 63 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 IER3IP1Q9Y5U9 82 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 LRRC37A2A6NM11 1700 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 BIVM-ERCC5R4GMW8 1640 aa0.12□□□□□ -2.39
CBX3P9-201ENST00000402326 KDM5AP29375 1690 aaKnown RBP0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 ARHGEF5Q12774 1597 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 PZPP20742 1482 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 APOC3P02656 99 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 GNG11P61952 73 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 Q6JHZ5 121 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 SVBPQ8N300 66 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 TMEM203Q969S6 136 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 LINC01558Q9Y6Z2 57 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 CACNA1CQ13936 2221 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 F8P00451 2351 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 C10orf71Q711Q0 1435 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 TET3O43151 1660 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 MYOM1P52179 1685 aa0.11□□□□□ -2.39
CBX3P9-201ENST00000402326 SBF2Q86WG5 1849 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 CELSR2Q9HCU4 2923 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 M0R3E3 92 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 SFT2D2O95562 160 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 CFDP00746 253 aaPredicted RBP0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 IFITM1P13164 125 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 ATP5EP56381 51 aaPredicted RBP0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 SPCS1Q9Y6A9 102 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 U3KQA8 63 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 SCAPERQ9BY12 1400 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 NEBP20929 6669 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 IGSF10Q6WRI0 2623 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 NRKQ7Z2Y5 1582 aa0.1□□□□□ -2.39
CBX3P9-201ENST00000402326 BTAF1O14981 1849 aa0.09□□□□□ -2.39
CBX3P9-201ENST00000402326 LOC285095A0A1B0GVY8 99 aa0.09□□□□□ -2.4
CBX3P9-201ENST00000402326 SFTA2Q6UW10 78 aa0.09□□□□□ -2.4
CBX3P9-201ENST00000402326 MANBALQ9NQG1 85 aa0.09□□□□□ -2.4
CBX3P9-201ENST00000402326 UQCR10Q9UDW1 63 aa0.09□□□□□ -2.4
CBX3P9-201ENST00000402326 NCOA3Q9Y6Q9 1424 aa0.09□□□□□ -2.4
CBX3P9-201ENST00000402326 CC2D2AQ9P2K1 1620 aa0.09□□□□□ -2.4
CBX3P9-201ENST00000402326 NCOR2Q9Y618 2525 aa0.09□□□□□ -2.4
CBX3P9-201ENST00000402326 AHCTF1Q8WYP5 2266 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 S100A3P33764 101 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 MRPS10P82664 201 aaKnown RBP0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 Q0VG73 95 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 FAM223AQ8IWN6 122 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 Q8IZM0 81 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 TP53AIP1Q9HCN2 124 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 CDC42SE2Q9NRR3 84 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 TCHHQ07283 1943 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 NHSL1Q5SYE7 1610 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 WDR7Q9Y4E6 1490 aa0.08□□□□□ -2.4
CBX3P9-201ENST00000402326 FAM208BQ5VWN6 2430 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 FXYD6-FXYD2A0A087WZ82 144 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 I3L2K1 104 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 IGLC1P0CG04 106 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 SNCAP37840 140 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 DCDP81605 110 aaKnown RBP0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 WFDC2Q14508 124 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 FAM167A-AS1Q96KT0 104 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 NXT2Q9NPJ8 142 aaKnown RBP0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 ARL2-SNX15V9GYD0 113 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 SPHKAPQ2M3C7 1700 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 OTOGQ6ZRI0 2925 aa0.07□□□□□ -2.4
CBX3P9-201ENST00000402326 DMBT1Q9UGM3 2413 aaPredicted RBP0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 TOP2BQ02880 1626 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 NSD3Q9BZ95 1437 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 SCN7AQ01118 1682 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 MGPP08493 103 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 GTF2H5Q6ZYL4 71 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 FAIMQ9NVQ4 179 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 HMGXB3Q12766 1538 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 ARHGAP5Q13017 1502 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 EHBP1L1Q8N3D4 1523 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 FAM135AQ9P2D6 1515 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 PEG3Q9GZU2 1588 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 MUC12Q9UKN1 5478 aa0.06□□□□□ -2.4
CBX3P9-201ENST00000402326 PAPPAQ13219 1627 aa0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 RAPGEF6Q8TEU7 1601 aa0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 PPRC1Q5VV67 1664 aaKnown RBP0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 HRNRQ86YZ3 2850 aaPredicted RBP0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 SHANK2Q9UPX8 1470 aa0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 MAPKBP1O60336 1514 aa0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 ARHGEF12Q9NZN5 1544 aa0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 C20orf202A1L168 122 aa0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 NAP1L6A6NFF2 107 aa0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 C10orf142B7Z368 130 aa0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 UBE2D3P61077 147 aa0.05□□□□□ -2.4
CBX3P9-201ENST00000402326 UBE2D2P62837 147 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms