RNA–Protein interactions for RNA: ENST00000401004.2

HIST2H3DP1-201, Transcript of histone cluster 2 H3 family member d pseudogene 1, humanhuman

BASIC

Gene HIST2H3DP1, Length 416 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3DP1-201ENST00000401004 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 MRPL51Q4U2R6 128 aaKnown RBP11.3□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 MRPL54Q6P161 138 aaKnown RBP11.3□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 CKS2P33552 79 aa11.29□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 HBBP68871 147 aa11.29□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 MRPL52Q86TS9 123 aaKnown RBP11.29□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 NRACQ8N912 160 aa11.29□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 XCL1P47992 114 aa11.28□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 SS18Q15532 418 aa11.28□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 ZNF664Q8N3J9 261 aa11.28□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 C15orf56Q8N910 161 aa11.28□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 TMEM18Q96B42 140 aa11.28□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 C20orf78Q9BR46 151 aa11.28□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 SRRM2Q9UQ35 2752 aaKnown RBP11.28□□□□□ -0.6
HIST2H3DP1-201ENST00000401004 LINC00959A0A1B0GUT2 108 aa11.27□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 SDIM1Q6ZPB5 146 aa11.27□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 CDC42SE2Q9NRR3 84 aa11.27□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 TCAPO15273 167 aa11.26□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 CCL25O15444 150 aa11.26□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 PNRC1Q12796 327 aaPredicted RBP11.26□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 DPH3Q96FX2 82 aa11.26□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 TRBV24-1A0A075B6N3 115 aa11.25□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 FOXI1Q12951 378 aa11.25□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 ATP5L2Q7Z4Y8 100 aa11.25□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.25□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 D6R8Y8 96 aa11.24□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 TNFRSF6BO95407 300 aa11.24□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 PPBPP02775 128 aa11.24□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 CSDC2Q9Y534 153 aaKnown RBP11.24□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 GVQW2A0A096LPI5 108 aaPredicted RBP11.23□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 A0A1B0GXF2 115 aa11.23□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 MT-ND4LP03901 98 aa11.23□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 SLPIP03973 132 aa11.23□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 CD164L2Q6UWJ8 174 aa11.23□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 UBE2D4Q9Y2X8 147 aa11.23□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 IGHV1-58A0A0C4DH39 117 aa11.22□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 RPL37AP61513 92 aaKnown RBP11.22□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 ANAPC16Q96DE5 110 aa11.22□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 SMIM2Q9BVW6 85 aa11.22□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 C1orf196B1AJZ1 125 aa11.21□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 J3QL48 77 aa11.21□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 PHOX2AO14813 284 aa11.21□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 ORMDL3Q8N138 153 aa11.21□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.61
HIST2H3DP1-201ENST00000401004 PANO1I0J062 215 aa11.2□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 MALP21145 153 aa11.2□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 CIRBPQ14011 172 aaKnown RBP11.2□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 CLLU1Q5K131 121 aa11.2□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 TIMM21Q9BVV7 248 aa11.2□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 ZNF561-AS1K7EIQ3 104 aa11.19□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 NPYP01303 97 aa11.19□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 COX6A2Q02221 97 aa11.19□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 TMEM136Q6ZRR5 245 aa11.19□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 FLG2Q5D862 2391 aaPredicted RBP11.18□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 TRAV13-1A0A0B4J241 112 aa11.18□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 RAB5AP20339 215 aa11.18□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 SPACA4Q8TDM5 124 aa11.18□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 PRELID3AQ96N28 172 aa11.18□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 COX7A2LO14548 114 aa11.17□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 CHTF8P0CG12 524 aa11.17□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 Q6ZUT4 128 aa11.17□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 SPANXA1Q9NS26 97 aa11.17□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 MYCBP2O75592 4640 aa11.16□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 A0A087WYN8 130 aa11.16□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 CARD19Q96LW7 228 aa11.16□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 DMBT1Q9UGM3 2413 aaPredicted RBP11.16□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 IGKV2-24A0A0C4DH68 120 aa11.15□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 KRTAP10-4P60372 401 aaPredicted RBP11.15□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 LAMTOR2Q9Y2Q5 125 aa11.15□□□□□ -0.62
HIST2H3DP1-201ENST00000401004 APOMO95445 188 aa11.14□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 MAJINQ3KP22 176 aa11.14□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 UQCC3Q6UW78 93 aa11.14□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 PRSS3P2Q8NHM4 247 aa11.14□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 LINC00474Q9P2X8 69 aa11.14□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 KRTAP29-1A8MX34 341 aaPredicted RBP11.13□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 IFI27P40305 119 aaPredicted RBP11.13□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 SYCNQ0VAF6 134 aa11.13□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 MRPS36P82909 103 aaKnown RBP11.12□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 C7orf33Q8WU49 177 aa11.12□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 PLAC8Q9NZF1 115 aa11.12□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 LOC389332A0A1B0GUA5 103 aa11.11□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 HERC1Q15751 4861 aa11.1□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 IFITM10A6NMD0 228 aa11.1□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 STPG4Q8N801 248 aa11.1□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 IMMP2LQ96T52 175 aa11.1□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 A0A096LNI7 61 aa11.09□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 PRSS47A8MTI9 375 aa11.09□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
HIST2H3DP1-201ENST00000401004 TMEM218A2RU14 115 aa11.08□□□□□ -0.64
HIST2H3DP1-201ENST00000401004 OXTP01178 125 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms