RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 TIMM17BO60830 172 aa16.57■□□□□ 0.24
RABGGTA-202ENST00000399409 FAM110AQ9BQ89 295 aa16.57■□□□□ 0.24
RABGGTA-202ENST00000399409 SMAGPQ0VAQ4 97 aa16.56■□□□□ 0.24
RABGGTA-202ENST00000399409 MIAQ16674 131 aa16.56■□□□□ 0.24
RABGGTA-202ENST00000399409 YAE1D1Q9NRH1 226 aa16.56■□□□□ 0.24
RABGGTA-202ENST00000399409 CSDC2Q9Y534 153 aaKnown RBP16.56■□□□□ 0.24
RABGGTA-202ENST00000399409 KRTAP1-1Q07627 177 aa16.55■□□□□ 0.24
RABGGTA-202ENST00000399409 Q6ZTI0 123 aa16.55■□□□□ 0.24
RABGGTA-202ENST00000399409 RNF183Q96D59 192 aa16.55■□□□□ 0.24
RABGGTA-202ENST00000399409 FAM19A3Q7Z5A8 133 aa16.54■□□□□ 0.24
RABGGTA-202ENST00000399409 APCP25054 2843 aa16.54■□□□□ 0.24
RABGGTA-202ENST00000399409 PRSS2P07478 247 aa16.54■□□□□ 0.24
RABGGTA-202ENST00000399409 INSL3P51460 131 aa16.54■□□□□ 0.24
RABGGTA-202ENST00000399409 HERVK_113P63121 156 aa16.54■□□□□ 0.24
RABGGTA-202ENST00000399409 CDKN2A-AS1Q9UH64 79 aa16.54■□□□□ 0.24
RABGGTA-202ENST00000399409 TEN1Q86WV5 123 aa16.53■□□□□ 0.24
RABGGTA-202ENST00000399409 ADAMTSL4-AS1Q5T5F5 129 aa16.53■□□□□ 0.24
RABGGTA-202ENST00000399409 M0QXV9 152 aa16.52■□□□□ 0.24
RABGGTA-202ENST00000399409 NDUFA1O15239 70 aa16.52■□□□□ 0.24
RABGGTA-202ENST00000399409 PPDPFLQ8WWR9 84 aa16.52■□□□□ 0.24
RABGGTA-202ENST00000399409 C16orf74Q96GX8 76 aa16.52■□□□□ 0.24
RABGGTA-202ENST00000399409 ITPR3Q14573 2671 aa16.52■□□□□ 0.24
RABGGTA-202ENST00000399409 CHD6Q8TD26 2715 aa16.52■□□□□ 0.23
RABGGTA-202ENST00000399409 SCGB1A1P11684 91 aa16.52■□□□□ 0.23
RABGGTA-202ENST00000399409 IFITM1P13164 125 aa16.52■□□□□ 0.23
RABGGTA-202ENST00000399409 Q1RN00 199 aa16.52■□□□□ 0.23
RABGGTA-202ENST00000399409 CIDEAO60543 219 aa16.51■□□□□ 0.23
RABGGTA-202ENST00000399409 TMEM101Q96IK0 257 aa16.51■□□□□ 0.23
RABGGTA-202ENST00000399409 TRBV30A0A0K0K1B3 111 aa16.5■□□□□ 0.23
RABGGTA-202ENST00000399409 A8MZ25 164 aa16.5■□□□□ 0.23
RABGGTA-202ENST00000399409 H7C2G1 150 aa16.5■□□□□ 0.23
RABGGTA-202ENST00000399409 IGLV1-51P01701 117 aa16.5■□□□□ 0.23
RABGGTA-202ENST00000399409 GIG44P09565 113 aaPredicted RBP16.5■□□□□ 0.23
RABGGTA-202ENST00000399409 NOP10Q9NPE3 64 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-202ENST00000399409 IGLV5-39A0A0G2JS06 123 aa16.49■□□□□ 0.23
RABGGTA-202ENST00000399409 LINC00242Q5T6M2 205 aa16.49■□□□□ 0.23
RABGGTA-202ENST00000399409 NTM-AS1Q6ZSK4 140 aa16.48■□□□□ 0.23
RABGGTA-202ENST00000399409 GTSF1LQ9H1H1 148 aa16.48■□□□□ 0.23
RABGGTA-202ENST00000399409 LINC00694P0DN24 101 aa16.48■□□□□ 0.23
RABGGTA-202ENST00000399409 ATXN8Q156A1 80 aa16.48■□□□□ 0.23
RABGGTA-202ENST00000399409 COX6A2Q02221 97 aa16.47■□□□□ 0.23
RABGGTA-202ENST00000399409 CIRBPQ14011 172 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-202ENST00000399409 GAGE12JA6NER3 117 aa16.47■□□□□ 0.23
RABGGTA-202ENST00000399409 GAGE4Q13068 117 aa16.47■□□□□ 0.23
RABGGTA-202ENST00000399409 GAGE5Q13069 117 aa16.47■□□□□ 0.23
RABGGTA-202ENST00000399409 HIST2H2BCQ6DN03 193 aa16.47■□□□□ 0.23
RABGGTA-202ENST00000399409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.47■□□□□ 0.23
RABGGTA-202ENST00000399409 C19orf73Q9NVV2 129 aa16.47■□□□□ 0.23
RABGGTA-202ENST00000399409 TLN2Q9Y4G6 2542 aa16.46■□□□□ 0.22
RABGGTA-202ENST00000399409 SLC25A20O43772 301 aa16.45■□□□□ 0.22
RABGGTA-202ENST00000399409 CARD19Q96LW7 228 aa16.45■□□□□ 0.22
RABGGTA-202ENST00000399409 KMT2BQ9UMN6 2715 aaPredicted RBP16.45■□□□□ 0.22
RABGGTA-202ENST00000399409 PLAC8L1A1L4L8 177 aa16.45■□□□□ 0.22
RABGGTA-202ENST00000399409 OVOL2Q9BRP0 275 aa16.45■□□□□ 0.22
RABGGTA-202ENST00000399409 C9JAW5 83 aa16.44■□□□□ 0.22
RABGGTA-202ENST00000399409 CDC42SE2Q9NRR3 84 aa16.44■□□□□ 0.22
RABGGTA-202ENST00000399409 NDUFA7O95182 113 aa16.44■□□□□ 0.22
RABGGTA-202ENST00000399409 TRBV6-4A0A1B0GX49 114 aa16.43■□□□□ 0.22
RABGGTA-202ENST00000399409 RPL35AP18077 110 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-202ENST00000399409 ANKRD29Q8N6D5 301 aa16.43■□□□□ 0.22
RABGGTA-202ENST00000399409 TMEM243Q9BU79 118 aa16.43■□□□□ 0.22
RABGGTA-202ENST00000399409 TRGV2A0A075B6R0 118 aa16.43■□□□□ 0.22
RABGGTA-202ENST00000399409 H7C423 109 aa16.43■□□□□ 0.22
RABGGTA-202ENST00000399409 TRIAP1O43715 76 aa16.43■□□□□ 0.22
RABGGTA-202ENST00000399409 LINC01600Q96MT4 127 aa16.43■□□□□ 0.22
RABGGTA-202ENST00000399409 ICOSQ9Y6W8 199 aa16.43■□□□□ 0.22
RABGGTA-202ENST00000399409 SONP18583 2426 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 HILS1P60008 231 aa16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 CSNK1G2-AS1Q8NCQ2 148 aa16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 UBE2L6O14933 153 aa16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 GAGE7O76087 117 aa16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 GAGE12FP0CL80 117 aa16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 GAGE12GP0CL81 117 aa16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 GAGE12IP0CL82 117 aa16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 LINC01620Q4KN68 170 aa16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 WFDC10AQ9H1F0 79 aa16.42■□□□□ 0.22
RABGGTA-202ENST00000399409 AKAP9Q99996 3911 aa16.41■□□□□ 0.22
RABGGTA-202ENST00000399409 SMIM1B2RUZ4 78 aa16.41■□□□□ 0.22
RABGGTA-202ENST00000399409 COX6CP09669 75 aa16.41■□□□□ 0.22
RABGGTA-202ENST00000399409 TRAV13-1A0A0B4J241 112 aa16.4■□□□□ 0.22
RABGGTA-202ENST00000399409 COPS9Q8WXC6 57 aa16.4■□□□□ 0.22
RABGGTA-202ENST00000399409 Q9H8V8 135 aa16.4■□□□□ 0.22
RABGGTA-202ENST00000399409 WNK1Q9H4A3 2382 aa16.39■□□□□ 0.21
RABGGTA-202ENST00000399409 NPC2P61916 151 aa16.39■□□□□ 0.21
RABGGTA-202ENST00000399409 CDIP1Q9H305 208 aa16.38■□□□□ 0.21
RABGGTA-202ENST00000399409 FLNAP21333 2647 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-202ENST00000399409 TRGV4A0A0C4DH28 118 aa16.36■□□□□ 0.21
RABGGTA-202ENST00000399409 F5H768 121 aa16.36■□□□□ 0.21
RABGGTA-202ENST00000399409 TRBV10-2A0A0K0K1G8 114 aa16.36■□□□□ 0.21
RABGGTA-202ENST00000399409 HERV-K104P63124 156 aa16.36■□□□□ 0.21
RABGGTA-202ENST00000399409 LINC00308Q8TCZ7 52 aa16.36■□□□□ 0.21
RABGGTA-202ENST00000399409 RPL13AP40429 203 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-202ENST00000399409 DAND5Q8N907 189 aa16.34■□□□□ 0.21
RABGGTA-202ENST00000399409 ZNF625Q96I27 306 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-202ENST00000399409 J3QKU1 62 aa16.34■□□□□ 0.21
RABGGTA-202ENST00000399409 ZNF469Q96JG9 3925 aaPredicted RBP16.33■□□□□ 0.21
RABGGTA-202ENST00000399409 TMEM262E9PQX1 116 aa16.33■□□□□ 0.2
RABGGTA-202ENST00000399409 PLA2G2AP14555 144 aa16.33■□□□□ 0.2
RABGGTA-202ENST00000399409 PRIMA1Q86XR5 153 aa16.33■□□□□ 0.2
RABGGTA-202ENST00000399409 PPDPFQ9H3Y8 114 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms