RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 DEFB131AP59861 70 aa10.12□□□□□ -0.79
APOB-202ENST00000399256 SMCR5Q8TEV8 140 aa10.12□□□□□ -0.79
APOB-202ENST00000399256 DGAT2L7PQ6IED9 249 aa10.11□□□□□ -0.79
APOB-202ENST00000399256 CREBBPQ92793 2442 aa10.11□□□□□ -0.79
APOB-202ENST00000399256 IGHV4-30-2A0A087WSY4 118 aa10.11□□□□□ -0.79
APOB-202ENST00000399256 COX7A2LO14548 114 aa10.11□□□□□ -0.79
APOB-202ENST00000399256 CSPG4Q6UVK1 2322 aa10.11□□□□□ -0.79
APOB-202ENST00000399256 RBMY1BA6NDE4 496 aaKnown RBP10.11□□□□□ -0.79
APOB-202ENST00000399256 RBMY1EA6NEQ0 496 aaKnown RBP10.11□□□□□ -0.79
APOB-202ENST00000399256 RBMY1DP0C7P1 496 aaKnown RBP10.11□□□□□ -0.79
APOB-202ENST00000399256 C10orf105Q8TEF2 133 aa10.11□□□□□ -0.79
APOB-202ENST00000399256 SOSTDC1Q6X4U4 206 aa10.1□□□□□ -0.79
APOB-202ENST00000399256 NDUFA7O95182 113 aa10.1□□□□□ -0.79
APOB-202ENST00000399256 MSMBP08118 114 aa10.1□□□□□ -0.79
APOB-202ENST00000399256 HOXD3P31249 432 aaPredicted RBP10.1□□□□□ -0.79
APOB-202ENST00000399256 LINC01587Q99440 93 aa10.1□□□□□ -0.79
APOB-202ENST00000399256 ZNF415Q09FC8 603 aa10.09□□□□□ -0.79
APOB-202ENST00000399256 IGHV3OR16-12A0A075B7B8 117 aa10.09□□□□□ -0.79
APOB-202ENST00000399256 PLA2G2AP14555 144 aa10.09□□□□□ -0.79
APOB-202ENST00000399256 TIRAPP58753 221 aa10.09□□□□□ -0.79
APOB-202ENST00000399256 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
APOB-202ENST00000399256 DAZ4Q86SG3 579 aaKnown RBP10.09□□□□□ -0.79
APOB-202ENST00000399256 RNF152Q8N8N0 203 aa10.09□□□□□ -0.79
APOB-202ENST00000399256 DAZ3Q9NR90 486 aaKnown RBP10.09□□□□□ -0.79
APOB-202ENST00000399256 IGLV5-45A0A087WSX0 123 aa10.09□□□□□ -0.79
APOB-202ENST00000399256 CCL19Q99731 98 aa10.09□□□□□ -0.79
APOB-202ENST00000399256 SPG11Q96JI7 2443 aa10.08□□□□□ -0.8
APOB-202ENST00000399256 DEFB112Q30KQ8 113 aa10.08□□□□□ -0.8
APOB-202ENST00000399256 ACYP1P07311 99 aa10.07□□□□□ -0.8
APOB-202ENST00000399256 LINC00242Q5T6M2 205 aa10.07□□□□□ -0.8
APOB-202ENST00000399256 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
APOB-202ENST00000399256 CELSR2Q9HCU4 2923 aa10.07□□□□□ -0.8
APOB-202ENST00000399256 TRAV13-1A0A0B4J241 112 aa10.07□□□□□ -0.8
APOB-202ENST00000399256 BAALC-AS2P0C853 105 aa10.07□□□□□ -0.8
APOB-202ENST00000399256 ATP5J2P56134 94 aa10.07□□□□□ -0.8
APOB-202ENST00000399256 DEFB136Q30KP8 78 aa10.07□□□□□ -0.8
APOB-202ENST00000399256 TENM4Q6N022 2769 aa10.06□□□□□ -0.8
APOB-202ENST00000399256 IGLV5-39A0A0G2JS06 123 aa10.06□□□□□ -0.8
APOB-202ENST00000399256 LINC00694P0DN24 101 aa10.06□□□□□ -0.8
APOB-202ENST00000399256 PRIMA1Q86XR5 153 aa10.06□□□□□ -0.8
APOB-202ENST00000399256 FAM218AQ96MZ4 157 aa10.06□□□□□ -0.8
APOB-202ENST00000399256 SMIM1B2RUZ4 78 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 J3QKU1 62 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 SLURP1P55000 103 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 HERVK_113P63121 156 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 USP9YO00507 2555 aaPredicted RBP10.05□□□□□ -0.8
APOB-202ENST00000399256 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 FBN2P35556 2912 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 PIK3CD-AS1Q5SR53 167 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 C18orf65Q6ZTR6 163 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 LINC00643Q86TS7 51 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 C11orf72Q8NBR9 251 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 NRGNQ92686 78 aa10.05□□□□□ -0.8
APOB-202ENST00000399256 TMEM89A2RUT3 159 aa10.04□□□□□ -0.8
APOB-202ENST00000399256 BEAN1Q3B7T3 259 aa10.04□□□□□ -0.8
APOB-202ENST00000399256 IMUPQ9GZP8 106 aa10.04□□□□□ -0.8
APOB-202ENST00000399256 C9orf153Q5TBE3 101 aa10.04□□□□□ -0.8
APOB-202ENST00000399256 TMEM126AQ9H061 195 aa10.04□□□□□ -0.8
APOB-202ENST00000399256 Q9HAA7 133 aa10.04□□□□□ -0.8
APOB-202ENST00000399256 C22orf24Q9Y442 160 aa10.03□□□□□ -0.8
APOB-202ENST00000399256 TRACP01848 142 aa10.02□□□□□ -0.8
APOB-202ENST00000399256 GAGE2AQ6NT46 116 aa10.02□□□□□ -0.8
APOB-202ENST00000399256 RS1O15537 224 aa10.02□□□□□ -0.81
APOB-202ENST00000399256 COPS9Q8WXC6 57 aa10.01□□□□□ -0.81
APOB-202ENST00000399256 C3orf22Q8N5N4 141 aa10.01□□□□□ -0.81
APOB-202ENST00000399256 B4DSR2 109 aa10□□□□□ -0.81
APOB-202ENST00000399256 PPDPFQ9H3Y8 114 aa10□□□□□ -0.81
APOB-202ENST00000399256 A8MTW9 85 aa10□□□□□ -0.81
APOB-202ENST00000399256 CSMD2Q7Z408 3487 aa10□□□□□ -0.81
APOB-202ENST00000399256 NBPF19A0A087WUL8 3843 aa10□□□□□ -0.81
APOB-202ENST00000399256 HIST2H2BDQ6DRA6 164 aa10□□□□□ -0.81
APOB-202ENST00000399256 VPREB3Q9UKI3 123 aa10□□□□□ -0.81
APOB-202ENST00000399256 KRTAP10-9P60411 292 aa9.99□□□□□ -0.81
APOB-202ENST00000399256 UBE2E2Q96LR5 201 aa9.99□□□□□ -0.81
APOB-202ENST00000399256 MAP6D1Q9H9H5 199 aa9.99□□□□□ -0.81
APOB-202ENST00000399256 PEMTQ9UBM1 199 aa9.99□□□□□ -0.81
APOB-202ENST00000399256 CENPEQ02224 2701 aa9.99□□□□□ -0.81
APOB-202ENST00000399256 XCL2Q9UBD3 114 aa9.99□□□□□ -0.81
APOB-202ENST00000399256 HELZ2Q9BYK8 2649 aaKnown RBP9.99□□□□□ -0.81
APOB-202ENST00000399256 F5H768 121 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 INSP01308 110 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 CFAP161Q6P656 301 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 TRGV1A0A0A0MS02 117 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 KLK5Q9Y337 293 aaPredicted RBP9.98□□□□□ -0.81
APOB-202ENST00000399256 PTPN13Q12923 2485 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 MALP21145 153 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 MAPK1IP1LQ8NDC0 245 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 Q96MF0 132 aa9.98□□□□□ -0.81
APOB-202ENST00000399256 UQCRQO14949 82 aa9.97□□□□□ -0.81
APOB-202ENST00000399256 HIST2H2BCQ6DN03 193 aa9.97□□□□□ -0.81
APOB-202ENST00000399256 ZNF702PQ9H963 129 aa9.97□□□□□ -0.81
APOB-202ENST00000399256 INAFM2P0DMQ5 153 aa9.96□□□□□ -0.81
APOB-202ENST00000399256 CRPP02741 224 aa9.96□□□□□ -0.82
APOB-202ENST00000399256 C5orf38Q86SI9 138 aa9.96□□□□□ -0.82
APOB-202ENST00000399256 LINC00337Q8N6G1 96 aa9.96□□□□□ -0.82
APOB-202ENST00000399256 ANKRD17O75179 2603 aaKnown RBP9.96□□□□□ -0.82
APOB-202ENST00000399256 POLQO75417 2590 aa9.96□□□□□ -0.82
APOB-202ENST00000399256 C9orf129Q5T035 196 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms