RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 DGAT2L7PQ6IED9 249 aa18.85■□□□□ 0.61
CPNE1-203ENST00000397442 CST9LQ9H4G1 147 aa18.85■□□□□ 0.61
CPNE1-203ENST00000397442 A0A087WX48 190 aa18.85■□□□□ 0.61
CPNE1-203ENST00000397442 SMAGPQ0VAQ4 97 aa18.85■□□□□ 0.61
CPNE1-203ENST00000397442 CDC42SE2Q9NRR3 84 aa18.85■□□□□ 0.61
CPNE1-203ENST00000397442 DNAH7Q8WXX0 4024 aa18.84■□□□□ 0.61
CPNE1-203ENST00000397442 OR5A1Q8NGJ0 315 aa18.84■□□□□ 0.61
CPNE1-203ENST00000397442 IGLV4-60A0A075B6I1 120 aa18.83■□□□□ 0.61
CPNE1-203ENST00000397442 MPV17L2Q567V2 206 aa18.83■□□□□ 0.61
CPNE1-203ENST00000397442 PAPPA-AS1Q5QFB9 102 aa18.83■□□□□ 0.61
CPNE1-203ENST00000397442 VCX2Q9H322 139 aa18.83■□□□□ 0.61
CPNE1-203ENST00000397442 CSMD3Q7Z407 3707 aa18.83■□□□□ 0.6
CPNE1-203ENST00000397442 C20orf202A1L168 122 aa18.82■□□□□ 0.6
CPNE1-203ENST00000397442 DYNC2H1Q8NCM8 4307 aaKnown RBP18.82■□□□□ 0.6
CPNE1-203ENST00000397442 A0A1B0GUV1 79 aa18.82■□□□□ 0.6
CPNE1-203ENST00000397442 TMEM262E9PQX1 116 aa18.82■□□□□ 0.6
CPNE1-203ENST00000397442 ZNF664Q8N3J9 261 aa18.82■□□□□ 0.6
CPNE1-203ENST00000397442 Q8N3U1 123 aa18.82■□□□□ 0.6
CPNE1-203ENST00000397442 TMEM101Q96IK0 257 aa18.82■□□□□ 0.6
CPNE1-203ENST00000397442 MRPL35Q9NZE8 188 aaKnown RBP18.82■□□□□ 0.6
CPNE1-203ENST00000397442 RBX1P62877 108 aa18.81■□□□□ 0.6
CPNE1-203ENST00000397442 TGP01266 2768 aa18.8■□□□□ 0.6
CPNE1-203ENST00000397442 NUPR2A6NF83 97 aa18.8■□□□□ 0.6
CPNE1-203ENST00000397442 TEX43Q6ZNM6 134 aa18.8■□□□□ 0.6
CPNE1-203ENST00000397442 CHTOPQ9Y3Y2 248 aaKnown RBP18.8■□□□□ 0.6
CPNE1-203ENST00000397442 ATOH7Q8N100 152 aa18.79■□□□□ 0.6
CPNE1-203ENST00000397442 APLNQ9ULZ1 77 aa18.79■□□□□ 0.6
CPNE1-203ENST00000397442 TRAV8-6A0A0B4J262 113 aa18.79■□□□□ 0.6
CPNE1-203ENST00000397442 F8VRH5 84 aa18.79■□□□□ 0.6
CPNE1-203ENST00000397442 WFDC10BQ8IUB3 73 aa18.79■□□□□ 0.6
CPNE1-203ENST00000397442 LINC00518Q8N0U6 118 aa18.78■□□□□ 0.6
CPNE1-203ENST00000397442 IGLV4-69A0A075B6H9 119 aa18.77■□□□□ 0.6
CPNE1-203ENST00000397442 LINC00588Q9Y4M8 146 aa18.76■□□□□ 0.59
CPNE1-203ENST00000397442 C12orf57Q99622 126 aa18.76■□□□□ 0.59
CPNE1-203ENST00000397442 PKIAP61925 76 aa18.74■□□□□ 0.59
CPNE1-203ENST00000397442 KLK5Q9Y337 293 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-203ENST00000397442 DPM2O94777 84 aa18.73■□□□□ 0.59
CPNE1-203ENST00000397442 IGKCP01834 107 aa18.73■□□□□ 0.59
CPNE1-203ENST00000397442 UBE2D1P51668 147 aa18.73■□□□□ 0.59
CPNE1-203ENST00000397442 CCL18P55774 89 aa18.73■□□□□ 0.59
CPNE1-203ENST00000397442 C2orf88Q9BSF0 95 aa18.73■□□□□ 0.59
CPNE1-203ENST00000397442 MRPS16Q9Y3D3 137 aaKnown RBP18.73■□□□□ 0.59
CPNE1-203ENST00000397442 A0A0J9YXV3 536 aa18.71■□□□□ 0.59
CPNE1-203ENST00000397442 PLNP26678 52 aa18.71■□□□□ 0.59
CPNE1-203ENST00000397442 MAJINQ3KP22 176 aa18.71■□□□□ 0.59
CPNE1-203ENST00000397442 C11orf86A6NJI1 115 aa18.7■□□□□ 0.58
CPNE1-203ENST00000397442 IGLC3P0DOY3 106 aa18.7■□□□□ 0.58
CPNE1-203ENST00000397442 NFE4Q86UQ8 179 aa18.69■□□□□ 0.58
CPNE1-203ENST00000397442 TRAV13-1A0A0B4J241 112 aa18.68■□□□□ 0.58
CPNE1-203ENST00000397442 ANGP03950 147 aaKnown RBP18.68■□□□□ 0.58
CPNE1-203ENST00000397442 ZFAND6Q6FIF0 208 aa18.68■□□□□ 0.58
CPNE1-203ENST00000397442 STARD9Q9P2P6 4700 aa18.68■□□□□ 0.58
CPNE1-203ENST00000397442 hDV102S1A0JD36 115 aa18.67■□□□□ 0.58
CPNE1-203ENST00000397442 IGHV3-30P01768 117 aa18.67■□□□□ 0.58
CPNE1-203ENST00000397442 IGHV3-33P01772 117 aa18.67■□□□□ 0.58
CPNE1-203ENST00000397442 IGHV3-30-3P0DP02 117 aa18.67■□□□□ 0.58
CPNE1-203ENST00000397442 IGHV3-30-5P0DP03 117 aa18.67■□□□□ 0.58
CPNE1-203ENST00000397442 TCTAP57738 103 aa18.67■□□□□ 0.58
CPNE1-203ENST00000397442 FAM19A3Q7Z5A8 133 aa18.67■□□□□ 0.58
CPNE1-203ENST00000397442 LINC00269Q8N2A0 174 aa18.67■□□□□ 0.58
CPNE1-203ENST00000397442 MUC7Q8TAX7 377 aa18.67■□□□□ 0.58
CPNE1-203ENST00000397442 TRAV9-2A0A087WT02 112 aa18.66■□□□□ 0.58
CPNE1-203ENST00000397442 UPK3BQ9BT76 320 aa18.66■□□□□ 0.58
CPNE1-203ENST00000397442 CHAC1Q9BUX1 264 aa18.66■□□□□ 0.58
CPNE1-203ENST00000397442 LINC01556Q5JQF7 62 aa18.66■□□□□ 0.58
CPNE1-203ENST00000397442 LINC00242Q5T6M2 205 aa18.66■□□□□ 0.58
CPNE1-203ENST00000397442 IGKV3OR2-268A0A0C4DH90 116 aa18.65■□□□□ 0.58
CPNE1-203ENST00000397442 TINCRA0A1B0GVN0 87 aa18.65■□□□□ 0.58
CPNE1-203ENST00000397442 CLPSL2Q6UWE3 100 aa18.65■□□□□ 0.58
CPNE1-203ENST00000397442 WWC2-AS2Q96NR7 200 aa18.65■□□□□ 0.58
CPNE1-203ENST00000397442 VAMP8Q9BV40 100 aa18.65■□□□□ 0.58
CPNE1-203ENST00000397442 DNAH10OSP0CZ25 163 aa18.64■□□□□ 0.57
CPNE1-203ENST00000397442 STPG4Q8N801 248 aa18.64■□□□□ 0.57
CPNE1-203ENST00000397442 KLK12Q9UKR0 248 aa18.63■□□□□ 0.57
CPNE1-203ENST00000397442 PLECQ15149 4684 aaKnown RBP18.63■□□□□ 0.57
CPNE1-203ENST00000397442 LINC00959A0A1B0GUT2 108 aa18.63■□□□□ 0.57
CPNE1-203ENST00000397442 S100A12P80511 92 aa18.63■□□□□ 0.57
CPNE1-203ENST00000397442 REG3AQ06141 175 aa18.63■□□□□ 0.57
CPNE1-203ENST00000397442 PRR34Q9NV39 138 aa18.63■□□□□ 0.57
CPNE1-203ENST00000397442 PAM16Q9Y3D7 125 aa18.63■□□□□ 0.57
CPNE1-203ENST00000397442 TENM2Q9NT68 2774 aa18.62■□□□□ 0.57
CPNE1-203ENST00000397442 COX6A2Q02221 97 aa18.62■□□□□ 0.57
CPNE1-203ENST00000397442 SIVA1O15304 175 aa18.61■□□□□ 0.57
CPNE1-203ENST00000397442 ZNF22P17026 224 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-203ENST00000397442 IGLV5-45A0A087WSX0 123 aa18.59■□□□□ 0.57
CPNE1-203ENST00000397442 ANKRD39Q53RE8 183 aa18.59■□□□□ 0.57
CPNE1-203ENST00000397442 ENHOQ6UWT2 76 aa18.59■□□□□ 0.57
CPNE1-203ENST00000397442 SEC11AP67812 179 aa18.58■□□□□ 0.57
CPNE1-203ENST00000397442 TMEM170BQ5T4T1 132 aa18.58■□□□□ 0.57
CPNE1-203ENST00000397442 GEMIN7Q9H840 131 aaKnown RBP18.58■□□□□ 0.57
CPNE1-203ENST00000397442 LYSTQ99698 3801 aa18.58■□□□□ 0.56
CPNE1-203ENST00000397442 HERVK_113P63121 156 aa18.57■□□□□ 0.56
CPNE1-203ENST00000397442 SPATA45Q537H7 98 aa18.57■□□□□ 0.56
CPNE1-203ENST00000397442 HSBP1L1C9JCN9 74 aa18.57■□□□□ 0.56
CPNE1-203ENST00000397442 CDKN2A-AS1Q9UH64 79 aa18.57■□□□□ 0.56
CPNE1-203ENST00000397442 Q9H8V8 135 aa18.56■□□□□ 0.56
CPNE1-203ENST00000397442 SS18Q15532 418 aa18.55■□□□□ 0.56
CPNE1-203ENST00000397442 LINC00469Q8N7U9 141 aa18.55■□□□□ 0.56
CPNE1-203ENST00000397442 CCL25O15444 150 aa18.54■□□□□ 0.56
CPNE1-203ENST00000397442 UBE2DNLQ8IWF7 75 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms