RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 EDA2RQ9HAV5 297 aa13.27□□□□□ -0.28
IFFO1-204ENST00000396840 SPANXA1Q9NS26 97 aa13.27□□□□□ -0.29
IFFO1-204ENST00000396840 APCP25054 2843 aa13.27□□□□□ -0.29
IFFO1-204ENST00000396840 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
IFFO1-204ENST00000396840 Q96MF0 132 aa13.26□□□□□ -0.29
IFFO1-204ENST00000396840 NBPF19A0A087WUL8 3843 aa13.26□□□□□ -0.29
IFFO1-204ENST00000396840 COX6A2Q02221 97 aa13.26□□□□□ -0.29
IFFO1-204ENST00000396840 LINC01620Q4KN68 170 aa13.26□□□□□ -0.29
IFFO1-204ENST00000396840 C4orf3Q8WVX3 66 aa13.26□□□□□ -0.29
IFFO1-204ENST00000396840 ITPR3Q14573 2671 aa13.26□□□□□ -0.29
IFFO1-204ENST00000396840 ATXN8Q156A1 80 aa13.26□□□□□ -0.29
IFFO1-204ENST00000396840 A8MTW9 85 aa13.25□□□□□ -0.29
IFFO1-204ENST00000396840 TEX49A0A1B0GTD5 131 aa13.25□□□□□ -0.29
IFFO1-204ENST00000396840 LINC00694P0DN24 101 aa13.25□□□□□ -0.29
IFFO1-204ENST00000396840 MIAQ16674 131 aa13.25□□□□□ -0.29
IFFO1-204ENST00000396840 CLEC2BQ92478 149 aa13.25□□□□□ -0.29
IFFO1-204ENST00000396840 UBR5O95071 2799 aaPredicted RBP13.24□□□□□ -0.29
IFFO1-204ENST00000396840 SETXQ7Z333 2677 aaKnown RBP13.24□□□□□ -0.29
IFFO1-204ENST00000396840 RNF183Q96D59 192 aa13.24□□□□□ -0.29
IFFO1-204ENST00000396840 BBC3Q96PG8 261 aaPredicted RBP13.24□□□□□ -0.29
IFFO1-204ENST00000396840 ICOSQ9Y6W8 199 aa13.24□□□□□ -0.29
IFFO1-204ENST00000396840 ODF3L2Q3SX64 289 aa13.24□□□□□ -0.29
IFFO1-204ENST00000396840 STHQ8IWL8 128 aa13.23□□□□□ -0.29
IFFO1-204ENST00000396840 TMEM101Q96IK0 257 aa13.23□□□□□ -0.29
IFFO1-204ENST00000396840 TRAV13-1A0A0B4J241 112 aa13.22□□□□□ -0.29
IFFO1-204ENST00000396840 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
IFFO1-204ENST00000396840 FLNAP21333 2647 aaKnown RBP13.22□□□□□ -0.29
IFFO1-204ENST00000396840 TRBV30A0A0K0K1B3 111 aa13.21□□□□□ -0.29
IFFO1-204ENST00000396840 RS1O15537 224 aa13.21□□□□□ -0.29
IFFO1-204ENST00000396840 SPANXDQ9BXN6 97 aa13.21□□□□□ -0.29
IFFO1-204ENST00000396840 SPANXCQ9NY87 97 aa13.21□□□□□ -0.29
IFFO1-204ENST00000396840 Q6ZTI0 123 aa13.21□□□□□ -0.3
IFFO1-204ENST00000396840 C1orf158Q8N1D5 194 aa13.21□□□□□ -0.3
IFFO1-204ENST00000396840 RPL13AP40429 203 aaKnown RBP13.2□□□□□ -0.3
IFFO1-204ENST00000396840 BEAN1Q3B7T3 259 aa13.2□□□□□ -0.3
IFFO1-204ENST00000396840 Q8N2B8 174 aa13.2□□□□□ -0.3
IFFO1-204ENST00000396840 DEFB113Q30KQ7 82 aa13.2□□□□□ -0.3
IFFO1-204ENST00000396840 Q9H8V8 135 aa13.2□□□□□ -0.3
IFFO1-204ENST00000396840 SS18L2Q9UHA2 77 aa13.19□□□□□ -0.3
IFFO1-204ENST00000396840 ACANP16112 2415 aa13.19□□□□□ -0.3
IFFO1-204ENST00000396840 MTORP42345 2549 aa13.19□□□□□ -0.3
IFFO1-204ENST00000396840 DNAJC30Q96LL9 226 aa13.19□□□□□ -0.3
IFFO1-204ENST00000396840 GAGE12JA6NER3 117 aa13.18□□□□□ -0.3
IFFO1-204ENST00000396840 GAGE4Q13068 117 aa13.18□□□□□ -0.3
IFFO1-204ENST00000396840 GAGE5Q13069 117 aa13.18□□□□□ -0.3
IFFO1-204ENST00000396840 C2orf82Q6UX34 121 aa13.18□□□□□ -0.3
IFFO1-204ENST00000396840 PIK3CD-AS1Q5SR53 167 aa13.18□□□□□ -0.3
IFFO1-204ENST00000396840 LINC00242Q5T6M2 205 aa13.18□□□□□ -0.3
IFFO1-204ENST00000396840 ANAPC13Q9BS18 74 aa13.18□□□□□ -0.3
IFFO1-204ENST00000396840 TRBV10-2A0A0K0K1G8 114 aa13.17□□□□□ -0.3
IFFO1-204ENST00000396840 WFDC10AQ9H1F0 79 aa13.17□□□□□ -0.3
IFFO1-204ENST00000396840 H7C423 109 aa13.16□□□□□ -0.3
IFFO1-204ENST00000396840 NTM-AS1Q6ZSK4 140 aa13.16□□□□□ -0.3
IFFO1-204ENST00000396840 COX6CP09669 75 aa13.16□□□□□ -0.3
IFFO1-204ENST00000396840 NOP10Q9NPE3 64 aaKnown RBP13.16□□□□□ -0.3
IFFO1-204ENST00000396840 TMEM262E9PQX1 116 aa13.15□□□□□ -0.3
IFFO1-204ENST00000396840 NDUFA1O15239 70 aa13.15□□□□□ -0.31
IFFO1-204ENST00000396840 CRLF1O75462 422 aa13.14□□□□□ -0.31
IFFO1-204ENST00000396840 RPL36AP83881 106 aaKnown RBP13.14□□□□□ -0.31
IFFO1-204ENST00000396840 RPL36ALQ969Q0 106 aaKnown RBP13.14□□□□□ -0.31
IFFO1-204ENST00000396840 YAE1D1Q9NRH1 226 aa13.14□□□□□ -0.31
IFFO1-204ENST00000396840 PLA2G2AP14555 144 aa13.14□□□□□ -0.31
IFFO1-204ENST00000396840 TIRAPP58753 221 aa13.14□□□□□ -0.31
IFFO1-204ENST00000396840 UBE2WQ96B02 151 aa13.14□□□□□ -0.31
IFFO1-204ENST00000396840 IGKV3OR2-268A0A0C4DH90 116 aa13.13□□□□□ -0.31
IFFO1-204ENST00000396840 CCL24O00175 119 aa13.13□□□□□ -0.31
IFFO1-204ENST00000396840 CIRBPQ14011 172 aaKnown RBP13.13□□□□□ -0.31
IFFO1-204ENST00000396840 CITED2Q99967 270 aaPredicted RBP13.13□□□□□ -0.31
IFFO1-204ENST00000396840 DNAJC9-AS1A6NH13 148 aa13.13□□□□□ -0.31
IFFO1-204ENST00000396840 K7EQD1 137 aa13.13□□□□□ -0.31
IFFO1-204ENST00000396840 LOC100131303A0A0U1RQF7 123 aa13.12□□□□□ -0.31
IFFO1-204ENST00000396840 HERVK_113P63121 156 aa13.12□□□□□ -0.31
IFFO1-204ENST00000396840 MEIG1Q5JSS6 88 aa13.12□□□□□ -0.31
IFFO1-204ENST00000396840 LINC00308Q8TCZ7 52 aa13.12□□□□□ -0.31
IFFO1-204ENST00000396840 IGLV5-45A0A087WSX0 123 aa13.12□□□□□ -0.31
IFFO1-204ENST00000396840 TRAV4A0A0B4J268 109 aa13.12□□□□□ -0.31
IFFO1-204ENST00000396840 PRIMA1Q86XR5 153 aa13.12□□□□□ -0.31
IFFO1-204ENST00000396840 TRAV8-4A0A0B4J246 113 aa13.11□□□□□ -0.31
IFFO1-204ENST00000396840 SMIM1B2RUZ4 78 aa13.11□□□□□ -0.31
IFFO1-204ENST00000396840 RPL35AP18077 110 aaKnown RBP13.11□□□□□ -0.31
IFFO1-204ENST00000396840 TEX29Q8N6K0 151 aa13.11□□□□□ -0.31
IFFO1-204ENST00000396840 WFDC11Q8NEX6 87 aa13.11□□□□□ -0.31
IFFO1-204ENST00000396840 B5MCH6 92 aa13.11□□□□□ -0.31
IFFO1-204ENST00000396840 GAGE7O76087 117 aa13.1□□□□□ -0.31
IFFO1-204ENST00000396840 GAGE12FP0CL80 117 aa13.1□□□□□ -0.31
IFFO1-204ENST00000396840 GAGE12GP0CL81 117 aa13.1□□□□□ -0.31
IFFO1-204ENST00000396840 GAGE12IP0CL82 117 aa13.1□□□□□ -0.31
IFFO1-204ENST00000396840 SOSTDC1Q6X4U4 206 aa13.1□□□□□ -0.31
IFFO1-204ENST00000396840 ESM1Q9NQ30 184 aa13.1□□□□□ -0.31
IFFO1-204ENST00000396840 M0QXV9 152 aa13.1□□□□□ -0.31
IFFO1-204ENST00000396840 SNCGO76070 127 aa13.09□□□□□ -0.31
IFFO1-204ENST00000396840 HIST2H2BCQ6DN03 193 aa13.09□□□□□ -0.31
IFFO1-204ENST00000396840 FN1P02751 2386 aaKnown RBP13.09□□□□□ -0.31
IFFO1-204ENST00000396840 TRGV2A0A075B6R0 118 aa13.09□□□□□ -0.31
IFFO1-204ENST00000396840 LST1O00453 97 aa13.09□□□□□ -0.31
IFFO1-204ENST00000396840 IFITM1P13164 125 aa13.09□□□□□ -0.31
IFFO1-204ENST00000396840 KRTAP1-3Q8IUG1 177 aa13.09□□□□□ -0.31
IFFO1-204ENST00000396840 IGLV5-39A0A0G2JS06 123 aa13.08□□□□□ -0.31
IFFO1-204ENST00000396840 TIMM17BO60830 172 aa13.08□□□□□ -0.31
IFFO1-204ENST00000396840 ZNF843Q8N446 348 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms