RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 K7EP13 123 aa11.51□□□□□ -0.57
SNX6-202ENST00000396526 DEFB130BP0DP73 79 aa11.51□□□□□ -0.57
SNX6-202ENST00000396526 DEFB130AP0DP74 79 aa11.51□□□□□ -0.57
SNX6-202ENST00000396526 C12orf74Q32Q52 190 aa11.51□□□□□ -0.57
SNX6-202ENST00000396526 GTSF1LQ9H1H1 148 aa11.51□□□□□ -0.57
SNX6-202ENST00000396526 CSDC2Q9Y534 153 aaKnown RBP11.51□□□□□ -0.57
SNX6-202ENST00000396526 A0A0J9YY99 117 aa11.51□□□□□ -0.57
SNX6-202ENST00000396526 IGHV3-64A0A075B6Q5 118 aa11.51□□□□□ -0.57
SNX6-202ENST00000396526 A0A1W2PPM0 123 aa11.5□□□□□ -0.57
SNX6-202ENST00000396526 SPANXB1Q9NS25 103 aaPredicted RBP11.5□□□□□ -0.57
SNX6-202ENST00000396526 TIRAPP58753 221 aa11.5□□□□□ -0.57
SNX6-202ENST00000396526 HERVK_113P63121 156 aa11.5□□□□□ -0.57
SNX6-202ENST00000396526 SPCS1Q9Y6A9 102 aa11.5□□□□□ -0.57
SNX6-202ENST00000396526 IGHV1-58A0A0C4DH39 117 aa11.49□□□□□ -0.57
SNX6-202ENST00000396526 H7C423 109 aa11.49□□□□□ -0.57
SNX6-202ENST00000396526 TMEM238C9JI98 176 aa11.49□□□□□ -0.57
SNX6-202ENST00000396526 NSD1Q96L73 2696 aaPredicted RBP11.49□□□□□ -0.57
SNX6-202ENST00000396526 IGHV3-30-3P0DP02 117 aa11.48□□□□□ -0.57
SNX6-202ENST00000396526 NAA38Q9BRA0 125 aaKnown RBP11.48□□□□□ -0.57
SNX6-202ENST00000396526 K7ERJ3 54 aa11.48□□□□□ -0.57
SNX6-202ENST00000396526 UBE2D1P51668 147 aa11.48□□□□□ -0.57
SNX6-202ENST00000396526 TSPEAR-AS2P59090 65 aa11.48□□□□□ -0.57
SNX6-202ENST00000396526 FHL2Q14192 279 aa11.48□□□□□ -0.57
SNX6-202ENST00000396526 WFDC9Q8NEX5 89 aa11.48□□□□□ -0.57
SNX6-202ENST00000396526 AKAP9Q99996 3911 aa11.47□□□□□ -0.57
SNX6-202ENST00000396526 K7EP34 96 aa11.47□□□□□ -0.57
SNX6-202ENST00000396526 LYRM9A8MSI8 78 aa11.47□□□□□ -0.57
SNX6-202ENST00000396526 FAM104AQ969W3 186 aa11.46□□□□□ -0.57
SNX6-202ENST00000396526 NTM-AS1Q6ZSK4 140 aa11.46□□□□□ -0.58
SNX6-202ENST00000396526 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
SNX6-202ENST00000396526 IGLL5B9A064 214 aa11.45□□□□□ -0.58
SNX6-202ENST00000396526 VSIG2Q96IQ7 327 aa11.45□□□□□ -0.58
SNX6-202ENST00000396526 OTOGQ6ZRI0 2925 aa11.45□□□□□ -0.58
SNX6-202ENST00000396526 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
SNX6-202ENST00000396526 RPL24P83731 157 aaKnown RBP11.45□□□□□ -0.58
SNX6-202ENST00000396526 TRAV13-1A0A0B4J241 112 aa11.44□□□□□ -0.58
SNX6-202ENST00000396526 CHCHD5Q9BSY4 110 aa11.44□□□□□ -0.58
SNX6-202ENST00000396526 X6R8D5 127 aa11.44□□□□□ -0.58
SNX6-202ENST00000396526 HIVEP1P15822 2718 aa11.44□□□□□ -0.58
SNX6-202ENST00000396526 DEFB135Q30KP9 77 aa11.44□□□□□ -0.58
SNX6-202ENST00000396526 LYRM7Q5U5X0 104 aa11.44□□□□□ -0.58
SNX6-202ENST00000396526 SPINK8P0C7L1 97 aa11.44□□□□□ -0.58
SNX6-202ENST00000396526 CDC42SE2Q9NRR3 84 aa11.44□□□□□ -0.58
SNX6-202ENST00000396526 PRO0255Q9UI72 69 aa11.44□□□□□ -0.58
SNX6-202ENST00000396526 TRAV8-3A0A0A6YYJ7 113 aa11.43□□□□□ -0.58
SNX6-202ENST00000396526 APOMO95445 188 aa11.43□□□□□ -0.58
SNX6-202ENST00000396526 LINC00694P0DN24 101 aa11.43□□□□□ -0.58
SNX6-202ENST00000396526 LINC00612Q8N6U2 182 aa11.43□□□□□ -0.58
SNX6-202ENST00000396526 LOC100131303A0A0U1RQF7 123 aa11.43□□□□□ -0.58
SNX6-202ENST00000396526 SBSPONQ8IVN8 264 aa11.43□□□□□ -0.58
SNX6-202ENST00000396526 CDKN2A-AS1Q9UH64 79 aa11.43□□□□□ -0.58
SNX6-202ENST00000396526 F8P00451 2351 aa11.42□□□□□ -0.58
SNX6-202ENST00000396526 TRBV6-8A0A0A6YYG3 113 aa11.42□□□□□ -0.58
SNX6-202ENST00000396526 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
SNX6-202ENST00000396526 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
SNX6-202ENST00000396526 CIRBPQ14011 172 aaKnown RBP11.42□□□□□ -0.58
SNX6-202ENST00000396526 FAM222AQ5U5X8 452 aa11.42□□□□□ -0.58
SNX6-202ENST00000396526 ATP6V0E2Q8NHE4 81 aa11.42□□□□□ -0.58
SNX6-202ENST00000396526 IGLV5-45A0A087WSX0 123 aa11.41□□□□□ -0.58
SNX6-202ENST00000396526 A0A0J9YXY3 114 aa11.41□□□□□ -0.58
SNX6-202ENST00000396526 PRSS2P07478 247 aa11.41□□□□□ -0.58
SNX6-202ENST00000396526 GYPEP15421 78 aa11.41□□□□□ -0.58
SNX6-202ENST00000396526 PGPEP1Q9NXJ5 209 aa11.41□□□□□ -0.58
SNX6-202ENST00000396526 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.41□□□□□ -0.58
SNX6-202ENST00000396526 MIFP14174 115 aa11.41□□□□□ -0.58
SNX6-202ENST00000396526 GAGE6Q13070 117 aa11.41□□□□□ -0.58
SNX6-202ENST00000396526 LINC00242Q5T6M2 205 aa11.41□□□□□ -0.58
SNX6-202ENST00000396526 SPATA3Q8NHX4 192 aa11.41□□□□□ -0.58
SNX6-202ENST00000396526 DAD1P61803 113 aa11.4□□□□□ -0.58
SNX6-202ENST00000396526 ZFAND6Q6FIF0 208 aa11.4□□□□□ -0.58
SNX6-202ENST00000396526 PAX4O43316 350 aa11.39□□□□□ -0.59
SNX6-202ENST00000396526 WIPF1O43516 503 aa11.39□□□□□ -0.59
SNX6-202ENST00000396526 C3orf56Q8N813 242 aa11.39□□□□□ -0.59
SNX6-202ENST00000396526 FAM19A3Q7Z5A8 133 aa11.39□□□□□ -0.59
SNX6-202ENST00000396526 C10orf126Q8N4M7 172 aa11.39□□□□□ -0.59
SNX6-202ENST00000396526 ATRQ13535 2644 aa11.39□□□□□ -0.59
SNX6-202ENST00000396526 FLNBO75369 2602 aaKnown RBP11.38□□□□□ -0.59
SNX6-202ENST00000396526 PRO1854Q9UHT4 67 aa11.37□□□□□ -0.59
SNX6-202ENST00000396526 TMEM262E9PQX1 116 aa11.37□□□□□ -0.59
SNX6-202ENST00000396526 SPART-AS1P0CW21 52 aa11.37□□□□□ -0.59
SNX6-202ENST00000396526 COPS9Q8WXC6 57 aa11.37□□□□□ -0.59
SNX6-202ENST00000396526 IGHV4-28A0A0C4DH34 117 aa11.36□□□□□ -0.59
SNX6-202ENST00000396526 MUSTN1Q8IVN3 82 aa11.36□□□□□ -0.59
SNX6-202ENST00000396526 ATP5G1P05496 136 aa11.36□□□□□ -0.59
SNX6-202ENST00000396526 IGHV4-30-4P0DP06 118 aa11.36□□□□□ -0.59
SNX6-202ENST00000396526 LOC107984156A0A0G2JMH3 177 aa11.36□□□□□ -0.59
SNX6-202ENST00000396526 A4D1N5 150 aa11.36□□□□□ -0.59
SNX6-202ENST00000396526 COX6A2Q02221 97 aa11.36□□□□□ -0.59
SNX6-202ENST00000396526 ARL17AQ8IVW1 177 aa11.36□□□□□ -0.59
SNX6-202ENST00000396526 NDUFA1O15239 70 aa11.35□□□□□ -0.59
SNX6-202ENST00000396526 TIMM17BO60830 172 aa11.35□□□□□ -0.59
SNX6-202ENST00000396526 CUBNO60494 3623 aa11.35□□□□□ -0.59
SNX6-202ENST00000396526 K7ERU9 68 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 CFC1BP0CG36 223 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 CFC1P0CG37 223 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 IFITM1P13164 125 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 SHISA2Q6UWI4 295 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 RNF183Q96D59 192 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 207.4 ms