RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 A0A096LNI7 61 aa10.9□□□□□ -0.66
EXOSC3-202ENST00000396521 CT83Q5H943 113 aa10.9□□□□□ -0.66
EXOSC3-202ENST00000396521 RNASEKQ6P5S7 137 aaKnown RBP10.9□□□□□ -0.66
EXOSC3-202ENST00000396521 OSTCQ9NRP0 149 aa10.9□□□□□ -0.66
EXOSC3-202ENST00000396521 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
EXOSC3-202ENST00000396521 LINC00862A6NCI5 91 aa10.89□□□□□ -0.67
EXOSC3-202ENST00000396521 A8MWL6 223 aa10.89□□□□□ -0.67
EXOSC3-202ENST00000396521 CTRLP40313 264 aa10.89□□□□□ -0.67
EXOSC3-202ENST00000396521 SMIM15Q7Z3B0 74 aa10.89□□□□□ -0.67
EXOSC3-202ENST00000396521 OR5A1Q8NGJ0 315 aa10.89□□□□□ -0.67
EXOSC3-202ENST00000396521 BORCS7Q96B45 105 aa10.89□□□□□ -0.67
EXOSC3-202ENST00000396521 BTF3L4Q96K17 158 aa10.89□□□□□ -0.67
EXOSC3-202ENST00000396521 F8W036 122 aa10.88□□□□□ -0.67
EXOSC3-202ENST00000396521 APCSP02743 223 aa10.88□□□□□ -0.67
EXOSC3-202ENST00000396521 FGF6P10767 208 aa10.88□□□□□ -0.67
EXOSC3-202ENST00000396521 PNRC1Q12796 327 aaPredicted RBP10.88□□□□□ -0.67
EXOSC3-202ENST00000396521 FOXI1Q12951 378 aa10.88□□□□□ -0.67
EXOSC3-202ENST00000396521 TWIST1Q15672 202 aa10.88□□□□□ -0.67
EXOSC3-202ENST00000396521 GATD1Q8NB37 220 aa10.88□□□□□ -0.67
EXOSC3-202ENST00000396521 TMEM101Q96IK0 257 aa10.87□□□□□ -0.67
EXOSC3-202ENST00000396521 CARD19Q96LW7 228 aa10.87□□□□□ -0.67
EXOSC3-202ENST00000396521 TMEM218A2RU14 115 aa10.86□□□□□ -0.67
EXOSC3-202ENST00000396521 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
EXOSC3-202ENST00000396521 FAM231BA6NCW3 169 aa10.85□□□□□ -0.67
EXOSC3-202ENST00000396521 ZNF561-AS1K7EIQ3 104 aa10.85□□□□□ -0.67
EXOSC3-202ENST00000396521 V9GYV3 84 aa10.85□□□□□ -0.67
EXOSC3-202ENST00000396521 ADCYAP1P18509 176 aa10.84□□□□□ -0.67
EXOSC3-202ENST00000396521 XCL1P47992 114 aa10.84□□□□□ -0.67
EXOSC3-202ENST00000396521 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
EXOSC3-202ENST00000396521 SS18Q15532 418 aa10.84□□□□□ -0.67
EXOSC3-202ENST00000396521 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.83□□□□□ -0.68
EXOSC3-202ENST00000396521 LINC00959A0A1B0GUT2 108 aa10.83□□□□□ -0.68
EXOSC3-202ENST00000396521 IGKV2-29A2NJV5 120 aaPredicted RBP10.83□□□□□ -0.68
EXOSC3-202ENST00000396521 SDHAF1A6NFY7 115 aa10.83□□□□□ -0.68
EXOSC3-202ENST00000396521 HIGD1CA8MV81 97 aa10.83□□□□□ -0.68
EXOSC3-202ENST00000396521 I3L3M4 83 aa10.83□□□□□ -0.68
EXOSC3-202ENST00000396521 PPP1R2P9O14990 202 aa10.83□□□□□ -0.68
EXOSC3-202ENST00000396521 SEC11CQ9BY50 192 aa10.83□□□□□ -0.68
EXOSC3-202ENST00000396521 CCL25O15444 150 aa10.82□□□□□ -0.68
EXOSC3-202ENST00000396521 MT-ND4LP03901 98 aa10.82□□□□□ -0.68
EXOSC3-202ENST00000396521 PMCHP20382 165 aa10.82□□□□□ -0.68
EXOSC3-202ENST00000396521 ODF1Q14990 250 aa10.82□□□□□ -0.68
EXOSC3-202ENST00000396521 CD164L2Q6UWJ8 174 aa10.82□□□□□ -0.68
EXOSC3-202ENST00000396521 NAT8BQ9UHF3 227 aa10.82□□□□□ -0.68
EXOSC3-202ENST00000396521 TRAV26-2A0A0B4J265 109 aa10.81□□□□□ -0.68
EXOSC3-202ENST00000396521 TRBV6-5A0A0K0K1A5 114 aa10.81□□□□□ -0.68
EXOSC3-202ENST00000396521 LOC107984640A0A0U1RRK4 108 aa10.81□□□□□ -0.68
EXOSC3-202ENST00000396521 GAS8-AS1O95177 125 aa10.81□□□□□ -0.68
EXOSC3-202ENST00000396521 PTTG1IPP53801 180 aa10.81□□□□□ -0.68
EXOSC3-202ENST00000396521 NDUFA5Q16718 116 aa10.81□□□□□ -0.68
EXOSC3-202ENST00000396521 ZNF664Q8N3J9 261 aa10.81□□□□□ -0.68
EXOSC3-202ENST00000396521 RPL39LQ96EH5 51 aaKnown RBP10.8□□□□□ -0.68
EXOSC3-202ENST00000396521 MRAP2Q96G30 205 aa10.8□□□□□ -0.68
EXOSC3-202ENST00000396521 A0A1B0GUT8 65 aa10.79□□□□□ -0.68
EXOSC3-202ENST00000396521 MRPL52Q86TS9 123 aaKnown RBP10.79□□□□□ -0.68
EXOSC3-202ENST00000396521 ANAPC16Q96DE5 110 aa10.79□□□□□ -0.68
EXOSC3-202ENST00000396521 ESDP10768 282 aa10.78□□□□□ -0.68
EXOSC3-202ENST00000396521 CAMPP49913 170 aa10.78□□□□□ -0.68
EXOSC3-202ENST00000396521 FOXA3P55318 350 aaPredicted RBP10.78□□□□□ -0.68
EXOSC3-202ENST00000396521 SMAGPQ0VAQ4 97 aa10.78□□□□□ -0.68
EXOSC3-202ENST00000396521 RIGQ13278 110 aa10.78□□□□□ -0.68
EXOSC3-202ENST00000396521 PSORS1C2Q9UIG4 136 aa10.78□□□□□ -0.68
EXOSC3-202ENST00000396521 SMIM27A0A1W2PRY6 76 aa10.77□□□□□ -0.69
EXOSC3-202ENST00000396521 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
EXOSC3-202ENST00000396521 LINC00526Q96FQ7 95 aa10.77□□□□□ -0.69
EXOSC3-202ENST00000396521 CDC42SE2Q9NRR3 84 aa10.77□□□□□ -0.69
EXOSC3-202ENST00000396521 CARHSP1Q9Y2V2 147 aaKnown RBP10.77□□□□□ -0.69
EXOSC3-202ENST00000396521 IGLV4-69A0A075B6H9 119 aa10.76□□□□□ -0.69
EXOSC3-202ENST00000396521 C1orf196B1AJZ1 125 aa10.76□□□□□ -0.69
EXOSC3-202ENST00000396521 MALP21145 153 aa10.76□□□□□ -0.69
EXOSC3-202ENST00000396521 GAGE2BQ13066 116 aa10.76□□□□□ -0.69
EXOSC3-202ENST00000396521 ST20Q9HBF5 79 aa10.76□□□□□ -0.69
EXOSC3-202ENST00000396521 APOMO95445 188 aa10.75□□□□□ -0.69
EXOSC3-202ENST00000396521 MT-ND6P03923 174 aa10.75□□□□□ -0.69
EXOSC3-202ENST00000396521 C2orf48Q96LS8 159 aa10.75□□□□□ -0.69
EXOSC3-202ENST00000396521 COX7A2LO14548 114 aa10.74□□□□□ -0.69
EXOSC3-202ENST00000396521 APOC3P02656 99 aa10.74□□□□□ -0.69
EXOSC3-202ENST00000396521 S100A8P05109 93 aa10.74□□□□□ -0.69
EXOSC3-202ENST00000396521 RHEBQ15382 184 aa10.74□□□□□ -0.69
EXOSC3-202ENST00000396521 C10orf91Q5T1B1 145 aa10.74□□□□□ -0.69
EXOSC3-202ENST00000396521 MRPL54Q6P161 138 aaKnown RBP10.74□□□□□ -0.69
EXOSC3-202ENST00000396521 CTDSP1Q9GZU7 261 aa10.74□□□□□ -0.69
EXOSC3-202ENST00000396521 CSDC2Q9Y534 153 aaKnown RBP10.74□□□□□ -0.69
EXOSC3-202ENST00000396521 A0A1B0GW15 77 aa10.73□□□□□ -0.69
EXOSC3-202ENST00000396521 TSHBP01222 138 aa10.73□□□□□ -0.69
EXOSC3-202ENST00000396521 SVBPQ8N300 66 aa10.73□□□□□ -0.69
EXOSC3-202ENST00000396521 DIRC1Q969H9 104 aa10.73□□□□□ -0.69
EXOSC3-202ENST00000396521 TRBV27A0A0K0K1C4 114 aa10.72□□□□□ -0.69
EXOSC3-202ENST00000396521 A0A1W2PNN7 141 aa10.72□□□□□ -0.69
EXOSC3-202ENST00000396521 C7orf77A4D0Y5 90 aa10.72□□□□□ -0.69
EXOSC3-202ENST00000396521 HBBP68871 147 aa10.72□□□□□ -0.69
EXOSC3-202ENST00000396521 CAMK2N2Q96S95 79 aa10.72□□□□□ -0.69
EXOSC3-202ENST00000396521 SNAPINO95295 136 aa10.71□□□□□ -0.69
EXOSC3-202ENST00000396521 S100PP25815 95 aa10.71□□□□□ -0.69
EXOSC3-202ENST00000396521 POLR2KP53803 58 aaKnown RBP10.71□□□□□ -0.69
EXOSC3-202ENST00000396521 RNF151Q2KHN1 245 aa10.71□□□□□ -0.69
EXOSC3-202ENST00000396521 C9orf116Q5BN46 136 aaPredicted RBP10.71□□□□□ -0.69
EXOSC3-202ENST00000396521 ATP5L2Q7Z4Y8 100 aa10.71□□□□□ -0.69
EXOSC3-202ENST00000396521 TMEM191AQ9H0A3 160 aa10.71□□□□□ -0.69
EXOSC3-202ENST00000396521 RPS10P5Q9NQ39 176 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms