RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 C20orf78Q9BR46 151 aa11.35□□□□□ -0.59
UPK3A-202ENST00000396082 D6R8Y8 96 aa11.34□□□□□ -0.59
UPK3A-202ENST00000396082 INAFM2P0DMQ5 153 aa11.34□□□□□ -0.59
UPK3A-202ENST00000396082 MRPL52Q86TS9 123 aaKnown RBP11.34□□□□□ -0.59
UPK3A-202ENST00000396082 C9orf163Q8N9P6 203 aa11.34□□□□□ -0.59
UPK3A-202ENST00000396082 CHAC1Q9BUX1 264 aa11.34□□□□□ -0.59
UPK3A-202ENST00000396082 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.33□□□□□ -0.6
UPK3A-202ENST00000396082 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
UPK3A-202ENST00000396082 TRBV24-1A0A075B6N3 115 aa11.32□□□□□ -0.6
UPK3A-202ENST00000396082 XCL1P47992 114 aa11.32□□□□□ -0.6
UPK3A-202ENST00000396082 SS18Q15532 418 aa11.32□□□□□ -0.6
UPK3A-202ENST00000396082 LINC00528Q8N1L1 170 aa11.32□□□□□ -0.6
UPK3A-202ENST00000396082 ZNF664Q8N3J9 261 aa11.32□□□□□ -0.6
UPK3A-202ENST00000396082 TMEM18Q96B42 140 aa11.32□□□□□ -0.6
UPK3A-202ENST00000396082 CDC42SE2Q9NRR3 84 aa11.32□□□□□ -0.6
UPK3A-202ENST00000396082 DNAH8Q96JB1 4490 aa11.32□□□□□ -0.6
UPK3A-202ENST00000396082 LINC00959A0A1B0GUT2 108 aa11.31□□□□□ -0.6
UPK3A-202ENST00000396082 TCAPO15273 167 aa11.31□□□□□ -0.6
UPK3A-202ENST00000396082 PPBPP02775 128 aa11.31□□□□□ -0.6
UPK3A-202ENST00000396082 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
UPK3A-202ENST00000396082 CCL25O15444 150 aa11.3□□□□□ -0.6
UPK3A-202ENST00000396082 NPYP01303 97 aa11.3□□□□□ -0.6
UPK3A-202ENST00000396082 PLA2G1BP04054 148 aaKnown RBP11.3□□□□□ -0.6
UPK3A-202ENST00000396082 RPL32P62910 135 aaKnown RBP11.3□□□□□ -0.6
UPK3A-202ENST00000396082 HIGD2BQ4VC39 106 aa11.3□□□□□ -0.6
UPK3A-202ENST00000396082 UQCC3Q6UW78 93 aa11.3□□□□□ -0.6
UPK3A-202ENST00000396082 ORMDL3Q8N138 153 aa11.3□□□□□ -0.6
UPK3A-202ENST00000396082 C15orf56Q8N910 161 aa11.3□□□□□ -0.6
UPK3A-202ENST00000396082 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
UPK3A-202ENST00000396082 SMIM2Q9BVW6 85 aa11.3□□□□□ -0.6
UPK3A-202ENST00000396082 FAT1Q14517 4588 aa11.29□□□□□ -0.6
UPK3A-202ENST00000396082 PHOX2AO14813 284 aa11.29□□□□□ -0.6
UPK3A-202ENST00000396082 IFITM2Q01629 132 aa11.29□□□□□ -0.6
UPK3A-202ENST00000396082 UBE2D4Q9Y2X8 147 aa11.29□□□□□ -0.6
UPK3A-202ENST00000396082 IGHV3-64A0A075B6Q5 118 aa11.28□□□□□ -0.6
UPK3A-202ENST00000396082 FOXI1Q12951 378 aa11.28□□□□□ -0.6
UPK3A-202ENST00000396082 TMEM136Q6ZRR5 245 aa11.28□□□□□ -0.6
UPK3A-202ENST00000396082 PRELID3AQ96N28 172 aa11.28□□□□□ -0.6
UPK3A-202ENST00000396082 CSDC2Q9Y534 153 aaKnown RBP11.28□□□□□ -0.6
UPK3A-202ENST00000396082 RNASE13Q5GAN3 156 aaKnown RBP11.27□□□□□ -0.61
UPK3A-202ENST00000396082 SLPIP03973 132 aa11.26□□□□□ -0.61
UPK3A-202ENST00000396082 GVQW2A0A096LPI5 108 aaPredicted RBP11.25□□□□□ -0.61
UPK3A-202ENST00000396082 TMEM218A2RU14 115 aa11.25□□□□□ -0.61
UPK3A-202ENST00000396082 ADCYAP1P18509 176 aa11.25□□□□□ -0.61
UPK3A-202ENST00000396082 RAB5AP20339 215 aa11.25□□□□□ -0.61
UPK3A-202ENST00000396082 CD164L2Q6UWJ8 174 aa11.25□□□□□ -0.61
UPK3A-202ENST00000396082 SDIM1Q6ZPB5 146 aa11.25□□□□□ -0.61
UPK3A-202ENST00000396082 Q6ZUT4 128 aa11.25□□□□□ -0.61
UPK3A-202ENST00000396082 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
UPK3A-202ENST00000396082 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.25□□□□□ -0.61
UPK3A-202ENST00000396082 TRAV13-1A0A0B4J241 112 aa11.24□□□□□ -0.61
UPK3A-202ENST00000396082 IGHV1-58A0A0C4DH39 117 aa11.24□□□□□ -0.61
UPK3A-202ENST00000396082 C1orf196B1AJZ1 125 aa11.24□□□□□ -0.61
UPK3A-202ENST00000396082 RPL39P62891 51 aaKnown RBP11.24□□□□□ -0.61
UPK3A-202ENST00000396082 COMMD7Q86VX2 200 aa11.24□□□□□ -0.61
UPK3A-202ENST00000396082 DPH3Q96FX2 82 aa11.24□□□□□ -0.61
UPK3A-202ENST00000396082 MALP21145 153 aa11.23□□□□□ -0.61
UPK3A-202ENST00000396082 MAP1LC3AQ9H492 121 aa11.23□□□□□ -0.61
UPK3A-202ENST00000396082 SPANXA1Q9NS26 97 aa11.23□□□□□ -0.61
UPK3A-202ENST00000396082 LAMTOR2Q9Y2Q5 125 aa11.23□□□□□ -0.61
UPK3A-202ENST00000396082 LOC389332A0A1B0GUA5 103 aa11.22□□□□□ -0.61
UPK3A-202ENST00000396082 IMMP2LQ96T52 175 aa11.22□□□□□ -0.61
UPK3A-202ENST00000396082 ZNF561-AS1K7EIQ3 104 aa11.21□□□□□ -0.61
UPK3A-202ENST00000396082 SEC11CQ9BY50 192 aa11.21□□□□□ -0.61
UPK3A-202ENST00000396082 CTDSP1Q9GZU7 261 aa11.21□□□□□ -0.61
UPK3A-202ENST00000396082 PANO1I0J062 215 aa11.2□□□□□ -0.62
UPK3A-202ENST00000396082 COX7A2LO14548 114 aa11.2□□□□□ -0.62
UPK3A-202ENST00000396082 CHTF8P0CG12 524 aa11.2□□□□□ -0.62
UPK3A-202ENST00000396082 IFI27P40305 119 aaPredicted RBP11.2□□□□□ -0.62
UPK3A-202ENST00000396082 LINC00526Q96FQ7 95 aa11.2□□□□□ -0.62
UPK3A-202ENST00000396082 COX6A2Q02221 97 aa11.19□□□□□ -0.62
UPK3A-202ENST00000396082 S100PP25815 95 aa11.18□□□□□ -0.62
UPK3A-202ENST00000396082 CARD19Q96LW7 228 aa11.18□□□□□ -0.62
UPK3A-202ENST00000396082 OPRPNQ99935 248 aaPredicted RBP11.18□□□□□ -0.62
UPK3A-202ENST00000396082 VPS13BQ7Z7G8 4022 aa11.18□□□□□ -0.62
UPK3A-202ENST00000396082 TRAV9-1A0A075B6T8 112 aa11.17□□□□□ -0.62
UPK3A-202ENST00000396082 IGKV2-24A0A0C4DH68 120 aa11.17□□□□□ -0.62
UPK3A-202ENST00000396082 IFITM10A6NMD0 228 aa11.17□□□□□ -0.62
UPK3A-202ENST00000396082 PRSS47A8MTI9 375 aa11.17□□□□□ -0.62
UPK3A-202ENST00000396082 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
UPK3A-202ENST00000396082 MRPS36P82909 103 aaKnown RBP11.17□□□□□ -0.62
UPK3A-202ENST00000396082 CIRBPQ14011 172 aaKnown RBP11.17□□□□□ -0.62
UPK3A-202ENST00000396082 C5orf38Q86SI9 138 aa11.17□□□□□ -0.62
UPK3A-202ENST00000396082 Q8N8P6 123 aa11.17□□□□□ -0.62
UPK3A-202ENST00000396082 PKIGQ9Y2B9 76 aa11.17□□□□□ -0.62
UPK3A-202ENST00000396082 FLG2Q5D862 2391 aaPredicted RBP11.16□□□□□ -0.62
UPK3A-202ENST00000396082 APOMO95445 188 aa11.16□□□□□ -0.62
UPK3A-202ENST00000396082 PRSS3P2Q8NHM4 247 aa11.16□□□□□ -0.62
UPK3A-202ENST00000396082 SPACA4Q8TDM5 124 aa11.16□□□□□ -0.62
UPK3A-202ENST00000396082 A0A087WYN8 130 aa11.15□□□□□ -0.62
UPK3A-202ENST00000396082 SYCNQ0VAF6 134 aa11.15□□□□□ -0.62
UPK3A-202ENST00000396082 MAJINQ3KP22 176 aa11.15□□□□□ -0.62
UPK3A-202ENST00000396082 IGLV4-69A0A075B6H9 119 aa11.14□□□□□ -0.63
UPK3A-202ENST00000396082 ORMDL2Q53FV1 153 aa11.14□□□□□ -0.63
UPK3A-202ENST00000396082 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
UPK3A-202ENST00000396082 KIAA1644Q3SXP7 199 aa11.13□□□□□ -0.63
UPK3A-202ENST00000396082 FAM104AQ969W3 186 aa11.13□□□□□ -0.63
UPK3A-202ENST00000396082 TMEM141Q96I45 108 aa11.13□□□□□ -0.63
UPK3A-202ENST00000396082 CAMK2N2Q96S95 79 aa11.13□□□□□ -0.63
UPK3A-202ENST00000396082 NXT2Q9NPJ8 142 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms