RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CDPF1Q6NVV7 123 aa14.06□□□□□ -0.16
VCPKMT-202ENST00000395860 Q6ZUT4 128 aa14.06□□□□□ -0.16
VCPKMT-202ENST00000395860 OR5A1Q8NGJ0 315 aa14.06□□□□□ -0.16
VCPKMT-202ENST00000395860 PRSS29PA6NIE9 313 aa14.06□□□□□ -0.16
VCPKMT-202ENST00000395860 RNASE13Q5GAN3 156 aaKnown RBP14.06□□□□□ -0.16
VCPKMT-202ENST00000395860 TEX43Q6ZNM6 134 aa14.06□□□□□ -0.16
VCPKMT-202ENST00000395860 C12orf57Q99622 126 aa14.06□□□□□ -0.16
VCPKMT-202ENST00000395860 CST9LQ9H4G1 147 aa14.06□□□□□ -0.16
VCPKMT-202ENST00000395860 LINC00518Q8N0U6 118 aa14.05□□□□□ -0.16
VCPKMT-202ENST00000395860 CHTOPQ9Y3Y2 248 aaKnown RBP14.05□□□□□ -0.16
VCPKMT-202ENST00000395860 ESRGQ1W209 222 aa14.04□□□□□ -0.16
VCPKMT-202ENST00000395860 ATOH7Q8N100 152 aa14.04□□□□□ -0.16
VCPKMT-202ENST00000395860 AMELXQ99217 191 aa14.04□□□□□ -0.16
VCPKMT-202ENST00000395860 TRAV8-6A0A0B4J262 113 aa14.04□□□□□ -0.16
VCPKMT-202ENST00000395860 MRPL35Q9NZE8 188 aaKnown RBP14.04□□□□□ -0.16
VCPKMT-202ENST00000395860 F8VRH5 84 aa14.03□□□□□ -0.16
VCPKMT-202ENST00000395860 ZNF664Q8N3J9 261 aa14.03□□□□□ -0.16
VCPKMT-202ENST00000395860 CDC42SE2Q9NRR3 84 aa14.03□□□□□ -0.16
VCPKMT-202ENST00000395860 STAB2Q8WWQ8 2551 aa14.02□□□□□ -0.16
VCPKMT-202ENST00000395860 MPV17L2Q567V2 206 aa14.02□□□□□ -0.16
VCPKMT-202ENST00000395860 C2orf88Q9BSF0 95 aa14.02□□□□□ -0.16
VCPKMT-202ENST00000395860 IGLV4-60A0A075B6I1 120 aa14.01□□□□□ -0.17
VCPKMT-202ENST00000395860 A0A1B0GUV1 79 aa14.01□□□□□ -0.17
VCPKMT-202ENST00000395860 PKIAP61925 76 aa14.01□□□□□ -0.17
VCPKMT-202ENST00000395860 NUPR2A6NF83 97 aa14.01□□□□□ -0.17
VCPKMT-202ENST00000395860 RBX1P62877 108 aa14.01□□□□□ -0.17
VCPKMT-202ENST00000395860 DPM2O94777 84 aa14□□□□□ -0.17
VCPKMT-202ENST00000395860 IGKCP01834 107 aa14□□□□□ -0.17
VCPKMT-202ENST00000395860 S100A12P80511 92 aa14□□□□□ -0.17
VCPKMT-202ENST00000395860 PLNP26678 52 aa13.99□□□□□ -0.17
VCPKMT-202ENST00000395860 VAMP8Q9BV40 100 aa13.98□□□□□ -0.17
VCPKMT-202ENST00000395860 KLK5Q9Y337 293 aaPredicted RBP13.98□□□□□ -0.17
VCPKMT-202ENST00000395860 IGLV4-69A0A075B6H9 119 aa13.97□□□□□ -0.17
VCPKMT-202ENST00000395860 CCL18P55774 89 aa13.97□□□□□ -0.17
VCPKMT-202ENST00000395860 WFDC10BQ8IUB3 73 aa13.97□□□□□ -0.17
VCPKMT-202ENST00000395860 Q8N3U1 123 aa13.96□□□□□ -0.17
VCPKMT-202ENST00000395860 TRAV9-2A0A087WT02 112 aa13.96□□□□□ -0.18
VCPKMT-202ENST00000395860 A0A0J9YXV3 536 aa13.96□□□□□ -0.18
VCPKMT-202ENST00000395860 MAJINQ3KP22 176 aa13.96□□□□□ -0.18
VCPKMT-202ENST00000395860 HSBP1L1C9JCN9 74 aa13.95□□□□□ -0.18
VCPKMT-202ENST00000395860 UBE2D1P51668 147 aa13.95□□□□□ -0.18
VCPKMT-202ENST00000395860 APLNQ9ULZ1 77 aa13.95□□□□□ -0.18
VCPKMT-202ENST00000395860 TRAV13-1A0A0B4J241 112 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 IGKV3OR2-268A0A0C4DH90 116 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 hDV102S1A0JD36 115 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 C11orf86A6NJI1 115 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 ANGP03950 147 aaKnown RBP13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 IGLC3P0DOY3 106 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 CHAC1Q9BUX1 264 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 PAM16Q9Y3D7 125 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 LINC00588Q9Y4M8 146 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 FBN3Q75N90 2809 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 NFE4Q86UQ8 179 aa13.94□□□□□ -0.18
VCPKMT-202ENST00000395860 IGHV3-30P01768 117 aa13.93□□□□□ -0.18
VCPKMT-202ENST00000395860 IGHV3-33P01772 117 aa13.93□□□□□ -0.18
VCPKMT-202ENST00000395860 IGHV3-30-3P0DP02 117 aa13.93□□□□□ -0.18
VCPKMT-202ENST00000395860 IGHV3-30-5P0DP03 117 aa13.93□□□□□ -0.18
VCPKMT-202ENST00000395860 MRPS16Q9Y3D3 137 aaKnown RBP13.93□□□□□ -0.18
VCPKMT-202ENST00000395860 SPATA45Q537H7 98 aa13.91□□□□□ -0.18
VCPKMT-202ENST00000395860 CLPSL2Q6UWE3 100 aa13.91□□□□□ -0.18
VCPKMT-202ENST00000395860 LINC00269Q8N2A0 174 aa13.91□□□□□ -0.18
VCPKMT-202ENST00000395860 STPG4Q8N801 248 aa13.91□□□□□ -0.18
VCPKMT-202ENST00000395860 TINCRA0A1B0GVN0 87 aa13.91□□□□□ -0.18
VCPKMT-202ENST00000395860 GEMIN7Q9H840 131 aaKnown RBP13.91□□□□□ -0.18
VCPKMT-202ENST00000395860 TCTAP57738 103 aa13.9□□□□□ -0.18
VCPKMT-202ENST00000395860 SEC11AP67812 179 aa13.9□□□□□ -0.18
VCPKMT-202ENST00000395860 TMEM170BQ5T4T1 132 aa13.9□□□□□ -0.18
VCPKMT-202ENST00000395860 ZFAND6Q6FIF0 208 aa13.9□□□□□ -0.18
VCPKMT-202ENST00000395860 LINC00242Q5T6M2 205 aa13.89□□□□□ -0.19
VCPKMT-202ENST00000395860 FAM19A3Q7Z5A8 133 aa13.89□□□□□ -0.19
VCPKMT-202ENST00000395860 KLK12Q9UKR0 248 aa13.89□□□□□ -0.19
VCPKMT-202ENST00000395860 REG3AQ06141 175 aa13.88□□□□□ -0.19
VCPKMT-202ENST00000395860 LINC00959A0A1B0GUT2 108 aa13.88□□□□□ -0.19
VCPKMT-202ENST00000395860 ZNF22P17026 224 aaPredicted RBP13.88□□□□□ -0.19
VCPKMT-202ENST00000395860 HERVK_113P63121 156 aa13.88□□□□□ -0.19
VCPKMT-202ENST00000395860 LINC01556Q5JQF7 62 aa13.88□□□□□ -0.19
VCPKMT-202ENST00000395860 SIVA1O15304 175 aa13.87□□□□□ -0.19
VCPKMT-202ENST00000395860 SS18Q15532 418 aa13.87□□□□□ -0.19
VCPKMT-202ENST00000395860 MUC7Q8TAX7 377 aa13.87□□□□□ -0.19
VCPKMT-202ENST00000395860 UPK3BQ9BT76 320 aa13.87□□□□□ -0.19
VCPKMT-202ENST00000395860 COX6A2Q02221 97 aa13.86□□□□□ -0.19
VCPKMT-202ENST00000395860 ANKRD39Q53RE8 183 aa13.86□□□□□ -0.19
VCPKMT-202ENST00000395860 UBE2DNLQ8IWF7 75 aa13.86□□□□□ -0.19
VCPKMT-202ENST00000395860 WWC2-AS2Q96NR7 200 aa13.86□□□□□ -0.19
VCPKMT-202ENST00000395860 DNAH10OSP0CZ25 163 aa13.86□□□□□ -0.19
VCPKMT-202ENST00000395860 LINC00469Q8N7U9 141 aa13.86□□□□□ -0.19
VCPKMT-202ENST00000395860 CRPP02741 224 aa13.84□□□□□ -0.19
VCPKMT-202ENST00000395860 HERVK_113P61574 105 aa13.84□□□□□ -0.19
VCPKMT-202ENST00000395860 PRO1933Q9H354 126 aa13.84□□□□□ -0.19
VCPKMT-202ENST00000395860 PRR34Q9NV39 138 aa13.84□□□□□ -0.19
VCPKMT-202ENST00000395860 CCL25O15444 150 aa13.83□□□□□ -0.19
VCPKMT-202ENST00000395860 CDKN2A-AS1Q9UH64 79 aa13.83□□□□□ -0.19
VCPKMT-202ENST00000395860 IGLV5-45A0A087WSX0 123 aa13.83□□□□□ -0.2
VCPKMT-202ENST00000395860 TMEM223A0PJW6 202 aa13.82□□□□□ -0.2
VCPKMT-202ENST00000395860 H3BRM9 83 aa13.82□□□□□ -0.2
VCPKMT-202ENST00000395860 ENHOQ6UWT2 76 aa13.82□□□□□ -0.2
VCPKMT-202ENST00000395860 UBE2WQ96B02 151 aa13.82□□□□□ -0.2
VCPKMT-202ENST00000395860 Q9H8V8 135 aa13.82□□□□□ -0.2
VCPKMT-202ENST00000395860 DNAH7Q8WXX0 4024 aa13.82□□□□□ -0.2
VCPKMT-202ENST00000395860 DYNC2H1Q8NCM8 4307 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms