RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 C9JQL5 133 aa8.86□□□□□ -0.99
CXCL12-205ENST00000395794 GAS8-AS1O95177 125 aa8.86□□□□□ -0.99
CXCL12-205ENST00000395794 TSHBP01222 138 aa8.86□□□□□ -0.99
CXCL12-205ENST00000395794 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
CXCL12-205ENST00000395794 SDIM1Q6ZPB5 146 aa8.86□□□□□ -0.99
CXCL12-205ENST00000395794 SMIM27A0A1W2PRY6 76 aa8.85□□□□□ -0.99
CXCL12-205ENST00000395794 ESDP10768 282 aa8.85□□□□□ -0.99
CXCL12-205ENST00000395794 RPS10P46783 165 aaKnown RBP8.85□□□□□ -0.99
CXCL12-205ENST00000395794 CAMPP49913 170 aa8.85□□□□□ -0.99
CXCL12-205ENST00000395794 POLR2KP53803 58 aaKnown RBP8.85□□□□□ -0.99
CXCL12-205ENST00000395794 KIR2DL4Q99706 377 aa8.85□□□□□ -0.99
CXCL12-205ENST00000395794 C7orf77A4D0Y5 90 aa8.84□□□□□ -0.99
CXCL12-205ENST00000395794 SMKR1H3BMG3 65 aa8.84□□□□□ -0.99
CXCL12-205ENST00000395794 PPP1R2P9O14990 202 aa8.84□□□□□ -0.99
CXCL12-205ENST00000395794 S100A8P05109 93 aa8.84□□□□□ -0.99
CXCL12-205ENST00000395794 SUMO2P61956 95 aaKnown RBP8.84□□□□□ -0.99
CXCL12-205ENST00000395794 SRSF3P84103 164 aaKnown RBP8.84□□□□□ -0.99
CXCL12-205ENST00000395794 SS18Q15532 418 aa8.84□□□□□ -0.99
CXCL12-205ENST00000395794 F8W036 122 aa8.83□□□□□ -1
CXCL12-205ENST00000395794 XCL1P47992 114 aa8.83□□□□□ -1
CXCL12-205ENST00000395794 RPL37AP61513 92 aaKnown RBP8.83□□□□□ -1
CXCL12-205ENST00000395794 FAM104BQ5XKR9 115 aa8.83□□□□□ -1
CXCL12-205ENST00000395794 MRPL52Q86TS9 123 aaKnown RBP8.83□□□□□ -1
CXCL12-205ENST00000395794 C15orf56Q8N910 161 aa8.83□□□□□ -1
CXCL12-205ENST00000395794 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
CXCL12-205ENST00000395794 HERC1Q15751 4861 aa8.82□□□□□ -1
CXCL12-205ENST00000395794 MYCBP2O75592 4640 aa8.82□□□□□ -1
CXCL12-205ENST00000395794 LINC00959A0A1B0GUT2 108 aa8.82□□□□□ -1
CXCL12-205ENST00000395794 LINC00862A6NCI5 91 aa8.82□□□□□ -1
CXCL12-205ENST00000395794 CCL25O15444 150 aa8.82□□□□□ -1
CXCL12-205ENST00000395794 CKS2P33552 79 aa8.82□□□□□ -1
CXCL12-205ENST00000395794 MRPL51Q4U2R6 128 aaKnown RBP8.82□□□□□ -1
CXCL12-205ENST00000395794 HIGD2BQ4VC39 106 aa8.82□□□□□ -1
CXCL12-205ENST00000395794 ZNF664Q8N3J9 261 aa8.82□□□□□ -1
CXCL12-205ENST00000395794 TMEM18Q96B42 140 aa8.82□□□□□ -1
CXCL12-205ENST00000395794 SLPIP03973 132 aa8.81□□□□□ -1
CXCL12-205ENST00000395794 RAB14P61106 215 aa8.81□□□□□ -1
CXCL12-205ENST00000395794 FOXI1Q12951 378 aa8.81□□□□□ -1
CXCL12-205ENST00000395794 NRACQ8N912 160 aa8.81□□□□□ -1
CXCL12-205ENST00000395794 C20orf78Q9BR46 151 aa8.81□□□□□ -1
CXCL12-205ENST00000395794 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
CXCL12-205ENST00000395794 DMBT1Q9UGM3 2413 aaPredicted RBP8.81□□□□□ -1
CXCL12-205ENST00000395794 GVQW2A0A096LPI5 108 aaPredicted RBP8.8□□□□□ -1
CXCL12-205ENST00000395794 IGHV1-58A0A0C4DH39 117 aa8.8□□□□□ -1
CXCL12-205ENST00000395794 TCAPO15273 167 aa8.8□□□□□ -1
CXCL12-205ENST00000395794 HBBP68871 147 aa8.8□□□□□ -1
CXCL12-205ENST00000395794 MRPL54Q6P161 138 aaKnown RBP8.8□□□□□ -1
CXCL12-205ENST00000395794 PKIGQ9Y2B9 76 aa8.8□□□□□ -1
CXCL12-205ENST00000395794 PANO1I0J062 215 aa8.79□□□□□ -1
CXCL12-205ENST00000395794 CD164L2Q6UWJ8 174 aa8.79□□□□□ -1
CXCL12-205ENST00000395794 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
CXCL12-205ENST00000395794 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
CXCL12-205ENST00000395794 KRTAP29-1A8MX34 341 aaPredicted RBP8.78□□□□□ -1
CXCL12-205ENST00000395794 C1orf196B1AJZ1 125 aa8.78□□□□□ -1
CXCL12-205ENST00000395794 MALP21145 153 aa8.78□□□□□ -1
CXCL12-205ENST00000395794 COX6A2Q02221 97 aa8.78□□□□□ -1
CXCL12-205ENST00000395794 CIRBPQ14011 172 aaKnown RBP8.78□□□□□ -1
CXCL12-205ENST00000395794 CSDC2Q9Y534 153 aaKnown RBP8.78□□□□□ -1
CXCL12-205ENST00000395794 ZNF561-AS1K7EIQ3 104 aa8.77□□□□□ -1.01
CXCL12-205ENST00000395794 TNFRSF6BO95407 300 aa8.77□□□□□ -1.01
CXCL12-205ENST00000395794 PPBPP02775 128 aa8.77□□□□□ -1.01
CXCL12-205ENST00000395794 CHTF8P0CG12 524 aa8.77□□□□□ -1.01
CXCL12-205ENST00000395794 KRTAP10-4P60372 401 aaPredicted RBP8.77□□□□□ -1.01
CXCL12-205ENST00000395794 SPACA4Q8TDM5 124 aa8.77□□□□□ -1.01
CXCL12-205ENST00000395794 UBE2D4Q9Y2X8 147 aa8.77□□□□□ -1.01
CXCL12-205ENST00000395794 A0A087WYN8 130 aa8.76□□□□□ -1.01
CXCL12-205ENST00000395794 D6R8Y8 96 aa8.76□□□□□ -1.01
CXCL12-205ENST00000395794 RPL32P62910 135 aaKnown RBP8.76□□□□□ -1.01
CXCL12-205ENST00000395794 LCE3BQ5TA77 95 aa8.76□□□□□ -1.01
CXCL12-205ENST00000395794 ATP5L2Q7Z4Y8 100 aa8.76□□□□□ -1.01
CXCL12-205ENST00000395794 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
CXCL12-205ENST00000395794 IGKV2-24A0A0C4DH68 120 aa8.75□□□□□ -1.01
CXCL12-205ENST00000395794 A0A1B0GXF2 115 aa8.75□□□□□ -1.01
CXCL12-205ENST00000395794 COX7A2LO14548 114 aa8.75□□□□□ -1.01
CXCL12-205ENST00000395794 PNRC1Q12796 327 aaPredicted RBP8.75□□□□□ -1.01
CXCL12-205ENST00000395794 MAJINQ3KP22 176 aa8.75□□□□□ -1.01
CXCL12-205ENST00000395794 C7orf33Q8WU49 177 aa8.75□□□□□ -1.01
CXCL12-205ENST00000395794 TIMM21Q9BVV7 248 aa8.75□□□□□ -1.01
CXCL12-205ENST00000395794 SMIM2Q9BVW6 85 aa8.75□□□□□ -1.01
CXCL12-205ENST00000395794 LINC00474Q9P2X8 69 aa8.75□□□□□ -1.01
CXCL12-205ENST00000395794 PHOX2AO14813 284 aa8.74□□□□□ -1.01
CXCL12-205ENST00000395794 OXTP01178 125 aa8.74□□□□□ -1.01
CXCL12-205ENST00000395794 MT-ND4LP03901 98 aa8.74□□□□□ -1.01
CXCL12-205ENST00000395794 RAB5AP20339 215 aa8.74□□□□□ -1.01
CXCL12-205ENST00000395794 RNASE13Q5GAN3 156 aaKnown RBP8.74□□□□□ -1.01
CXCL12-205ENST00000395794 ORMDL3Q8N138 153 aa8.74□□□□□ -1.01
CXCL12-205ENST00000395794 PRSS3P2Q8NHM4 247 aa8.74□□□□□ -1.01
CXCL12-205ENST00000395794 CARD19Q96LW7 228 aa8.74□□□□□ -1.01
CXCL12-205ENST00000395794 PLAC8Q9NZF1 115 aa8.74□□□□□ -1.01
CXCL12-205ENST00000395794 SYCNQ0VAF6 134 aa8.73□□□□□ -1.01
CXCL12-205ENST00000395794 TMEM136Q6ZRR5 245 aa8.73□□□□□ -1.01
CXCL12-205ENST00000395794 ANAPC16Q96DE5 110 aa8.73□□□□□ -1.01
CXCL12-205ENST00000395794 LINC00526Q96FQ7 95 aa8.73□□□□□ -1.01
CXCL12-205ENST00000395794 APOMO95445 188 aa8.72□□□□□ -1.01
CXCL12-205ENST00000395794 NPYP01303 97 aa8.72□□□□□ -1.01
CXCL12-205ENST00000395794 Q6ZUT4 128 aa8.72□□□□□ -1.01
CXCL12-205ENST00000395794 STPG4Q8N801 248 aa8.72□□□□□ -1.01
CXCL12-205ENST00000395794 PRELID3AQ96N28 172 aa8.72□□□□□ -1.01
CXCL12-205ENST00000395794 SPANXA1Q9NS26 97 aa8.72□□□□□ -1.01
CXCL12-205ENST00000395794 IGLV4-69A0A075B6H9 119 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms