RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 VCYO14598 125 aa11.35□□□□□ -0.59
PTBP1-204ENST00000394601 RHOHQ15669 191 aa11.35□□□□□ -0.59
PTBP1-204ENST00000394601 NIPBLQ6KC79 2804 aaeCLIP11.35□□□□□ -0.594e-6■■□□□ 12.3
PTBP1-204ENST00000394601 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.35□□□□□ -0.59
PTBP1-204ENST00000394601 hADV29S1A0JD25 119 aa11.35□□□□□ -0.59
PTBP1-204ENST00000394601 A8MTW9 85 aa11.35□□□□□ -0.59
PTBP1-204ENST00000394601 CD28P10747 220 aa11.35□□□□□ -0.59
PTBP1-204ENST00000394601 Q8N2B8 174 aa11.35□□□□□ -0.59
PTBP1-204ENST00000394601 TIMM21Q9BVV7 248 aa11.35□□□□□ -0.59
PTBP1-204ENST00000394601 SNRPD3P62318 126 aaKnown RBP11.34□□□□□ -0.59
PTBP1-204ENST00000394601 FAM208BQ5VWN6 2430 aa11.34□□□□□ -0.59
PTBP1-204ENST00000394601 TLN2Q9Y4G6 2542 aa11.34□□□□□ -0.59
PTBP1-204ENST00000394601 KRTAP1-3Q8IUG1 177 aa11.34□□□□□ -0.59
PTBP1-204ENST00000394601 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
PTBP1-204ENST00000394601 CSDC2Q9Y534 153 aaKnown RBP11.34□□□□□ -0.59
PTBP1-204ENST00000394601 IGHV1OR15-1A0A075B7D0 117 aa11.34□□□□□ -0.59
PTBP1-204ENST00000394601 I3L3M4 83 aa11.34□□□□□ -0.59
PTBP1-204ENST00000394601 IGHV3-30-3P0DP02 117 aa11.34□□□□□ -0.59
PTBP1-204ENST00000394601 LINC01587Q99440 93 aa11.34□□□□□ -0.59
PTBP1-204ENST00000394601 PRM2P04554 102 aa11.33□□□□□ -0.6
PTBP1-204ENST00000394601 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
PTBP1-204ENST00000394601 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
PTBP1-204ENST00000394601 IGHV3-38A0A0C4DH36 116 aa11.33□□□□□ -0.6
PTBP1-204ENST00000394601 IGKV3D-7A0A0C4DH55 119 aa11.32□□□□□ -0.6
PTBP1-204ENST00000394601 TIMM17AQ99595 171 aa11.32□□□□□ -0.6
PTBP1-204ENST00000394601 TENM4Q6N022 2769 aa11.32□□□□□ -0.6
PTBP1-204ENST00000394601 CHD6Q8TD26 2715 aa11.32□□□□□ -0.6
PTBP1-204ENST00000394601 RBMY1BA6NDE4 496 aaKnown RBP11.32□□□□□ -0.6
PTBP1-204ENST00000394601 RBMY1EA6NEQ0 496 aaKnown RBP11.32□□□□□ -0.6
PTBP1-204ENST00000394601 RBMY1DP0C7P1 496 aaKnown RBP11.32□□□□□ -0.6
PTBP1-204ENST00000394601 FAM104AQ969W3 186 aa11.32□□□□□ -0.6
PTBP1-204ENST00000394601 AMELXQ99217 191 aa11.32□□□□□ -0.6
PTBP1-204ENST00000394601 Q9HAA7 133 aa11.32□□□□□ -0.6
PTBP1-204ENST00000394601 SLURP1P55000 103 aa11.31□□□□□ -0.6
PTBP1-204ENST00000394601 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
PTBP1-204ENST00000394601 SDIM1Q6ZPB5 146 aa11.3□□□□□ -0.6
PTBP1-204ENST00000394601 TMEM141Q96I45 108 aa11.3□□□□□ -0.6
PTBP1-204ENST00000394601 LEPROTO15243 131 aa11.3□□□□□ -0.6
PTBP1-204ENST00000394601 PROK1P58294 105 aa11.3□□□□□ -0.6
PTBP1-204ENST00000394601 ZNF843Q8N446 348 aa11.3□□□□□ -0.6
PTBP1-204ENST00000394601 ITPR3Q14573 2671 aa11.29□□□□□ -0.6
PTBP1-204ENST00000394601 TMEM223A0PJW6 202 aa11.29□□□□□ -0.6
PTBP1-204ENST00000394601 NDUFA7O95182 113 aa11.29□□□□□ -0.6
PTBP1-204ENST00000394601 KIR2DL5BQ8NHK3 375 aa11.29□□□□□ -0.6
PTBP1-204ENST00000394601 NAV2Q8IVL1 2488 aa11.29□□□□□ -0.6
PTBP1-204ENST00000394601 A0A0B4J2C4 111 aa11.28□□□□□ -0.6
PTBP1-204ENST00000394601 DSCR8Q96T75 97 aa11.28□□□□□ -0.6
PTBP1-204ENST00000394601 FN1P02751 2386 aaKnown RBP11.28□□□□□ -0.6
PTBP1-204ENST00000394601 SMCR5Q8TEV8 140 aa11.28□□□□□ -0.6
PTBP1-204ENST00000394601 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.27□□□□□ -0.6
PTBP1-204ENST00000394601 IGKV2-29A2NJV5 120 aaPredicted RBP11.27□□□□□ -0.6
PTBP1-204ENST00000394601 HIST2H2BDQ6DRA6 164 aa11.27□□□□□ -0.6
PTBP1-204ENST00000394601 TMEM126AQ9H061 195 aa11.27□□□□□ -0.6
PTBP1-204ENST00000394601 PDZD2O15018 2839 aa11.27□□□□□ -0.61
PTBP1-204ENST00000394601 A0A087WVE0 104 aa11.27□□□□□ -0.61
PTBP1-204ENST00000394601 Q9UF83 564 aa11.27□□□□□ -0.61
PTBP1-204ENST00000394601 DEFB113Q30KQ7 82 aa11.26□□□□□ -0.61
PTBP1-204ENST00000394601 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
PTBP1-204ENST00000394601 Q6Q795 121 aa11.26□□□□□ -0.61
PTBP1-204ENST00000394601 DAZ4Q86SG3 579 aaKnown RBP11.26□□□□□ -0.61
PTBP1-204ENST00000394601 DAZ3Q9NR90 486 aaKnown RBP11.26□□□□□ -0.61
PTBP1-204ENST00000394601 EPG5Q9HCE0 2579 aa11.26□□□□□ -0.61
PTBP1-204ENST00000394601 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
PTBP1-204ENST00000394601 C3orf22Q8N5N4 141 aa11.26□□□□□ -0.61
PTBP1-204ENST00000394601 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
PTBP1-204ENST00000394601 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
PTBP1-204ENST00000394601 C20orf203Q8NBC4 194 aa11.24□□□□□ -0.61
PTBP1-204ENST00000394601 DEFB131AP59861 70 aa11.24□□□□□ -0.61
PTBP1-204ENST00000394601 DGAT2L7PQ6IED9 249 aa11.24□□□□□ -0.61
PTBP1-204ENST00000394601 TMEM61Q8N0U2 210 aa11.24□□□□□ -0.61
PTBP1-204ENST00000394601 LRRC75A-AS1Q8N1F1 130 aa11.24□□□□□ -0.61
PTBP1-204ENST00000394601 HIST1H4AP62805 103 aaKnown RBP11.24□□□□□ -0.61
PTBP1-204ENST00000394601 Q6ZSN1 163 aa11.24□□□□□ -0.61
PTBP1-204ENST00000394601 C4orf3Q8WVX3 66 aa11.24□□□□□ -0.61
PTBP1-204ENST00000394601 CYSTM1Q9H1C7 97 aa11.24□□□□□ -0.61
PTBP1-204ENST00000394601 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
PTBP1-204ENST00000394601 HRCT1Q6UXD1 115 aa11.23□□□□□ -0.61
PTBP1-204ENST00000394601 IGLV4-3A0A075B6K6 122 aa11.23□□□□□ -0.61
PTBP1-204ENST00000394601 BAALC-AS2P0C853 105 aa11.23□□□□□ -0.61
PTBP1-204ENST00000394601 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
PTBP1-204ENST00000394601 A0A1B0GX51 115 aa11.22□□□□□ -0.61
PTBP1-204ENST00000394601 SETXQ7Z333 2677 aaKnown RBP11.22□□□□□ -0.61
PTBP1-204ENST00000394601 TINCRA0A1B0GVN0 87 aa11.22□□□□□ -0.61
PTBP1-204ENST00000394601 H3BT86 120 aa11.22□□□□□ -0.61
PTBP1-204ENST00000394601 LST1O00453 97 aa11.22□□□□□ -0.61
PTBP1-204ENST00000394601 DNAJC30Q96LL9 226 aa11.22□□□□□ -0.61
PTBP1-204ENST00000394601 Q96MF0 132 aa11.22□□□□□ -0.61
PTBP1-204ENST00000394601 J3KT08 172 aa11.21□□□□□ -0.61
PTBP1-204ENST00000394601 C5orf47Q569G3 176 aa11.21□□□□□ -0.61
PTBP1-204ENST00000394601 MAP6D1Q9H9H5 199 aa11.21□□□□□ -0.62
PTBP1-204ENST00000394601 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
PTBP1-204ENST00000394601 UQCRQO14949 82 aa11.2□□□□□ -0.62
PTBP1-204ENST00000394601 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
PTBP1-204ENST00000394601 DEFB114Q30KQ6 69 aa11.19□□□□□ -0.62
PTBP1-204ENST00000394601 Q9H8V8 135 aa11.19□□□□□ -0.62
PTBP1-204ENST00000394601 PIK3CD-AS1Q5SR53 167 aa11.19□□□□□ -0.62
PTBP1-204ENST00000394601 WFDC9Q8NEX5 89 aa11.18□□□□□ -0.62
PTBP1-204ENST00000394601 C14orf132Q9NPU4 83 aa11.18□□□□□ -0.62
PTBP1-204ENST00000394601 CDKN2A-AS1Q9UH64 79 aa11.18□□□□□ -0.62
PTBP1-204ENST00000394601 CIRBPQ14011 172 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms