RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 CRLF1O75462 422 aa14.14□□□□□ -0.15
RCCD1-201ENST00000394258 MUSTN1Q8IVN3 82 aa14.14□□□□□ -0.15
RCCD1-201ENST00000394258 CHCHD7Q9BUK0 85 aa14.14□□□□□ -0.15
RCCD1-201ENST00000394258 PDZD2O15018 2839 aa14.13□□□□□ -0.15
RCCD1-201ENST00000394258 C1orf158Q8N1D5 194 aa14.13□□□□□ -0.15
RCCD1-201ENST00000394258 LINC00467Q9BRT7 94 aa14.13□□□□□ -0.15
RCCD1-201ENST00000394258 IGHV3-53P01767 116 aa14.13□□□□□ -0.15
RCCD1-201ENST00000394258 IGHV3-30-3P0DP02 117 aa14.13□□□□□ -0.15
RCCD1-201ENST00000394258 EDA2RQ9HAV5 297 aa14.13□□□□□ -0.15
RCCD1-201ENST00000394258 YAE1D1Q9NRH1 226 aa14.13□□□□□ -0.15
RCCD1-201ENST00000394258 TRGV1A0A0A0MS02 117 aa14.12□□□□□ -0.15
RCCD1-201ENST00000394258 SLC25A20O43772 301 aa14.12□□□□□ -0.15
RCCD1-201ENST00000394258 TRAV4A0A0B4J268 109 aa14.12□□□□□ -0.15
RCCD1-201ENST00000394258 NHLRC4P0CG21 123 aaPredicted RBP14.12□□□□□ -0.15
RCCD1-201ENST00000394258 PRO1854Q9UHT4 67 aa14.12□□□□□ -0.15
RCCD1-201ENST00000394258 PYGO1Q9Y3Y4 419 aa14.12□□□□□ -0.15
RCCD1-201ENST00000394258 WFDC10AQ9H1F0 79 aa14.11□□□□□ -0.15
RCCD1-201ENST00000394258 A0A0J9YXY3 114 aa14.1□□□□□ -0.15
RCCD1-201ENST00000394258 UBE2D4Q9Y2X8 147 aa14.1□□□□□ -0.15
RCCD1-201ENST00000394258 GAGE5Q13069 117 aa14.1□□□□□ -0.15
RCCD1-201ENST00000394258 GAGE6Q13070 117 aa14.1□□□□□ -0.15
RCCD1-201ENST00000394258 TIMM21Q9BVV7 248 aa14.1□□□□□ -0.15
RCCD1-201ENST00000394258 BEAN1Q3B7T3 259 aa14.09□□□□□ -0.15
RCCD1-201ENST00000394258 MRPS36P82909 103 aaKnown RBP14.09□□□□□ -0.15
RCCD1-201ENST00000394258 LYRM7Q5U5X0 104 aa14.09□□□□□ -0.15
RCCD1-201ENST00000394258 LINC01006Q8NI28 216 aa14.09□□□□□ -0.15
RCCD1-201ENST00000394258 NTN5Q8WTR8 489 aaPredicted RBP14.09□□□□□ -0.15
RCCD1-201ENST00000394258 RS1O15537 224 aa14.08□□□□□ -0.15
RCCD1-201ENST00000394258 PIK3CD-AS1Q5SR53 167 aa14.08□□□□□ -0.15
RCCD1-201ENST00000394258 NOTCH2Q04721 2471 aa14.08□□□□□ -0.16
RCCD1-201ENST00000394258 Q6ZTI0 123 aa14.08□□□□□ -0.16
RCCD1-201ENST00000394258 CCDC179H3BU77 68 aa14.08□□□□□ -0.16
RCCD1-201ENST00000394258 SBSPONQ8IVN8 264 aa14.08□□□□□ -0.16
RCCD1-201ENST00000394258 NPC2P61916 151 aa14.07□□□□□ -0.16
RCCD1-201ENST00000394258 TMEM263Q8WUH6 116 aaKnown RBP14.07□□□□□ -0.16
RCCD1-201ENST00000394258 Q1RN00 199 aa14.07□□□□□ -0.16
RCCD1-201ENST00000394258 ADAMTSL4-AS1Q5T5F5 129 aa14.07□□□□□ -0.16
RCCD1-201ENST00000394258 FASNP49327 2511 aaKnown RBP14.07□□□□□ -0.16
RCCD1-201ENST00000394258 TRAV25A0A0B4J276 109 aa14.06□□□□□ -0.16
RCCD1-201ENST00000394258 TEX49A0A1B0GTD5 131 aa14.06□□□□□ -0.16
RCCD1-201ENST00000394258 IGHV3-33P01772 117 aa14.06□□□□□ -0.16
RCCD1-201ENST00000394258 KRTAP1-1Q07627 177 aa14.06□□□□□ -0.16
RCCD1-201ENST00000394258 GAGE2BQ13066 116 aa14.06□□□□□ -0.16
RCCD1-201ENST00000394258 GAGE2EQ4V326 116 aa14.06□□□□□ -0.16
RCCD1-201ENST00000394258 CITED1Q99966 193 aa14.06□□□□□ -0.16
RCCD1-201ENST00000394258 GAGE2DQ9UEU5 116 aa14.06□□□□□ -0.16
RCCD1-201ENST00000394258 PRSS2P07478 247 aa14.05□□□□□ -0.16
RCCD1-201ENST00000394258 LITAFQ99732 161 aa14.05□□□□□ -0.16
RCCD1-201ENST00000394258 SPANXA1Q9NS26 97 aa14.05□□□□□ -0.16
RCCD1-201ENST00000394258 SNCGO76070 127 aa14.05□□□□□ -0.16
RCCD1-201ENST00000394258 RPL35AP18077 110 aaKnown RBP14.05□□□□□ -0.16
RCCD1-201ENST00000394258 DGAT2L7PQ6IED9 249 aa14.05□□□□□ -0.16
RCCD1-201ENST00000394258 FN1P02751 2386 aaKnown RBP14.04□□□□□ -0.16
RCCD1-201ENST00000394258 UNC79Q9P2D8 2635 aa14.04□□□□□ -0.16
RCCD1-201ENST00000394258 IGHV1-58A0A0C4DH39 117 aa14.04□□□□□ -0.16
RCCD1-201ENST00000394258 TMEM262E9PQX1 116 aa14.04□□□□□ -0.16
RCCD1-201ENST00000394258 DNAJC30Q96LL9 226 aa14.04□□□□□ -0.16
RCCD1-201ENST00000394258 NOP10Q9NPE3 64 aaKnown RBP14.04□□□□□ -0.16
RCCD1-201ENST00000394258 NDUFV3P56181 108 aaKnown RBP14.03□□□□□ -0.16
RCCD1-201ENST00000394258 NDUFA12Q9UI09 145 aa14.03□□□□□ -0.16
RCCD1-201ENST00000394258 HIVEP2P31629 2446 aa14.02□□□□□ -0.16
RCCD1-201ENST00000394258 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.02□□□□□ -0.16
RCCD1-201ENST00000394258 TINCRA0A1B0GVN0 87 aa14.02□□□□□ -0.17
RCCD1-201ENST00000394258 NDUFA7O95182 113 aa14.02□□□□□ -0.17
RCCD1-201ENST00000394258 LINC00694P0DN24 101 aa14.02□□□□□ -0.17
RCCD1-201ENST00000394258 VSIG2Q96IQ7 327 aa14.02□□□□□ -0.17
RCCD1-201ENST00000394258 CDKN2A-AS1Q9UH64 79 aa14.02□□□□□ -0.17
RCCD1-201ENST00000394258 PLA2G2AP14555 144 aa14.01□□□□□ -0.17
RCCD1-201ENST00000394258 TTC32Q5I0X7 151 aa14.01□□□□□ -0.17
RCCD1-201ENST00000394258 SHISA2Q6UWI4 295 aa14.01□□□□□ -0.17
RCCD1-201ENST00000394258 DAND5Q8N907 189 aa14□□□□□ -0.17
RCCD1-201ENST00000394258 GAGE12JA6NER3 117 aa14□□□□□ -0.17
RCCD1-201ENST00000394258 GIG44P09565 113 aaPredicted RBP14□□□□□ -0.17
RCCD1-201ENST00000394258 GAGE4Q13068 117 aa14□□□□□ -0.17
RCCD1-201ENST00000394258 C3orf56Q8N813 242 aa14□□□□□ -0.17
RCCD1-201ENST00000394258 COX6A2Q02221 97 aa13.99□□□□□ -0.17
RCCD1-201ENST00000394258 SMR3AQ99954 134 aa13.99□□□□□ -0.17
RCCD1-201ENST00000394258 A0A0B4J2C4 111 aa13.99□□□□□ -0.17
RCCD1-201ENST00000394258 IL17DQ8TAD2 202 aa13.98□□□□□ -0.17
RCCD1-201ENST00000394258 ANK3Q12955 4377 aaKnown RBP13.98□□□□□ -0.17
RCCD1-201ENST00000394258 RNASE1P07998 156 aaKnown RBP13.98□□□□□ -0.17
RCCD1-201ENST00000394258 SMIM20Q8N5G0 67 aa13.98□□□□□ -0.17
RCCD1-201ENST00000394258 GAGE7O76087 117 aa13.98□□□□□ -0.17
RCCD1-201ENST00000394258 GAGE12FP0CL80 117 aa13.98□□□□□ -0.17
RCCD1-201ENST00000394258 GAGE12GP0CL81 117 aa13.98□□□□□ -0.17
RCCD1-201ENST00000394258 GAGE12IP0CL82 117 aa13.98□□□□□ -0.17
RCCD1-201ENST00000394258 RPL36AP83881 106 aaKnown RBP13.98□□□□□ -0.17
RCCD1-201ENST00000394258 RPL36ALQ969Q0 106 aaKnown RBP13.98□□□□□ -0.17
RCCD1-201ENST00000394258 HECTD1Q9ULT8 2610 aa13.97□□□□□ -0.17
RCCD1-201ENST00000394258 K7EQD1 137 aa13.97□□□□□ -0.17
RCCD1-201ENST00000394258 NTM-AS1Q6ZSK4 140 aa13.97□□□□□ -0.17
RCCD1-201ENST00000394258 C15orf53Q8NAA6 179 aa13.97□□□□□ -0.17
RCCD1-201ENST00000394258 IFITM1P13164 125 aa13.97□□□□□ -0.17
RCCD1-201ENST00000394258 LINC01620Q4KN68 170 aa13.97□□□□□ -0.17
RCCD1-201ENST00000394258 TRAV13-1A0A0B4J241 112 aa13.96□□□□□ -0.17
RCCD1-201ENST00000394258 TRGV2A0A075B6R0 118 aa13.96□□□□□ -0.18
RCCD1-201ENST00000394258 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.96□□□□□ -0.18
RCCD1-201ENST00000394258 NBEAL2Q6ZNJ1 2754 aa13.95□□□□□ -0.18
RCCD1-201ENST00000394258 TRAV8-4A0A0B4J246 113 aa13.95□□□□□ -0.18
RCCD1-201ENST00000394258 TRIAP1O43715 76 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms