RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TMEM101Q96IK0 257 aa10.94□□□□□ -0.66
SNRPA1-202ENST00000394082 A0A096LNI7 61 aa10.93□□□□□ -0.66
SNRPA1-202ENST00000394082 LINC00959A0A1B0GUT2 108 aa10.93□□□□□ -0.66
SNRPA1-202ENST00000394082 PMCHP20382 165 aa10.93□□□□□ -0.66
SNRPA1-202ENST00000394082 PEA15Q15121 130 aa10.93□□□□□ -0.66
SNRPA1-202ENST00000394082 SPINK6Q6UWN8 80 aa10.93□□□□□ -0.66
SNRPA1-202ENST00000394082 GATCO43716 136 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-202ENST00000394082 MRPL52Q86TS9 123 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-202ENST00000394082 A0A0J9YXV3 536 aa10.91□□□□□ -0.66
SNRPA1-202ENST00000394082 XCL1P47992 114 aa10.91□□□□□ -0.66
SNRPA1-202ENST00000394082 RAB14P61106 215 aa10.91□□□□□ -0.66
SNRPA1-202ENST00000394082 MRAP2Q96G30 205 aa10.91□□□□□ -0.66
SNRPA1-202ENST00000394082 CCL25O15444 150 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 TSHBP01222 138 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 SS18Q15532 418 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 FAM74A3Q4VXF1 159 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 CD164L2Q6UWJ8 174 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 LINC01551Q86U37 167 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 CARD19Q96LW7 228 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 SMDT1Q9H4I9 107 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 ST20Q9HBF5 79 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 CDC42SE2Q9NRR3 84 aa10.9□□□□□ -0.66
SNRPA1-202ENST00000394082 TRBV27A0A0K0K1C4 114 aa10.89□□□□□ -0.67
SNRPA1-202ENST00000394082 POLR2KP53803 58 aaKnown RBP10.89□□□□□ -0.67
SNRPA1-202ENST00000394082 KRTAP10-8P60410 259 aa10.89□□□□□ -0.67
SNRPA1-202ENST00000394082 SRSF9Q13242 221 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNRPA1-202ENST00000394082 REG3GQ6UW15 175 aa10.89□□□□□ -0.67
SNRPA1-202ENST00000394082 BORCS7Q96B45 105 aa10.89□□□□□ -0.67
SNRPA1-202ENST00000394082 TMEM191AQ9H0A3 160 aa10.89□□□□□ -0.67
SNRPA1-202ENST00000394082 TMEM241Q24JQ0 296 aa10.88□□□□□ -0.67
SNRPA1-202ENST00000394082 Q6ZRP5 223 aa10.88□□□□□ -0.67
SNRPA1-202ENST00000394082 ZNF561-AS1K7EIQ3 104 aa10.87□□□□□ -0.67
SNRPA1-202ENST00000394082 SYCNQ0VAF6 134 aa10.87□□□□□ -0.67
SNRPA1-202ENST00000394082 ZNF664Q8N3J9 261 aa10.87□□□□□ -0.67
SNRPA1-202ENST00000394082 CSDC2Q9Y534 153 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-202ENST00000394082 A0A1B0GUT8 65 aa10.86□□□□□ -0.67
SNRPA1-202ENST00000394082 C7orf77A4D0Y5 90 aa10.86□□□□□ -0.67
SNRPA1-202ENST00000394082 SRSF3P84103 164 aaKnown RBP10.86□□□□□ -0.67
SNRPA1-202ENST00000394082 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
SNRPA1-202ENST00000394082 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
SNRPA1-202ENST00000394082 OSTCQ9NRP0 149 aa10.86□□□□□ -0.67
SNRPA1-202ENST00000394082 TMEM242Q9NWH2 141 aa10.86□□□□□ -0.67
SNRPA1-202ENST00000394082 NAT8Q9UHE5 227 aa10.86□□□□□ -0.67
SNRPA1-202ENST00000394082 RNF213Q63HN8 5207 aa10.85□□□□□ -0.67
SNRPA1-202ENST00000394082 C9JQL5 133 aa10.85□□□□□ -0.67
SNRPA1-202ENST00000394082 GAS8-AS1O95177 125 aa10.85□□□□□ -0.67
SNRPA1-202ENST00000394082 PTTG1IPP53801 180 aa10.85□□□□□ -0.67
SNRPA1-202ENST00000394082 SMAGPQ0VAQ4 97 aa10.85□□□□□ -0.67
SNRPA1-202ENST00000394082 ADIRFQ15847 76 aa10.85□□□□□ -0.67
SNRPA1-202ENST00000394082 HIGD1CA8MV81 97 aa10.84□□□□□ -0.67
SNRPA1-202ENST00000394082 C1orf196B1AJZ1 125 aa10.84□□□□□ -0.67
SNRPA1-202ENST00000394082 PPP1R17O96001 155 aa10.84□□□□□ -0.67
SNRPA1-202ENST00000394082 RAB4AP20338 218 aa10.84□□□□□ -0.67
SNRPA1-202ENST00000394082 CAMPP49913 170 aa10.84□□□□□ -0.67
SNRPA1-202ENST00000394082 LINC00526Q96FQ7 95 aa10.84□□□□□ -0.67
SNRPA1-202ENST00000394082 LOC107984640A0A0U1RRK4 108 aa10.83□□□□□ -0.68
SNRPA1-202ENST00000394082 VCYO14598 125 aa10.83□□□□□ -0.68
SNRPA1-202ENST00000394082 RPL23P62829 140 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-202ENST00000394082 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
SNRPA1-202ENST00000394082 COX7A2LO14548 114 aa10.81□□□□□ -0.68
SNRPA1-202ENST00000394082 NUP35Q8NFH5 326 aa10.81□□□□□ -0.68
SNRPA1-202ENST00000394082 C2orf48Q96LS8 159 aa10.81□□□□□ -0.68
SNRPA1-202ENST00000394082 MALP21145 153 aa10.8□□□□□ -0.68
SNRPA1-202ENST00000394082 AMN1Q8IY45 258 aa10.8□□□□□ -0.68
SNRPA1-202ENST00000394082 UBE2D4Q9Y2X8 147 aa10.8□□□□□ -0.68
SNRPA1-202ENST00000394082 V9GYV3 84 aa10.8□□□□□ -0.68
SNRPA1-202ENST00000394082 APOMO95445 188 aa10.79□□□□□ -0.68
SNRPA1-202ENST00000394082 FCER1GP30273 86 aa10.79□□□□□ -0.68
SNRPA1-202ENST00000394082 SUMO2P61956 95 aaKnown RBP10.79□□□□□ -0.68
SNRPA1-202ENST00000394082 CLLU1Q5K131 121 aa10.79□□□□□ -0.68
SNRPA1-202ENST00000394082 KIR2DL4Q99706 377 aa10.79□□□□□ -0.68
SNRPA1-202ENST00000394082 TIMM21Q9BVV7 248 aa10.79□□□□□ -0.68
SNRPA1-202ENST00000394082 PPP1R2P9O14990 202 aa10.78□□□□□ -0.68
SNRPA1-202ENST00000394082 RIGQ13278 110 aa10.78□□□□□ -0.68
SNRPA1-202ENST00000394082 RNF151Q2KHN1 245 aa10.78□□□□□ -0.68
SNRPA1-202ENST00000394082 NRACQ8N912 160 aa10.78□□□□□ -0.68
SNRPA1-202ENST00000394082 GAGE2BQ13066 116 aa10.77□□□□□ -0.69
SNRPA1-202ENST00000394082 CAMK2N2Q96S95 79 aa10.77□□□□□ -0.69
SNRPA1-202ENST00000394082 NAT8BQ9UHF3 227 aa10.77□□□□□ -0.69
SNRPA1-202ENST00000394082 A0A1W2PNN7 141 aa10.76□□□□□ -0.69
SNRPA1-202ENST00000394082 TMEM18Q96B42 140 aa10.76□□□□□ -0.69
SNRPA1-202ENST00000394082 F8WDY8 70 aa10.75□□□□□ -0.69
SNRPA1-202ENST00000394082 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.75□□□□□ -0.69
SNRPA1-202ENST00000394082 TCAPO15273 167 aa10.75□□□□□ -0.69
SNRPA1-202ENST00000394082 RPL32P62910 135 aaKnown RBP10.75□□□□□ -0.69
SNRPA1-202ENST00000394082 ODF1Q14990 250 aa10.75□□□□□ -0.69
SNRPA1-202ENST00000394082 TRBV24-1A0A075B6N3 115 aa10.74□□□□□ -0.69
SNRPA1-202ENST00000394082 LINC00862A6NCI5 91 aa10.74□□□□□ -0.69
SNRPA1-202ENST00000394082 IFITM2Q01629 132 aa10.74□□□□□ -0.69
SNRPA1-202ENST00000394082 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
SNRPA1-202ENST00000394082 OR10D4PQ8NGN7 298 aa10.74□□□□□ -0.69
SNRPA1-202ENST00000394082 C20orf78Q9BR46 151 aa10.74□□□□□ -0.69
SNRPA1-202ENST00000394082 TRAV13-1A0A0B4J241 112 aa10.73□□□□□ -0.69
SNRPA1-202ENST00000394082 PNRC1Q12796 327 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-202ENST00000394082 FAM104BQ5XKR9 115 aa10.73□□□□□ -0.69
SNRPA1-202ENST00000394082 PSORS1C2Q9UIG4 136 aa10.73□□□□□ -0.69
SNRPA1-202ENST00000394082 SMIM27A0A1W2PRY6 76 aa10.72□□□□□ -0.69
SNRPA1-202ENST00000394082 SMKR1H3BMG3 65 aa10.72□□□□□ -0.69
SNRPA1-202ENST00000394082 MRPL35Q9NZE8 188 aaKnown RBP10.72□□□□□ -0.69
SNRPA1-202ENST00000394082 A0A1B0GW15 77 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms