RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ABCA6Q8N139 1617 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 RAPGEF6Q8TEU7 1601 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 KIAA1549LQ6ZVL6 1849 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 SDK1Q7Z5N4 2213 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 FREM1Q5H8C1 2179 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 CLASP1Q7Z460 1538 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 ASXL1Q8IXJ9 1541 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 PDCD11Q14690 1871 aaKnown RBP0.95□□□□□ -2.26
TRAV40-201ENST00000390467 CLTCQ00610 1675 aaKnown RBP0.95□□□□□ -2.26
TRAV40-201ENST00000390467 ZFHX2Q9C0A1 2572 aaPredicted RBP0.95□□□□□ -2.26
TRAV40-201ENST00000390467 TRAV23DV6A0A075B6W5 121 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 TMSB15BA0A087X1C1 80 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 TRBV10-1A0A0K0K1A3 114 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 LOC101927531A0A1B0GV80 90 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 TMEM30CPA0ZSE6 113 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 CLPSL1A2RUU4 121 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 C2orf70A6NJV1 201 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 IQCF6A8MYZ5 107 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 F8WEM9 126 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 CHKB-CPT1BH3BT56 60 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 FXYD1O00168 92 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 HMGN2P05204 90 aaKnown RBP0.95□□□□□ -2.26
TRAV40-201ENST00000390467 COX6CP09669 75 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 UBE2D1P51668 147 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 EDDM3BP56851 147 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 CNBPP62633 177 aaKnown RBP0.95□□□□□ -2.26
TRAV40-201ENST00000390467 ERHP84090 104 aaKnown RBP0.95□□□□□ -2.26
TRAV40-201ENST00000390467 PSMG4Q5JS54 123 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 C1orf137Q5JT78 98 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 CSAG1Q6PB30 78 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 SFTA2Q6UW10 78 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 C2orf82Q6UX34 121 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 SMIM5Q71RC9 77 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 CLECL1Q8IZS7 167 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 C20orf197Q8N268 126 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 DYNLRB1Q9NP97 96 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 CDC42SE2Q9NRR3 84 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 PSENENQ9NZ42 101 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 MYO3AQ8NEV4 1616 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 GLI2P10070 1586 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 TIAM1Q13009 1591 aa0.95□□□□□ -2.26
TRAV40-201ENST00000390467 ITSN2Q9NZM3 1697 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 ADAMTS7Q9UKP4 1686 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 INTS1Q8N201 2190 aaKnown RBP0.94□□□□□ -2.26
TRAV40-201ENST00000390467 AFDNP55196 1824 aaKnown RBP0.94□□□□□ -2.26
TRAV40-201ENST00000390467 KDM6BO15054 1643 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 RNF17Q9BXT8 1623 aaKnown RBP0.94□□□□□ -2.26
TRAV40-201ENST00000390467 SIPA1L3O60292 1781 aaPredicted RBP0.94□□□□□ -2.26
TRAV40-201ENST00000390467 LAMB2P55268 1798 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 IGLV3-32A0A0A0MS00 114 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 TRBV6-8A0A0A6YYG3 113 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 MYMXA0A1B0GTQ4 84 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 LOC285095A0A1B0GVY8 99 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 A0A1B0GWA3 101 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 GCHFRP30047 84 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 PDE6HQ13956 83 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 C6orf201Q7Z4U5 140 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 Q9BRP9 147 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 PROK2Q9HC23 129 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 TMEM14BQ9NUH8 114 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 MRPL36Q9P0J6 103 aaKnown RBP0.94□□□□□ -2.26
TRAV40-201ENST00000390467 PRO2289Q9P1D8 64 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 PSORS1C2Q9UIG4 136 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 HILPDAQ9Y5L2 63 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 V9GYH0 126 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 XRN1Q8IZH2 1706 aaKnown RBP0.94□□□□□ -2.26
TRAV40-201ENST00000390467 ALPK2Q86TB3 2170 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 BRWD1Q9NSI6 2320 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 HELZ2Q9BYK8 2649 aaKnown RBP0.94□□□□□ -2.26
TRAV40-201ENST00000390467 HMGXB3Q12766 1538 aa0.94□□□□□ -2.26
TRAV40-201ENST00000390467 GBF1Q92538 1859 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 A0A0J9YY99 117 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 NUPR2A6NF83 97 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 ZNF815PA8K554 130 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 CEBPZOSA8MTT3 80 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 SNRPGP15A8MWD9 76 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 PSCAO43653 123 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 IGHV3-30P01768 117 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 IGHV3-30-5P0DP03 117 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 PLGLAQ15195 96 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 Q6JHZ5 121 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 DMAC1Q96GE9 116 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 HIGD2AQ9BW72 106 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 NDUFA4L2Q9NRX3 87 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 UBE2D4Q9Y2X8 147 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 LAMA4Q16363 1823 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 MED13LQ71F56 2210 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 LRRC7Q96NW7 1537 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 SYCP2Q9BX26 1530 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 PIK3C2BO00750 1634 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 LAMC1P11047 1609 aa0.93□□□□□ -2.26
TRAV40-201ENST00000390467 CD163L1Q9NR16 1453 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 FN1P02751 2386 aaKnown RBP0.92□□□□□ -2.26
TRAV40-201ENST00000390467 PCDH15Q96QU1 1955 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 MROH2AA6NES4 1674 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 IGKV3-7A0A075B6H7 116 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 FXYD6-FXYD2A0A087WZ82 144 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 TRBV6-7A0A0A0MS04 114 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 A0A0D9SFI3 127 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 HIGD1CA8MV81 97 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms