RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 NAPAP54920 295 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 DAOAP59103 153 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 ARF5P84085 180 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 AESQ08117 197 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 ITGB3BPQ13352 177 aaPredicted RBP-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 C1DQ13901 141 aaKnown RBP-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 PSMG4Q5JS54 123 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 RPL7L1Q6DKI1 246 aaKnown RBP-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 DCUN1D2Q6PH85 259 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 ARPINQ7Z6K5 226 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 CMC1Q7Z7K0 106 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 BLIDQ8IZY5 108 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 SPICQ8N5J4 248 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 OCC1Q8TAD7 63 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 OR8D1Q8WZ84 308 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 FAM3CQ92520 227 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 CALN1Q9BXU9 219 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 C20orf27Q9GZN8 174 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 PRTFDC1Q9NRG1 225 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 SDHAF3Q9NRP4 125 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 FIS1Q9Y3D6 152 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 AP4S1Q9Y587 144 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 V9GYH0 126 aa-2.34□□□□□ -2.78
RNU6-540P-201ENST00000384622 CRYM-AS1A6NIL9 109 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 TMEM210A6NLX4 147 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 LRRC30A6NM36 301 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 COX7A2LO14548 114 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 CYTH3O43739 400 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 BCAS2O75934 225 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 CRYZL1O95825 349 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 RPL35P42766 123 aaKnown RBP-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 TTPAP49638 278 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 FABP6P51161 128 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 STC1P52823 247 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 RAB11AP62491 216 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 GNGT1P63211 74 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 S100A12P80511 92 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 RIPPLY1Q0D2K3 151 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 TSNQ15631 228 aaKnown RBP-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 GCSAMLQ5JQS6 135 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 KRBOX4Q5JUW0 171 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 UBE2NLQ5JXB2 153 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 MFSD14CQ5VZR4 134 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 PPP1R42Q7Z4L9 355 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 BPIFA4PQ86YQ2 179 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 SYCE1Q8N0S2 351 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 CBR4Q8N4T8 237 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 COMMD1Q8N668 190 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 CCDC126Q96EE4 140 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 C20orf78Q9BR46 151 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 TMEM43Q9BTV4 400 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 FTHL17Q9BXU8 183 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 RPF2Q9H7B2 306 aaKnown RBP-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 SYNCQ9H7C4 482 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 NXT2Q9NPJ8 142 aaKnown RBP-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 IQGAP1P46940 1657 aa-2.35□□□□□ -2.79
RNU6-540P-201ENST00000384622 ANKRD30AQ9BXX3 1397 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 ABCC2Q92887 1545 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 MYO5CQ9NQX4 1742 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 MROH2AA6NES4 1674 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 A0A0B4J2E0 115 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 A0A1B0GX12 115 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 A0A1B0GX78 115 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 C7orf71A4D174 169 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 ARL5CA6NH57 179 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 CCDC169A6NNP5 214 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 H3BUX3 64 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 EDF1O60869 148 aaKnown RBP-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 ORM1P02763 201 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 SCGB1C2P0DMR2 95 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 IL11P20809 199 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 CSN1S1P47710 185 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 CASP4P49662 377 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 POLR2JP52435 117 aaKnown RBP-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 DEFB131AP59861 70 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 ARF3P61204 181 aaPredicted RBP-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 ARF1P84077 181 aaKnown RBP-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 ADIGQ0VDE8 80 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 C2orf76Q3KRA6 126 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 Q3ZCU0 254 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 RIPPLY2Q5TAB7 128 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 RESP18Q5W5W9 173 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 CTAGE3PQ8IX95 158 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 TCTE3Q8IZS6 198 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 FNDC5Q8NAU1 212 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 SCGB1C1Q8TD33 95 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 CDKN2AIPNLQ96HQ2 116 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 CCDC77Q9BR77 488 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 CST11Q9H112 138 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 ARV1Q9H2C2 271 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 NCOR1P1Q9H4R4 102 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 ENY2Q9NPA8 101 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 COMMD9Q9P000 198 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 TOMM7Q9P0U1 55 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 NXT1Q9UKK6 140 aaKnown RBP-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 GOLT1BQ9Y3E0 138 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 RB1CC1Q8TDY2 1594 aa-2.36□□□□□ -2.79
RNU6-540P-201ENST00000384622 TRAV13-2A0A0B4J235 113 aa-2.37□□□□□ -2.79
RNU6-540P-201ENST00000384622 FABP12A6NFH5 140 aa-2.37□□□□□ -2.79
RNU6-540P-201ENST00000384622 NDUFA1O15239 70 aa-2.37□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms