RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 RBMY1BA6NDE4 496 aaKnown RBP13.82□□□□□ -0.2
SMARCD1-201ENST00000381513 RBMY1EA6NEQ0 496 aaKnown RBP13.82□□□□□ -0.2
SMARCD1-201ENST00000381513 RBMY1DP0C7P1 496 aaKnown RBP13.82□□□□□ -0.2
SMARCD1-201ENST00000381513 RBMY1A1P0DJD3 496 aaKnown RBP13.82□□□□□ -0.2
SMARCD1-201ENST00000381513 RBMY1CP0DJD4 496 aa13.82□□□□□ -0.2
SMARCD1-201ENST00000381513 RBMY1FQ15415 496 aaKnown RBP13.82□□□□□ -0.2
SMARCD1-201ENST00000381513 PRO0628Q9UI54 55 aa13.82□□□□□ -0.2
SMARCD1-201ENST00000381513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.82□□□□□ -0.22e-8■■■■□ 23.4
SMARCD1-201ENST00000381513 BDP1A6H8Y1 2624 aa13.81□□□□□ -0.2
SMARCD1-201ENST00000381513 RPL35AP18077 110 aaKnown RBP13.81□□□□□ -0.2
SMARCD1-201ENST00000381513 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.81□□□□□ -0.2
SMARCD1-201ENST00000381513 UBE2D4Q9Y2X8 147 aa13.81□□□□□ -0.2
SMARCD1-201ENST00000381513 LINC00467Q9BRT7 94 aa13.81□□□□□ -0.2
SMARCD1-201ENST00000381513 FAM236DA0A1B0GTK5 79 aa13.8□□□□□ -0.2
SMARCD1-201ENST00000381513 FAM236CP0DP71 79 aa13.8□□□□□ -0.2
SMARCD1-201ENST00000381513 COX6A2Q02221 97 aa13.8□□□□□ -0.2
SMARCD1-201ENST00000381513 A0A087WYN8 130 aa13.8□□□□□ -0.2
SMARCD1-201ENST00000381513 EDN2P20800 178 aa13.8□□□□□ -0.2
SMARCD1-201ENST00000381513 SAA4P35542 130 aa13.8□□□□□ -0.2
SMARCD1-201ENST00000381513 PIMREGQ9BSJ6 248 aa13.8□□□□□ -0.2
SMARCD1-201ENST00000381513 WFDC11Q8NEX6 87 aa13.79□□□□□ -0.2
SMARCD1-201ENST00000381513 ASH1LQ9NR48 2969 aaKnown RBP13.79□□□□□ -0.2
SMARCD1-201ENST00000381513 NDUFC2O95298 119 aa13.78□□□□□ -0.2
SMARCD1-201ENST00000381513 SLPIP03973 132 aa13.77□□□□□ -0.2
SMARCD1-201ENST00000381513 LECT2O14960 151 aa13.77□□□□□ -0.21
SMARCD1-201ENST00000381513 DCHS2Q6V1P9 2916 aa13.77□□□□□ -0.21
SMARCD1-201ENST00000381513 ZFP36P26651 326 aaKnown RBP13.76□□□□□ -0.21
SMARCD1-201ENST00000381513 DEFB123Q8N688 67 aa13.76□□□□□ -0.21
SMARCD1-201ENST00000381513 CHCHD7Q9BUK0 85 aa13.76□□□□□ -0.21
SMARCD1-201ENST00000381513 RPL28P46779 137 aaKnown RBP13.76□□□□□ -0.21
SMARCD1-201ENST00000381513 PRORYQ9H606 182 aa13.76□□□□□ -0.21
SMARCD1-201ENST00000381513 TRAV13-2A0A0B4J235 113 aa13.75□□□□□ -0.21
SMARCD1-201ENST00000381513 NOTCH3Q9UM47 2321 aa13.75□□□□□ -0.21
SMARCD1-201ENST00000381513 ZNF415Q09FC8 603 aa13.75□□□□□ -0.21
SMARCD1-201ENST00000381513 FAM19A1Q7Z5A9 133 aa13.74□□□□□ -0.21
SMARCD1-201ENST00000381513 ENHOQ6UWT2 76 aa13.73□□□□□ -0.21
SMARCD1-201ENST00000381513 C5orf56Q8N8D9 126 aa13.73□□□□□ -0.21
SMARCD1-201ENST00000381513 PRM2P04554 102 aa13.73□□□□□ -0.21
SMARCD1-201ENST00000381513 PRO3102Q9H379 93 aa13.73□□□□□ -0.21
SMARCD1-201ENST00000381513 OVOL2Q9BRP0 275 aa13.72□□□□□ -0.21
SMARCD1-201ENST00000381513 LINC00337Q8N6G1 96 aa13.72□□□□□ -0.21
SMARCD1-201ENST00000381513 K7ENP7 123 aa13.71□□□□□ -0.21
SMARCD1-201ENST00000381513 XCL1P47992 114 aa13.71□□□□□ -0.21
SMARCD1-201ENST00000381513 XCL2Q9UBD3 114 aa13.71□□□□□ -0.21
SMARCD1-201ENST00000381513 RPL36AP83881 106 aaKnown RBP13.71□□□□□ -0.21
SMARCD1-201ENST00000381513 SMIM11BQ8TCY0 68 aa13.71□□□□□ -0.21
SMARCD1-201ENST00000381513 RPL36ALQ969Q0 106 aaKnown RBP13.71□□□□□ -0.21
SMARCD1-201ENST00000381513 SND1-IT1Q9HBX3 110 aa13.71□□□□□ -0.21
SMARCD1-201ENST00000381513 TOMM7Q9P0U1 55 aa13.71□□□□□ -0.22
SMARCD1-201ENST00000381513 A0A0U1RQV1 116 aa13.7□□□□□ -0.22
SMARCD1-201ENST00000381513 NDUFC2-KCTD14E9PQ53 114 aa13.7□□□□□ -0.22
SMARCD1-201ENST00000381513 KLK9Q2XQG4 91 aa13.7□□□□□ -0.22
SMARCD1-201ENST00000381513 LINC00242Q5T6M2 205 aa13.7□□□□□ -0.22
SMARCD1-201ENST00000381513 IGHV3OR16-12A0A075B7B8 117 aa13.69□□□□□ -0.22
SMARCD1-201ENST00000381513 Q6ZSN1 163 aa13.69□□□□□ -0.22
SMARCD1-201ENST00000381513 SMIM1B2RUZ4 78 aa13.69□□□□□ -0.22
SMARCD1-201ENST00000381513 MIR7-3HGQ8N6C7 128 aa13.69□□□□□ -0.22
SMARCD1-201ENST00000381513 RNASE1P07998 156 aaKnown RBP13.69□□□□□ -0.22
SMARCD1-201ENST00000381513 SNRPD3P62318 126 aaKnown RBP13.69□□□□□ -0.22
SMARCD1-201ENST00000381513 LY6EQ16553 131 aa13.68□□□□□ -0.22
SMARCD1-201ENST00000381513 IGFL3Q6UXB1 125 aa13.68□□□□□ -0.22
SMARCD1-201ENST00000381513 SERP1Q9Y6X1 66 aa13.68□□□□□ -0.22
SMARCD1-201ENST00000381513 IGLV5-39A0A0G2JS06 123 aa13.68□□□□□ -0.22
SMARCD1-201ENST00000381513 LINC00158P58513 81 aa13.67□□□□□ -0.22
SMARCD1-201ENST00000381513 C19orf54Q5BKX5 351 aa13.67□□□□□ -0.22
SMARCD1-201ENST00000381513 DEFB124Q8NES8 71 aa13.67□□□□□ -0.22
SMARCD1-201ENST00000381513 GRNP28799 593 aaKnown RBP13.67□□□□□ -0.22
SMARCD1-201ENST00000381513 SIRPDQ9H106 197 aa13.67□□□□□ -0.22
SMARCD1-201ENST00000381513 PF4P02776 101 aa13.66□□□□□ -0.22
SMARCD1-201ENST00000381513 S100A7L2Q5SY68 101 aa13.66□□□□□ -0.22
SMARCD1-201ENST00000381513 BRK1Q8WUW1 75 aa13.66□□□□□ -0.22
SMARCD1-201ENST00000381513 MOB4Q9Y3A3 225 aa13.66□□□□□ -0.22
SMARCD1-201ENST00000381513 IGLV5-45A0A087WSX0 123 aa13.66□□□□□ -0.22
SMARCD1-201ENST00000381513 SNURFQ9Y675 71 aa13.66□□□□□ -0.22
SMARCD1-201ENST00000381513 ANKRD11Q6UB99 2663 aaPredicted RBP13.65□□□□□ -0.22
SMARCD1-201ENST00000381513 H0YGX0 51 aa13.65□□□□□ -0.22
SMARCD1-201ENST00000381513 PSMB8P28062 276 aa13.64□□□□□ -0.23
SMARCD1-201ENST00000381513 PAX4O43316 350 aa13.63□□□□□ -0.23
SMARCD1-201ENST00000381513 IGKV3OR2-268A0A0C4DH90 116 aa13.63□□□□□ -0.23
SMARCD1-201ENST00000381513 ORMDL1Q9P0S3 153 aa13.63□□□□□ -0.23
SMARCD1-201ENST00000381513 IGKV2-28A0A075B6P5 120 aa13.62□□□□□ -0.23
SMARCD1-201ENST00000381513 IGKV2D-28P01615 120 aa13.62□□□□□ -0.23
SMARCD1-201ENST00000381513 RBM3P98179 157 aaKnown RBP13.62□□□□□ -0.23
SMARCD1-201ENST00000381513 USMG5Q96IX5 58 aa13.62□□□□□ -0.23
SMARCD1-201ENST00000381513 F8WDY8 70 aa13.62□□□□□ -0.23
SMARCD1-201ENST00000381513 CCKP06307 115 aa13.62□□□□□ -0.23
SMARCD1-201ENST00000381513 AKAP13Q12802 2813 aa13.61□□□□□ -0.23
SMARCD1-201ENST00000381513 H7BZZ5 65 aa13.6□□□□□ -0.23
SMARCD1-201ENST00000381513 BRD3OSQ6XYD6 125 aa13.6□□□□□ -0.23
SMARCD1-201ENST00000381513 TMEM86BQ8N661 226 aa13.6□□□□□ -0.23
SMARCD1-201ENST00000381513 UBL5Q9BZL1 73 aa13.6□□□□□ -0.23
SMARCD1-201ENST00000381513 OBSCN-AS1Q96MR7 158 aa13.59□□□□□ -0.23
SMARCD1-201ENST00000381513 SMIM26A0A096LP01 95 aa13.59□□□□□ -0.23
SMARCD1-201ENST00000381513 TLN1Q9Y490 2541 aaKnown RBP13.58□□□□□ -0.23
SMARCD1-201ENST00000381513 PLA2G2CQ5R387 149 aa13.58□□□□□ -0.23
SMARCD1-201ENST00000381513 RMI2Q96E14 147 aa13.58□□□□□ -0.24
SMARCD1-201ENST00000381513 LINC00474Q9P2X8 69 aa13.57□□□□□ -0.24
SMARCD1-201ENST00000381513 V9GYY9 64 aa13.57□□□□□ -0.24
SMARCD1-201ENST00000381513 F8WEM9 126 aa13.56□□□□□ -0.24
SMARCD1-201ENST00000381513 ATP5EP2Q5VTU8 51 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms