RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 GCSHP23434 173 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 CKS2P33552 79 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 ATP5L2Q7Z4Y8 100 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 BAALCQ8WXS3 180 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 TMEM70Q9BUB7 260 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 SEC11CQ9BY50 192 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 TMEM242Q9NWH2 141 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 IGLV4-60A0A075B6I1 120 aa6.12□□□□□ -1.43
HMGN1-202ENST00000380747 TSHBP01222 138 aa6.12□□□□□ -1.43
HMGN1-202ENST00000380747 WFDC2Q14508 124 aa6.12□□□□□ -1.43
HMGN1-202ENST00000380747 MIAQ16674 131 aa6.12□□□□□ -1.43
HMGN1-202ENST00000380747 AMMECR1LQ6DCA0 310 aa6.12□□□□□ -1.43
HMGN1-202ENST00000380747 RNASEKQ6P5S7 137 aaKnown RBP6.12□□□□□ -1.43
HMGN1-202ENST00000380747 Q8N814 137 aa6.12□□□□□ -1.43
HMGN1-202ENST00000380747 NRACQ8N912 160 aa6.12□□□□□ -1.43
HMGN1-202ENST00000380747 IGLV5-52A0A0A0MRZ9 124 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 TRBV27A0A0K0K1C4 114 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 A0A1B0GUV1 79 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 D6R8Y8 96 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 VCYO14598 125 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 FCER1GP30273 86 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 POLR2KP53803 58 aaKnown RBP6.11□□□□□ -1.43
HMGN1-202ENST00000380747 SUMO2P61956 95 aaKnown RBP6.11□□□□□ -1.43
HMGN1-202ENST00000380747 REG3AQ06141 175 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 C20orf203Q8NBC4 194 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 BTF3L4Q96K17 158 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 PRR34Q9NV39 138 aa6.11□□□□□ -1.43
HMGN1-202ENST00000380747 IGLV10-54A0A075B6I4 117 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 IGKV3OR2-268A0A0C4DH90 116 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 H7C423 109 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 TNFRSF6BO95407 300 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 HLA-DQA1P01909 254 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 FGF6P10767 208 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 TMEM101Q96IK0 257 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 C20orf78Q9BR46 151 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 CTDSP1Q9GZU7 261 aa6.1□□□□□ -1.43
HMGN1-202ENST00000380747 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.43
HMGN1-202ENST00000380747 C7orf77A4D0Y5 90 aa6.09□□□□□ -1.43
HMGN1-202ENST00000380747 NPYP01303 97 aa6.09□□□□□ -1.43
HMGN1-202ENST00000380747 PPBPP02775 128 aa6.09□□□□□ -1.43
HMGN1-202ENST00000380747 ESDP10768 282 aa6.09□□□□□ -1.43
HMGN1-202ENST00000380747 TMEM136Q6ZRR5 245 aa6.09□□□□□ -1.43
HMGN1-202ENST00000380747 ORMDL3Q8N138 153 aa6.09□□□□□ -1.43
HMGN1-202ENST00000380747 NTN5Q8WTR8 489 aaPredicted RBP6.09□□□□□ -1.43
HMGN1-202ENST00000380747 IMMP2LQ96T52 175 aa6.09□□□□□ -1.43
HMGN1-202ENST00000380747 KIR2DL4Q99706 377 aa6.09□□□□□ -1.43
HMGN1-202ENST00000380747 TRBV24-1A0A075B6N3 115 aa6.08□□□□□ -1.44
HMGN1-202ENST00000380747 S100PP25815 95 aa6.08□□□□□ -1.44
HMGN1-202ENST00000380747 C10orf91Q5T1B1 145 aa6.08□□□□□ -1.44
HMGN1-202ENST00000380747 OR5A1Q8NGJ0 315 aa6.08□□□□□ -1.44
HMGN1-202ENST00000380747 PRELID3AQ96N28 172 aa6.08□□□□□ -1.44
HMGN1-202ENST00000380747 SMIM2Q9BVW6 85 aa6.08□□□□□ -1.44
HMGN1-202ENST00000380747 CARHSP1Q9Y2V2 147 aaKnown RBP6.08□□□□□ -1.44
HMGN1-202ENST00000380747 TRAV8-4A0A0B4J246 113 aa6.07□□□□□ -1.44
HMGN1-202ENST00000380747 USP17L23D6RBM5 183 aa6.07□□□□□ -1.44
HMGN1-202ENST00000380747 PHOX2AO14813 284 aa6.07□□□□□ -1.44
HMGN1-202ENST00000380747 ZNF25P17030 456 aaPredicted RBP6.07□□□□□ -1.44
HMGN1-202ENST00000380747 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
HMGN1-202ENST00000380747 RHEBQ15382 184 aa6.07□□□□□ -1.44
HMGN1-202ENST00000380747 DGAT2L7PQ6IED9 249 aa6.07□□□□□ -1.44
HMGN1-202ENST00000380747 RPS10P5Q9NQ39 176 aa6.07□□□□□ -1.44
HMGN1-202ENST00000380747 TRAV9-1A0A075B6T8 112 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 LOC389332A0A1B0GUA5 103 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 GAGE12HA6NDE8 117 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 EPM2AB3EWF7 344 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 TCAPO15273 167 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 APOC3P02656 99 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 RPL32P62910 135 aaKnown RBP6.06□□□□□ -1.44
HMGN1-202ENST00000380747 NDUFA5Q16718 116 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 C14orf177Q52M58 125 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 KRTAP26-1Q6PEX3 210 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 TMEM18Q96B42 140 aa6.06□□□□□ -1.44
HMGN1-202ENST00000380747 HMCN2Q8NDA2 5059 aa6.05□□□□□ -1.44
HMGN1-202ENST00000380747 UBR4Q5T4S7 5183 aa6.05□□□□□ -1.44
HMGN1-202ENST00000380747 RAB5AP20339 215 aa6.05□□□□□ -1.44
HMGN1-202ENST00000380747 SMAGPQ0VAQ4 97 aa6.05□□□□□ -1.44
HMGN1-202ENST00000380747 MRPL52Q86TS9 123 aaKnown RBP6.05□□□□□ -1.44
HMGN1-202ENST00000380747 CHCHD10Q8WYQ3 142 aaPredicted RBP6.05□□□□□ -1.44
HMGN1-202ENST00000380747 MAP1LC3AQ9H492 121 aa6.05□□□□□ -1.44
HMGN1-202ENST00000380747 LAMTOR2Q9Y2Q5 125 aa6.05□□□□□ -1.44
HMGN1-202ENST00000380747 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
HMGN1-202ENST00000380747 KIAA1644Q3SXP7 199 aa6.04□□□□□ -1.44
HMGN1-202ENST00000380747 LINC01620Q4KN68 170 aa6.04□□□□□ -1.44
HMGN1-202ENST00000380747 ZNF664Q8N3J9 261 aa6.04□□□□□ -1.44
HMGN1-202ENST00000380747 CDC42SE2Q9NRR3 84 aa6.04□□□□□ -1.44
HMGN1-202ENST00000380747 UBE2D4Q9Y2X8 147 aa6.04□□□□□ -1.44
HMGN1-202ENST00000380747 LINC00959A0A1B0GUT2 108 aa6.03□□□□□ -1.44
HMGN1-202ENST00000380747 SNAPINO95295 136 aa6.03□□□□□ -1.44
HMGN1-202ENST00000380747 PRSS1P07477 247 aa6.03□□□□□ -1.44
HMGN1-202ENST00000380747 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
HMGN1-202ENST00000380747 RPL39P62891 51 aaKnown RBP6.03□□□□□ -1.44
HMGN1-202ENST00000380747 SS18Q15532 418 aa6.03□□□□□ -1.44
HMGN1-202ENST00000380747 RNASE13Q5GAN3 156 aaKnown RBP6.03□□□□□ -1.44
HMGN1-202ENST00000380747 SVBPQ8N300 66 aa6.03□□□□□ -1.44
HMGN1-202ENST00000380747 hDV102S1A0JD36 115 aa6.02□□□□□ -1.45
HMGN1-202ENST00000380747 PRSS47A8MTI9 375 aa6.02□□□□□ -1.45
HMGN1-202ENST00000380747 CCL25O15444 150 aa6.02□□□□□ -1.45
HMGN1-202ENST00000380747 XCL1P47992 114 aa6.02□□□□□ -1.45
HMGN1-202ENST00000380747 HAMPP81172 84 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms