RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 MRAPQ8TCY5 172 aa13.08□□□□□ -0.32
UBL3-201ENST00000380680 COL6A3P12111 3177 aa13.08□□□□□ -0.32
UBL3-201ENST00000380680 TSHBP01222 138 aa13.08□□□□□ -0.32
UBL3-201ENST00000380680 A0A0J9YXY3 114 aa13.07□□□□□ -0.32
UBL3-201ENST00000380680 RPL32P62910 135 aaKnown RBP13.07□□□□□ -0.32
UBL3-201ENST00000380680 TINCRA0A1B0GVN0 87 aa13.06□□□□□ -0.32
UBL3-201ENST00000380680 ICOSQ9Y6W8 199 aa13.06□□□□□ -0.32
UBL3-201ENST00000380680 EYSQ5T1H1 3165 aa13.06□□□□□ -0.32
UBL3-201ENST00000380680 LINC00482Q8N8I6 264 aa13.06□□□□□ -0.32
UBL3-201ENST00000380680 SPEGQ15772 3267 aa13.06□□□□□ -0.32
UBL3-201ENST00000380680 COX7A2LO14548 114 aa13.06□□□□□ -0.32
UBL3-201ENST00000380680 INAFM2P0DMQ5 153 aa13.06□□□□□ -0.32
UBL3-201ENST00000380680 PSCAO43653 123 aa13.05□□□□□ -0.32
UBL3-201ENST00000380680 ODF3L2Q3SX64 289 aa13.05□□□□□ -0.32
UBL3-201ENST00000380680 FAM222AQ5U5X8 452 aa13.05□□□□□ -0.32
UBL3-201ENST00000380680 ANKRD29Q8N6D5 301 aa13.05□□□□□ -0.32
UBL3-201ENST00000380680 ZMAT4Q9H898 229 aa13.05□□□□□ -0.32
UBL3-201ENST00000380680 COL27A1Q8IZC6 1860 aaPredicted RBP13.05□□□□□ -0.32
UBL3-201ENST00000380680 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
UBL3-201ENST00000380680 LY6G6DO95868 133 aa13.04□□□□□ -0.32
UBL3-201ENST00000380680 LINC01620Q4KN68 170 aa13.04□□□□□ -0.32
UBL3-201ENST00000380680 SMR3AQ99954 134 aa13.04□□□□□ -0.32
UBL3-201ENST00000380680 TMEM223A0PJW6 202 aa13.04□□□□□ -0.32
UBL3-201ENST00000380680 IGHV3-30P01768 117 aa13.04□□□□□ -0.32
UBL3-201ENST00000380680 IGHV3-33P01772 117 aa13.04□□□□□ -0.32
UBL3-201ENST00000380680 IGHV3-30-5P0DP03 117 aa13.04□□□□□ -0.32
UBL3-201ENST00000380680 RS1O15537 224 aa13.04□□□□□ -0.32
UBL3-201ENST00000380680 PTH2Q96A98 100 aa13.04□□□□□ -0.32
UBL3-201ENST00000380680 HILS1P60008 231 aa13.03□□□□□ -0.32
UBL3-201ENST00000380680 EDA2RQ9HAV5 297 aa13.03□□□□□ -0.32
UBL3-201ENST00000380680 Q9HAA7 133 aa13.03□□□□□ -0.32
UBL3-201ENST00000380680 MIR7-3HGQ8N6C7 128 aa13.03□□□□□ -0.32
UBL3-201ENST00000380680 ZNF580Q9UK33 172 aa13.03□□□□□ -0.32
UBL3-201ENST00000380680 IGKV2D-24A0A075B6R9 120 aa13.02□□□□□ -0.32
UBL3-201ENST00000380680 TEN1Q86WV5 123 aa13.02□□□□□ -0.32
UBL3-201ENST00000380680 HIST1H4AP62805 103 aaKnown RBP13.02□□□□□ -0.32
UBL3-201ENST00000380680 KLK12Q9UKR0 248 aa13.02□□□□□ -0.33
UBL3-201ENST00000380680 A8MZ25 164 aa13.01□□□□□ -0.33
UBL3-201ENST00000380680 BAALC-AS2P0C853 105 aa13.01□□□□□ -0.33
UBL3-201ENST00000380680 PLA2G2AP14555 144 aa13.01□□□□□ -0.33
UBL3-201ENST00000380680 FRYLO94915 3013 aa13.01□□□□□ -0.33
UBL3-201ENST00000380680 CRYBA4P53673 196 aa13.01□□□□□ -0.33
UBL3-201ENST00000380680 PYGO1Q9Y3Y4 419 aa13.01□□□□□ -0.33
UBL3-201ENST00000380680 FRYQ5TBA9 3013 aa13.01□□□□□ -0.33
UBL3-201ENST00000380680 IGIPA6NJ69 53 aa13□□□□□ -0.33
UBL3-201ENST00000380680 REV3LO60673 3130 aa13□□□□□ -0.33
UBL3-201ENST00000380680 MIAQ16674 131 aa13□□□□□ -0.33
UBL3-201ENST00000380680 TRAV26-1A0A087WT03 109 aa12.99□□□□□ -0.33
UBL3-201ENST00000380680 CLEC2BQ92478 149 aa12.99□□□□□ -0.33
UBL3-201ENST00000380680 NBEAQ8NFP9 2946 aa12.99□□□□□ -0.33
UBL3-201ENST00000380680 C1orf43Q9BWL3 253 aa12.99□□□□□ -0.33
UBL3-201ENST00000380680 IGLV2-18A0A075B6J9 118 aa12.98□□□□□ -0.33
UBL3-201ENST00000380680 TCL1BO95988 128 aa12.97□□□□□ -0.33
UBL3-201ENST00000380680 CFAP46Q8IYW2 2715 aa12.97□□□□□ -0.33
UBL3-201ENST00000380680 TRBV6-4A0A1B0GX49 114 aa12.97□□□□□ -0.33
UBL3-201ENST00000380680 NKAPP1Q8N9T2 125 aa12.97□□□□□ -0.33
UBL3-201ENST00000380680 LOC100131303A0A0U1RQF7 123 aa12.96□□□□□ -0.33
UBL3-201ENST00000380680 F8P00451 2351 aa12.96□□□□□ -0.33
UBL3-201ENST00000380680 SMIM9A6NGZ8 99 aa12.95□□□□□ -0.34
UBL3-201ENST00000380680 FOXI1Q12951 378 aa12.95□□□□□ -0.34
UBL3-201ENST00000380680 TRBV6-8A0A0A6YYG3 113 aa12.95□□□□□ -0.34
UBL3-201ENST00000380680 FLNAP21333 2647 aaKnown RBP12.95□□□□□ -0.34
UBL3-201ENST00000380680 LINC00269Q8N2A0 174 aa12.95□□□□□ -0.34
UBL3-201ENST00000380680 CAMK2N2Q96S95 79 aa12.95□□□□□ -0.34
UBL3-201ENST00000380680 SPANXB1Q9NS25 103 aaPredicted RBP12.95□□□□□ -0.34
UBL3-201ENST00000380680 UBE2D4Q9Y2X8 147 aa12.94□□□□□ -0.34
UBL3-201ENST00000380680 C15orf53Q8NAA6 179 aa12.94□□□□□ -0.34
UBL3-201ENST00000380680 TIRAPP58753 221 aa12.93□□□□□ -0.34
UBL3-201ENST00000380680 A0A0B4J2C4 111 aa12.93□□□□□ -0.34
UBL3-201ENST00000380680 G3V4G9 280 aa12.93□□□□□ -0.34
UBL3-201ENST00000380680 SPAG11BQ08648 103 aa12.93□□□□□ -0.34
UBL3-201ENST00000380680 BOD1L1Q8NFC6 3051 aa12.93□□□□□ -0.34
UBL3-201ENST00000380680 LYRM9A8MSI8 78 aa12.92□□□□□ -0.34
UBL3-201ENST00000380680 H0YGX0 51 aa12.92□□□□□ -0.34
UBL3-201ENST00000380680 PIK3CD-AS1Q5SR53 167 aa12.92□□□□□ -0.34
UBL3-201ENST00000380680 C1orf158Q8N1D5 194 aa12.91□□□□□ -0.34
UBL3-201ENST00000380680 TRBV10-2A0A0K0K1G8 114 aa12.91□□□□□ -0.34
UBL3-201ENST00000380680 FREM2Q5SZK8 3169 aa12.91□□□□□ -0.34
UBL3-201ENST00000380680 ITPR3Q14573 2671 aa12.9□□□□□ -0.34
UBL3-201ENST00000380680 MUC4Q99102 2169 aa12.9□□□□□ -0.34
UBL3-201ENST00000380680 IGLV1-51P01701 117 aa12.89□□□□□ -0.35
UBL3-201ENST00000380680 LINC00308Q8TCZ7 52 aa12.89□□□□□ -0.35
UBL3-201ENST00000380680 ORMDL1Q9P0S3 153 aa12.89□□□□□ -0.35
UBL3-201ENST00000380680 LECT2O14960 151 aa12.88□□□□□ -0.35
UBL3-201ENST00000380680 REG3AQ06141 175 aa12.88□□□□□ -0.35
UBL3-201ENST00000380680 KIF25-AS1Q9Y6Z4 181 aa12.88□□□□□ -0.35
UBL3-201ENST00000380680 RMI2Q96E14 147 aa12.88□□□□□ -0.35
UBL3-201ENST00000380680 USP24Q9UPU5 2620 aa12.88□□□□□ -0.35
UBL3-201ENST00000380680 IGLV4-69A0A075B6H9 119 aa12.88□□□□□ -0.35
UBL3-201ENST00000380680 NDUFA1O15239 70 aa12.88□□□□□ -0.35
UBL3-201ENST00000380680 RBX1P62877 108 aa12.88□□□□□ -0.35
UBL3-201ENST00000380680 MRPS36P82909 103 aaKnown RBP12.88□□□□□ -0.35
UBL3-201ENST00000380680 H3BT86 120 aa12.87□□□□□ -0.35
UBL3-201ENST00000380680 NDUFA7O95182 113 aa12.87□□□□□ -0.35
UBL3-201ENST00000380680 H7C423 109 aa12.87□□□□□ -0.35
UBL3-201ENST00000380680 SPANXCQ9NY87 97 aa12.87□□□□□ -0.35
UBL3-201ENST00000380680 CXCL5P42830 114 aa12.86□□□□□ -0.35
UBL3-201ENST00000380680 CCL18P55774 89 aa12.86□□□□□ -0.35
UBL3-201ENST00000380680 UBE2D3P61077 147 aa12.86□□□□□ -0.35
UBL3-201ENST00000380680 UBE2D2P62837 147 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms