RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 NDUFA12Q9UI09 145 aa14.38□□□□□ -0.11
EBF1-202ENST00000380654 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.37□□□□□ -0.11
EBF1-202ENST00000380654 IGHV3-33P01772 117 aa14.37□□□□□ -0.11
EBF1-202ENST00000380654 LINC00694P0DN24 101 aa14.37□□□□□ -0.11
EBF1-202ENST00000380654 CDKN2A-AS1Q9UH64 79 aa14.37□□□□□ -0.11
EBF1-202ENST00000380654 GIG44P09565 113 aaPredicted RBP14.36□□□□□ -0.11
EBF1-202ENST00000380654 SCGB1C2P0DMR2 95 aa14.36□□□□□ -0.11
EBF1-202ENST00000380654 GEMIN7Q9H840 131 aaKnown RBP14.36□□□□□ -0.11
EBF1-202ENST00000380654 NDUFA7O95182 113 aa14.35□□□□□ -0.11
EBF1-202ENST00000380654 PRSS2P07478 247 aa14.35□□□□□ -0.11
EBF1-202ENST00000380654 NOP10Q9NPE3 64 aaKnown RBP14.35□□□□□ -0.11
EBF1-202ENST00000380654 NPC2P61916 151 aa14.35□□□□□ -0.11
EBF1-202ENST00000380654 COX6A2Q02221 97 aa14.35□□□□□ -0.11
EBF1-202ENST00000380654 LYRM7Q5U5X0 104 aa14.35□□□□□ -0.11
EBF1-202ENST00000380654 DGAT2L7PQ6IED9 249 aa14.35□□□□□ -0.11
EBF1-202ENST00000380654 HELZ2Q9BYK8 2649 aaKnown RBP14.34□□□□□ -0.11
EBF1-202ENST00000380654 A0A0B4J2C4 111 aa14.33□□□□□ -0.11
EBF1-202ENST00000380654 J3QR89 54 aa14.33□□□□□ -0.11
EBF1-202ENST00000380654 RPL35AP18077 110 aaKnown RBP14.33□□□□□ -0.11
EBF1-202ENST00000380654 NTM-AS1Q6ZSK4 140 aa14.33□□□□□ -0.11
EBF1-202ENST00000380654 K7EQD1 137 aa14.33□□□□□ -0.12
EBF1-202ENST00000380654 ERG28Q9UKR5 140 aa14.33□□□□□ -0.12
EBF1-202ENST00000380654 RNASE1P07998 156 aaKnown RBP14.32□□□□□ -0.12
EBF1-202ENST00000380654 C1QTNF4Q9BXJ3 329 aa14.32□□□□□ -0.12
EBF1-202ENST00000380654 GTSF1LQ9H1H1 148 aa14.32□□□□□ -0.12
EBF1-202ENST00000380654 GAGE12HA6NDE8 117 aa14.32□□□□□ -0.12
EBF1-202ENST00000380654 TRBV20-1A0A075B6N2 111 aa14.31□□□□□ -0.12
EBF1-202ENST00000380654 GAGE12JA6NER3 117 aa14.31□□□□□ -0.12
EBF1-202ENST00000380654 FOXI1Q12951 378 aa14.31□□□□□ -0.12
EBF1-202ENST00000380654 GAGE4Q13068 117 aa14.31□□□□□ -0.12
EBF1-202ENST00000380654 GAGE5Q13069 117 aa14.31□□□□□ -0.12
EBF1-202ENST00000380654 PLA2G2AP14555 144 aa14.31□□□□□ -0.12
EBF1-202ENST00000380654 RPL36AP83881 106 aaKnown RBP14.31□□□□□ -0.12
EBF1-202ENST00000380654 RPL36ALQ969Q0 106 aaKnown RBP14.31□□□□□ -0.12
EBF1-202ENST00000380654 ZFAND6Q6FIF0 208 aa14.3□□□□□ -0.12
EBF1-202ENST00000380654 TMEM101Q96IK0 257 aa14.3□□□□□ -0.12
EBF1-202ENST00000380654 C16orf95Q9H693 158 aa14.3□□□□□ -0.12
EBF1-202ENST00000380654 UNC79Q9P2D8 2635 aa14.3□□□□□ -0.12
EBF1-202ENST00000380654 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.3□□□□□ -0.12
EBF1-202ENST00000380654 TRAV4A0A0B4J268 109 aa14.3□□□□□ -0.12
EBF1-202ENST00000380654 PLAC8L1A1L4L8 177 aa14.3□□□□□ -0.12
EBF1-202ENST00000380654 Q1RN00 199 aa14.3□□□□□ -0.12
EBF1-202ENST00000380654 DAND5Q8N907 189 aa14.3□□□□□ -0.12
EBF1-202ENST00000380654 C19orf73Q9NVV2 129 aa14.3□□□□□ -0.12
EBF1-202ENST00000380654 IGLV1-51P01701 117 aa14.29□□□□□ -0.12
EBF1-202ENST00000380654 LINC00242Q5T6M2 205 aa14.29□□□□□ -0.12
EBF1-202ENST00000380654 SPANXDQ9BXN6 97 aa14.29□□□□□ -0.12
EBF1-202ENST00000380654 SPANXCQ9NY87 97 aa14.29□□□□□ -0.12
EBF1-202ENST00000380654 IGLV5-45A0A087WSX0 123 aa14.28□□□□□ -0.12
EBF1-202ENST00000380654 GAGE7O76087 117 aa14.28□□□□□ -0.12
EBF1-202ENST00000380654 GAGE12FP0CL80 117 aa14.28□□□□□ -0.12
EBF1-202ENST00000380654 GAGE12GP0CL81 117 aa14.28□□□□□ -0.12
EBF1-202ENST00000380654 GAGE12IP0CL82 117 aa14.28□□□□□ -0.12
EBF1-202ENST00000380654 TIRAPP58753 221 aa14.28□□□□□ -0.12
EBF1-202ENST00000380654 MIAQ16674 131 aa14.28□□□□□ -0.12
EBF1-202ENST00000380654 TRBV10-1A0A0K0K1A3 114 aa14.27□□□□□ -0.12
EBF1-202ENST00000380654 TRAV13-1A0A0B4J241 112 aa14.27□□□□□ -0.13
EBF1-202ENST00000380654 LOC100131303A0A0U1RQF7 123 aa14.27□□□□□ -0.13
EBF1-202ENST00000380654 ATP6V0E2Q8NHE4 81 aa14.27□□□□□ -0.13
EBF1-202ENST00000380654 CARD19Q96LW7 228 aa14.26□□□□□ -0.13
EBF1-202ENST00000380654 SPATA25Q9BR10 227 aa14.26□□□□□ -0.13
EBF1-202ENST00000380654 DAZ2Q13117 558 aaKnown RBP14.26□□□□□ -0.13
EBF1-202ENST00000380654 DAZ4Q86SG3 579 aaKnown RBP14.26□□□□□ -0.13
EBF1-202ENST00000380654 DAZ3Q9NR90 486 aaKnown RBP14.26□□□□□ -0.13
EBF1-202ENST00000380654 SBSPONQ8IVN8 264 aa14.25□□□□□ -0.13
EBF1-202ENST00000380654 SIGMAR1Q99720 223 aa14.25□□□□□ -0.13
EBF1-202ENST00000380654 FASNP49327 2511 aaKnown RBP14.25□□□□□ -0.13
EBF1-202ENST00000380654 TRGV2A0A075B6R0 118 aa14.25□□□□□ -0.13
EBF1-202ENST00000380654 SMAGPQ0VAQ4 97 aa14.25□□□□□ -0.13
EBF1-202ENST00000380654 SMR3AQ99954 134 aa14.25□□□□□ -0.13
EBF1-202ENST00000380654 C9JAW5 83 aa14.24□□□□□ -0.13
EBF1-202ENST00000380654 TRIAP1O43715 76 aa14.24□□□□□ -0.13
EBF1-202ENST00000380654 TEN1Q86WV5 123 aa14.24□□□□□ -0.13
EBF1-202ENST00000380654 CSNK1G2-AS1Q8NCQ2 148 aa14.24□□□□□ -0.13
EBF1-202ENST00000380654 ZNF625Q96I27 306 aaPredicted RBP14.24□□□□□ -0.13
EBF1-202ENST00000380654 HERVK_113P63121 156 aa14.24□□□□□ -0.13
EBF1-202ENST00000380654 C16orf74Q96GX8 76 aa14.24□□□□□ -0.13
EBF1-202ENST00000380654 NDUFA1O15239 70 aa14.23□□□□□ -0.13
EBF1-202ENST00000380654 ANKRD29Q8N6D5 301 aa14.23□□□□□ -0.13
EBF1-202ENST00000380654 Q9H8V8 135 aa14.23□□□□□ -0.13
EBF1-202ENST00000380654 CDC42SE2Q9NRR3 84 aa14.23□□□□□ -0.13
EBF1-202ENST00000380654 IGLV5-39A0A0G2JS06 123 aa14.22□□□□□ -0.13
EBF1-202ENST00000380654 A0A0U1RRA0 63 aa14.21□□□□□ -0.13
EBF1-202ENST00000380654 SLC25A20O43772 301 aa14.21□□□□□ -0.13
EBF1-202ENST00000380654 CSDC2Q9Y534 153 aaKnown RBP14.21□□□□□ -0.13
EBF1-202ENST00000380654 SMIM1B2RUZ4 78 aa14.21□□□□□ -0.13
EBF1-202ENST00000380654 CMC4P56277 68 aaPredicted RBP14.21□□□□□ -0.13
EBF1-202ENST00000380654 HILS1P60008 231 aa14.21□□□□□ -0.13
EBF1-202ENST00000380654 PPDPFLQ8WWR9 84 aa14.2□□□□□ -0.14
EBF1-202ENST00000380654 FN1P02751 2386 aaKnown RBP14.2□□□□□ -0.14
EBF1-202ENST00000380654 VWFP04275 2813 aa14.2□□□□□ -0.14
EBF1-202ENST00000380654 HIVEP2P31629 2446 aa14.19□□□□□ -0.14
EBF1-202ENST00000380654 GCN1Q92616 2671 aaKnown RBP14.19□□□□□ -0.14
EBF1-202ENST00000380654 TRBV30A0A0K0K1B3 111 aa14.19□□□□□ -0.14
EBF1-202ENST00000380654 TIMM17BO60830 172 aa14.19□□□□□ -0.14
EBF1-202ENST00000380654 KRTAP10-3P60369 221 aa14.19□□□□□ -0.14
EBF1-202ENST00000380654 FAM19A3Q7Z5A8 133 aa14.19□□□□□ -0.14
EBF1-202ENST00000380654 FAM110AQ9BQ89 295 aa14.19□□□□□ -0.14
EBF1-202ENST00000380654 ICOSQ9Y6W8 199 aa14.19□□□□□ -0.14
EBF1-202ENST00000380654 TMEM243Q9BU79 118 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms