RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 K7EMT4 169 aa9.31□□□□□ -0.92
CHD3-203ENST00000380358 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
CHD3-203ENST00000380358 C20orf203Q8NBC4 194 aa9.31□□□□□ -0.92
CHD3-203ENST00000380358 NEXN-AS1Q8NBZ9 246 aa9.31□□□□□ -0.92
CHD3-203ENST00000380358 LYRM9A8MSI8 78 aa9.3□□□□□ -0.92
CHD3-203ENST00000380358 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
CHD3-203ENST00000380358 DEFB114Q30KQ6 69 aa9.3□□□□□ -0.92
CHD3-203ENST00000380358 TET2Q6N021 2002 aaPredicted RBP9.3□□□□□ -0.92
CHD3-203ENST00000380358 LINC01545Q5VT33 79 aa9.3□□□□□ -0.92
CHD3-203ENST00000380358 LINC00322Q6ZN03 302 aaPredicted RBP9.3□□□□□ -0.92
CHD3-203ENST00000380358 TMEM131Q92545 1883 aa9.3□□□□□ -0.92
CHD3-203ENST00000380358 GPR179Q6PRD1 2367 aa9.3□□□□□ -0.92
CHD3-203ENST00000380358 ZNF706Q9Y5V0 76 aaPredicted RBP9.3□□□□□ -0.92
CHD3-203ENST00000380358 PTPN13Q12923 2485 aa9.29□□□□□ -0.92
CHD3-203ENST00000380358 ANAPC1Q9H1A4 1944 aa9.29□□□□□ -0.92
CHD3-203ENST00000380358 SPANXCQ9NY87 97 aa9.29□□□□□ -0.92
CHD3-203ENST00000380358 TRBV6-5A0A0K0K1A5 114 aa9.29□□□□□ -0.92
CHD3-203ENST00000380358 FSHBP01225 129 aa9.29□□□□□ -0.92
CHD3-203ENST00000380358 LINC01556Q5JQF7 62 aa9.29□□□□□ -0.92
CHD3-203ENST00000380358 CCDC140Q96MF4 163 aa9.29□□□□□ -0.92
CHD3-203ENST00000380358 TP73-AS1Q9UF72 201 aa9.29□□□□□ -0.92
CHD3-203ENST00000380358 TRBV6-8A0A0A6YYG3 113 aa9.28□□□□□ -0.92
CHD3-203ENST00000380358 MIFP14174 115 aa9.28□□□□□ -0.92
CHD3-203ENST00000380358 ZNF843Q8N446 348 aa9.28□□□□□ -0.92
CHD3-203ENST00000380358 Q6YL49 198 aa9.28□□□□□ -0.92
CHD3-203ENST00000380358 CSPG4Q6UVK1 2322 aa9.27□□□□□ -0.92
CHD3-203ENST00000380358 MT-ATP8P03928 68 aa9.27□□□□□ -0.92
CHD3-203ENST00000380358 C10orf25Q5T742 122 aa9.27□□□□□ -0.92
CHD3-203ENST00000380358 Q6ZQY7 126 aa9.27□□□□□ -0.92
CHD3-203ENST00000380358 TIMM17BO60830 172 aa9.27□□□□□ -0.93
CHD3-203ENST00000380358 Q6ZSV7 163 aa9.27□□□□□ -0.93
CHD3-203ENST00000380358 PDE6GP18545 87 aa9.26□□□□□ -0.93
CHD3-203ENST00000380358 C1orf137Q5JT78 98 aa9.26□□□□□ -0.93
CHD3-203ENST00000380358 CFAP126Q5VTH2 177 aa9.26□□□□□ -0.93
CHD3-203ENST00000380358 DOPEY1Q5JWR5 2465 aa9.26□□□□□ -0.93
CHD3-203ENST00000380358 TRBV7-6A0A0J9YX20 115 aa9.25□□□□□ -0.93
CHD3-203ENST00000380358 FAM167A-AS1Q96KT0 104 aa9.25□□□□□ -0.93
CHD3-203ENST00000380358 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
CHD3-203ENST00000380358 SBSPONQ8IVN8 264 aa9.25□□□□□ -0.93
CHD3-203ENST00000380358 M0QXV9 152 aa9.25□□□□□ -0.93
CHD3-203ENST00000380358 SOSTDC1Q6X4U4 206 aa9.25□□□□□ -0.93
CHD3-203ENST00000380358 BEAN1Q3B7T3 259 aa9.25□□□□□ -0.93
CHD3-203ENST00000380358 RNASE8Q8TDE3 154 aaKnown RBP9.25□□□□□ -0.93
CHD3-203ENST00000380358 LTBP1Q14766 1721 aa9.25□□□□□ -0.93
CHD3-203ENST00000380358 LINC00643Q86TS7 51 aa9.24□□□□□ -0.93
CHD3-203ENST00000380358 CRIP2P52943 208 aaPredicted RBP9.24□□□□□ -0.93
CHD3-203ENST00000380358 SIPA1L1O43166 1804 aa9.24□□□□□ -0.93
CHD3-203ENST00000380358 ZFHX2Q9C0A1 2572 aaPredicted RBP9.24□□□□□ -0.93
CHD3-203ENST00000380358 PCDH15Q96QU1 1955 aa9.24□□□□□ -0.93
CHD3-203ENST00000380358 H3BT86 120 aa9.24□□□□□ -0.93
CHD3-203ENST00000380358 PRLHP81277 87 aa9.24□□□□□ -0.93
CHD3-203ENST00000380358 C9orf116Q5BN46 136 aaPredicted RBP9.24□□□□□ -0.93
CHD3-203ENST00000380358 NOTCH4Q99466 2003 aa9.23□□□□□ -0.93
CHD3-203ENST00000380358 SPANXB1Q9NS25 103 aaPredicted RBP9.23□□□□□ -0.93
CHD3-203ENST00000380358 DENND4CQ5VZ89 1909 aa9.23□□□□□ -0.93
CHD3-203ENST00000380358 TECTAO75443 2155 aa9.23□□□□□ -0.93
CHD3-203ENST00000380358 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
CHD3-203ENST00000380358 V9GYY9 64 aa9.22□□□□□ -0.93
CHD3-203ENST00000380358 IGLV4-69A0A075B6H9 119 aa9.22□□□□□ -0.93
CHD3-203ENST00000380358 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
CHD3-203ENST00000380358 HCFC1P51610 2035 aa9.22□□□□□ -0.93
CHD3-203ENST00000380358 TRIAP1O43715 76 aa9.22□□□□□ -0.93
CHD3-203ENST00000380358 XGP55808 180 aa9.22□□□□□ -0.93
CHD3-203ENST00000380358 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
CHD3-203ENST00000380358 RBX1P62877 108 aa9.21□□□□□ -0.93
CHD3-203ENST00000380358 CTRLP40313 264 aa9.21□□□□□ -0.93
CHD3-203ENST00000380358 COA6Q5JTJ3 125 aaKnown RBP9.21□□□□□ -0.93
CHD3-203ENST00000380358 SMIM9A6NGZ8 99 aa9.21□□□□□ -0.93
CHD3-203ENST00000380358 IGLV4-3A0A075B6K6 122 aa9.21□□□□□ -0.94
CHD3-203ENST00000380358 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.94
CHD3-203ENST00000380358 Q8NA96 180 aa9.21□□□□□ -0.94
CHD3-203ENST00000380358 LINC00208Q96KT6 92 aa9.21□□□□□ -0.94
CHD3-203ENST00000380358 PRORYQ9H606 182 aa9.2□□□□□ -0.94
CHD3-203ENST00000380358 TNFRSF13BO14836 293 aaPredicted RBP9.2□□□□□ -0.94
CHD3-203ENST00000380358 PRR3P79522 188 aaKnown RBP9.2□□□□□ -0.94
CHD3-203ENST00000380358 MSMPQ1L6U9 139 aa9.2□□□□□ -0.94
CHD3-203ENST00000380358 Q6ZSR3 168 aa9.2□□□□□ -0.94
CHD3-203ENST00000380358 PLXNB3Q9ULL4 1909 aa9.19□□□□□ -0.94
CHD3-203ENST00000380358 M0R378 163 aa9.19□□□□□ -0.94
CHD3-203ENST00000380358 Q6ZS46 218 aa9.19□□□□□ -0.94
CHD3-203ENST00000380358 ATG2AQ2TAZ0 1938 aa9.19□□□□□ -0.94
CHD3-203ENST00000380358 A0A1W2PNU3 283 aaPredicted RBP9.19□□□□□ -0.94
CHD3-203ENST00000380358 SMIM11BQ8TCY0 68 aa9.19□□□□□ -0.94
CHD3-203ENST00000380358 NDUFA7O95182 113 aa9.18□□□□□ -0.94
CHD3-203ENST00000380358 MUC6Q6W4X9 2439 aa9.18□□□□□ -0.94
CHD3-203ENST00000380358 LMO4P61968 165 aa9.18□□□□□ -0.94
CHD3-203ENST00000380358 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
CHD3-203ENST00000380358 PSPHP1O15172 72 aa9.18□□□□□ -0.94
CHD3-203ENST00000380358 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
CHD3-203ENST00000380358 IGLV1-47P01700 117 aa9.18□□□□□ -0.94
CHD3-203ENST00000380358 Q9UF83 564 aa9.17□□□□□ -0.94
CHD3-203ENST00000380358 HIVEP3Q5T1R4 2406 aa9.17□□□□□ -0.94
CHD3-203ENST00000380358 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
CHD3-203ENST00000380358 LINC01547P58512 204 aaPredicted RBP9.17□□□□□ -0.94
CHD3-203ENST00000380358 THSD7BQ9C0I4 1608 aa9.17□□□□□ -0.94
CHD3-203ENST00000380358 ZNF22P17026 224 aaPredicted RBP9.17□□□□□ -0.94
CHD3-203ENST00000380358 RPL28P46779 137 aaKnown RBP9.16□□□□□ -0.94
CHD3-203ENST00000380358 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
CHD3-203ENST00000380358 K7EQG2 157 aa9.16□□□□□ -0.94
CHD3-203ENST00000380358 LST1O00453 97 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms