RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 RPL36AP83881 106 aaKnown RBP15.44■□□□□ 0.06
TRIM54-202ENST00000380075 RPL36ALQ969Q0 106 aaKnown RBP15.44■□□□□ 0.06
TRIM54-202ENST00000380075 UBE2D1P51668 147 aa15.43■□□□□ 0.06
TRIM54-202ENST00000380075 Q6ZTI0 123 aa15.42■□□□□ 0.06
TRIM54-202ENST00000380075 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.42■□□□□ 0.06
TRIM54-202ENST00000380075 IGKV2-29A2NJV5 120 aaPredicted RBP15.42■□□□□ 0.06
TRIM54-202ENST00000380075 OCIAD2Q56VL3 154 aa15.42■□□□□ 0.06
TRIM54-202ENST00000380075 DAZ4Q86SG3 579 aaKnown RBP15.42■□□□□ 0.06
TRIM54-202ENST00000380075 LINC00482Q8N8I6 264 aa15.42■□□□□ 0.06
TRIM54-202ENST00000380075 DAZ3Q9NR90 486 aaKnown RBP15.42■□□□□ 0.06
TRIM54-202ENST00000380075 IGHV3-38A0A0C4DH36 116 aa15.41■□□□□ 0.06
TRIM54-202ENST00000380075 CEMP1Q6PRD7 247 aaPredicted RBP15.41■□□□□ 0.06
TRIM54-202ENST00000380075 CBY1Q9Y3M2 126 aa15.4■□□□□ 0.06
TRIM54-202ENST00000380075 IGHV3-30P01768 117 aa15.4■□□□□ 0.06
TRIM54-202ENST00000380075 IGHV3-30-5P0DP03 117 aa15.4■□□□□ 0.06
TRIM54-202ENST00000380075 CSNK1G2-AS1Q8NCQ2 148 aa15.4■□□□□ 0.06
TRIM54-202ENST00000380075 OVOL2Q9BRP0 275 aa15.4■□□□□ 0.06
TRIM54-202ENST00000380075 NOP10Q9NPE3 64 aaKnown RBP15.4■□□□□ 0.06
TRIM54-202ENST00000380075 RPL35AP18077 110 aaKnown RBP15.39■□□□□ 0.05
TRIM54-202ENST00000380075 SMAGPQ0VAQ4 97 aa15.39■□□□□ 0.05
TRIM54-202ENST00000380075 WFDC10AQ9H1F0 79 aa15.39■□□□□ 0.05
TRIM54-202ENST00000380075 Q6ZUT4 128 aa15.38■□□□□ 0.05
TRIM54-202ENST00000380075 PLAC8L1A1L4L8 177 aa15.38■□□□□ 0.05
TRIM54-202ENST00000380075 K7ERU9 68 aa15.38■□□□□ 0.05
TRIM54-202ENST00000380075 IGHV1-58A0A0C4DH39 117 aa15.37■□□□□ 0.05
TRIM54-202ENST00000380075 IGHV3-30-3P0DP02 117 aa15.37■□□□□ 0.05
TRIM54-202ENST00000380075 WFDC9Q8NEX5 89 aa15.37■□□□□ 0.05
TRIM54-202ENST00000380075 CSDC2Q9Y534 153 aaKnown RBP15.37■□□□□ 0.05
TRIM54-202ENST00000380075 TMEM238C9JI98 176 aa15.36■□□□□ 0.05
TRIM54-202ENST00000380075 UBE2D3P61077 147 aa15.36■□□□□ 0.05
TRIM54-202ENST00000380075 UBE2D2P62837 147 aa15.36■□□□□ 0.05
TRIM54-202ENST00000380075 RBX1P62877 108 aa15.36■□□□□ 0.05
TRIM54-202ENST00000380075 DGAT2L7PQ6IED9 249 aa15.36■□□□□ 0.05
TRIM54-202ENST00000380075 TIRAPP58753 221 aa15.36■□□□□ 0.05
TRIM54-202ENST00000380075 PGPEP1Q9NXJ5 209 aa15.36■□□□□ 0.05
TRIM54-202ENST00000380075 GEMIN7Q9H840 131 aaKnown RBP15.35■□□□□ 0.05
TRIM54-202ENST00000380075 RNASE13Q5GAN3 156 aaKnown RBP15.35■□□□□ 0.05
TRIM54-202ENST00000380075 IGHV3-64A0A075B6Q5 118 aa15.34■□□□□ 0.05
TRIM54-202ENST00000380075 TRGV2A0A075B6R0 118 aa15.33■□□□□ 0.05
TRIM54-202ENST00000380075 IGLV5-45A0A087WSX0 123 aa15.33■□□□□ 0.05
TRIM54-202ENST00000380075 TRBV6-4A0A1B0GX49 114 aa15.33■□□□□ 0.05
TRIM54-202ENST00000380075 VSIG2Q96IQ7 327 aa15.33■□□□□ 0.05
TRIM54-202ENST00000380075 GTSF1LQ9H1H1 148 aa15.33■□□□□ 0.05
TRIM54-202ENST00000380075 INSL3P51460 131 aa15.33■□□□□ 0.04
TRIM54-202ENST00000380075 LYRM7Q5U5X0 104 aa15.33■□□□□ 0.04
TRIM54-202ENST00000380075 C10orf126Q8N4M7 172 aa15.33■□□□□ 0.04
TRIM54-202ENST00000380075 A0A0J9YXY3 114 aa15.32■□□□□ 0.04
TRIM54-202ENST00000380075 F8W1H4 67 aa15.32■□□□□ 0.04
TRIM54-202ENST00000380075 RPL24P83731 157 aaKnown RBP15.32■□□□□ 0.04
TRIM54-202ENST00000380075 NOTCH3Q9UM47 2321 aa15.32■□□□□ 0.04
TRIM54-202ENST00000380075 FAM19A3Q7Z5A8 133 aa15.31■□□□□ 0.04
TRIM54-202ENST00000380075 MGAM2Q2M2H8 2515 aa15.31■□□□□ 0.04
TRIM54-202ENST00000380075 GAGE7O76087 117 aa15.31■□□□□ 0.04
TRIM54-202ENST00000380075 GAGE12FP0CL80 117 aa15.31■□□□□ 0.04
TRIM54-202ENST00000380075 GAGE12GP0CL81 117 aa15.31■□□□□ 0.04
TRIM54-202ENST00000380075 GAGE12IP0CL82 117 aa15.31■□□□□ 0.04
TRIM54-202ENST00000380075 SBSPONQ8IVN8 264 aa15.31■□□□□ 0.04
TRIM54-202ENST00000380075 GAGE12JA6NER3 117 aa15.3■□□□□ 0.04
TRIM54-202ENST00000380075 APOMO95445 188 aa15.3■□□□□ 0.04
TRIM54-202ENST00000380075 GAGE4Q13068 117 aa15.3■□□□□ 0.04
TRIM54-202ENST00000380075 GAGE5Q13069 117 aa15.3■□□□□ 0.04
TRIM54-202ENST00000380075 GAGE13Q4V321 117 aa15.3■□□□□ 0.04
TRIM54-202ENST00000380075 TSPAN13O95857 204 aa15.29■□□□□ 0.04
TRIM54-202ENST00000380075 CFC1BP0CG36 223 aa15.29■□□□□ 0.04
TRIM54-202ENST00000380075 CFC1P0CG37 223 aa15.29■□□□□ 0.04
TRIM54-202ENST00000380075 HERVK_113P63121 156 aa15.29■□□□□ 0.04
TRIM54-202ENST00000380075 NTM-AS1Q6ZSK4 140 aa15.29■□□□□ 0.04
TRIM54-202ENST00000380075 NDUFA12Q9UI09 145 aa15.29■□□□□ 0.04
TRIM54-202ENST00000380075 TRAV8-3A0A0A6YYJ7 113 aa15.29■□□□□ 0.04
TRIM54-202ENST00000380075 OXLD1Q5BKU9 147 aa15.29■□□□□ 0.04
TRIM54-202ENST00000380075 H7C423 109 aa15.28■□□□□ 0.04
TRIM54-202ENST00000380075 ZFAND6Q6FIF0 208 aa15.28■□□□□ 0.04
TRIM54-202ENST00000380075 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.27■□□□□ 0.03
TRIM54-202ENST00000380075 TRGV4A0A0C4DH28 118 aa15.27■□□□□ 0.03
TRIM54-202ENST00000380075 TMEM243Q9BU79 118 aa15.27■□□□□ 0.03
TRIM54-202ENST00000380075 PRO1854Q9UHT4 67 aa15.27■□□□□ 0.03
TRIM54-202ENST00000380075 A0A0B4J2C4 111 aa15.26■□□□□ 0.03
TRIM54-202ENST00000380075 SPINK8P0C7L1 97 aa15.26■□□□□ 0.03
TRIM54-202ENST00000380075 LINC00694P0DN24 101 aa15.26■□□□□ 0.03
TRIM54-202ENST00000380075 C9orf66Q5T8R8 295 aa15.26■□□□□ 0.03
TRIM54-202ENST00000380075 H3BMG7 143 aa15.25■□□□□ 0.03
TRIM54-202ENST00000380075 KIR2DL5BQ8NHK3 375 aa15.25■□□□□ 0.03
TRIM54-202ENST00000380075 SPANXDQ9BXN6 97 aa15.25■□□□□ 0.03
TRIM54-202ENST00000380075 SPANXCQ9NY87 97 aa15.25■□□□□ 0.03
TRIM54-202ENST00000380075 CDKN2A-AS1Q9UH64 79 aa15.25■□□□□ 0.03
TRIM54-202ENST00000380075 A4D1N5 150 aa15.25■□□□□ 0.03
TRIM54-202ENST00000380075 G3V4G9 280 aa15.25■□□□□ 0.03
TRIM54-202ENST00000380075 RNF151Q2KHN1 245 aa15.25■□□□□ 0.03
TRIM54-202ENST00000380075 MUSTN1Q8IVN3 82 aa15.25■□□□□ 0.03
TRIM54-202ENST00000380075 UBE2L6O14933 153 aa15.24■□□□□ 0.03
TRIM54-202ENST00000380075 TIMM17BO60830 172 aa15.24■□□□□ 0.03
TRIM54-202ENST00000380075 LITAFQ99732 161 aa15.24■□□□□ 0.03
TRIM54-202ENST00000380075 LINC00242Q5T6M2 205 aa15.24■□□□□ 0.03
TRIM54-202ENST00000380075 TMEM101Q96IK0 257 aa15.24■□□□□ 0.03
TRIM54-202ENST00000380075 CDC42SE2Q9NRR3 84 aa15.24■□□□□ 0.03
TRIM54-202ENST00000380075 SMIM9A6NGZ8 99 aa15.23■□□□□ 0.03
TRIM54-202ENST00000380075 FHL2Q14192 279 aa15.22■□□□□ 0.03
TRIM54-202ENST00000380075 LINC00612Q8N6U2 182 aa15.22■□□□□ 0.03
TRIM54-202ENST00000380075 IGLV5-39A0A0G2JS06 123 aa15.22■□□□□ 0.03
TRIM54-202ENST00000380075 NDUFA1O15239 70 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms